Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F2 I0 R1
|
122 |
5985.5 |
7364544 |
98.3% |
7239346 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,394,287 |
T→G |
16.3% |
N115T (AAC→ACC) |
chuS ← |
hematinate‑forming heme oxygenase ChuS |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,394,287 | 0 | T | G | 16.3%
| 319.4
/ 15.1
| 196 | N115T (AAC→ACC) | chuS | hematinate‑forming heme oxygenase ChuS |
| Reads supporting (aligned to +/- strand): ref base T (73/86); new base G (35/2); total (108/88) |
| Fisher's exact test for biased strand distribution p-value = 9.95e-09 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 209 total aligned reads displayed.
CGTATTCTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTA > NZ_CP022686/2394148‑2394423
|
ggTATTCTCTTCGGTCATAAACCGTGCCAGAAGCGCCCTCCATGCCGCCATATCGGTCCTGTCGGTGGCATACACTTATTGTAATGCATCGCCCTGATGATCAAAGAACTGAATTCTCTGGCTTTCGCCACGAGCCgtgt < 8:755707/139‑1 (MQ=255)
cgTATTCTCACCTGTGATAAACCGTGCCAGAAGCTCACTCCCTGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCgtgt < 4:401192/140‑1 (MQ=255)
tATTCTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGttt > 2:348671/1‑140 (MQ=255)
cATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCtt < 6:489530/138‑1 (MQ=255)
aTCGGTGATAAACCGTGCCAGAATCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTCGCGTTCGCCACGCGCCGTGTTTTAtttta > 7:216611/1‑138 (MQ=255)
aTCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGgtttgttttt > 3:875610/1‑138 (MQ=255)
aTCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACAATGGCGTTCGCCACGAGCCGTGGtttgtttgt > 3:499616/1‑139 (MQ=255)
aTCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGAGGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTAGTTGa > 2:687373/1‑140 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGATTACTCTGGCGTTCGCCACGCGCCGTGTTTTCTTTTA‑t > 8:705607/1‑140 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCt > 8:643678/1‑135 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCGCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTg < 6:749396/138‑1 (MQ=255)
cGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGTtttgtttgt > 6:381783/1‑137 (MQ=255)
ggTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATAATCTGGCGTTCGCCACGAGCCGtgttttgttttgt > 6:803800/1‑135 (MQ=255)
tGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTTA‑TGTgg > 4:648452/1‑140 (MQ=255)
tGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTGTTA‑TGTgg > 7:783866/1‑140 (MQ=255)
gATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGtttatttta‑tttt > 6:715548/1‑135 (MQ=255)
aTAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGaa < 3:315079/140‑1 (MQ=255)
aaCCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGA‑TGTGGAAAac > 3:919898/1‑140 (MQ=255)
aaCCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTAGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTGA‑TGTGGgaa > 5:507796/1‑138 (MQ=255)
cccGTGCCAGAAGCTCACTCCATGCCGCCATATCGGAATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGACCTGAAAACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAaca < 3:267950/139‑1 (MQ=255)
aCCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGGTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAaca < 4:743815/140‑1 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGT‑TGTGGAAAACACTgg > 4:913423/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑t < 4:269878/126‑1 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACt < 5:809250/138‑1 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTgg < 8:245078/140‑1 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTgg > 2:770260/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTgg > 4:853448/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGATTGTGG‑AAACACTgg > 7:687230/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGA‑TGTGGAAAACACTgg > 1:802783/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTATTTTA‑TTTGGATAACACttg > 1:353528/1‑138 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATAATCTTGCGTTCGCCACGAGCCGTGTTTTAGTTGA‑TGTTGCAAAAACTgg > 7:72775/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGGGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGCACTGAATACTCTGGCGTGCGCCACGCGCCGTGTTGTGTGTGA‑TGTGGAAAacccggg > 2:899054/1‑135 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGA‑TGTGGTAAACACggg > 6:701291/1‑138 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGA‑TTTGGTAAACACAgg > 5:197648/1‑138 (MQ=255)
cACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTTA‑TGTGGAAAACACAGGCCCattgattt > 1:926841/1‑139 (MQ=255)
cACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGA‑TGGGGGAGACACTGGCCCattgattg > 8:602340/1‑140 (MQ=255)
cTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGtttt < 6:262067/106‑1 (MQ=255)
cTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGtttt > 5:262067/1‑106 (MQ=255)
cTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTTA‑TGTGGGAAACACCTGCCCACTTCTTgag > 7:623018/1‑140 (MQ=255)
ttccgcgATTTAGGTATTGTCGGGTGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACa < 4:875568/138‑1 (MQ=255)
tGCCGCCATCTCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACa < 4:105493/140‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTTA‑TGTGGAAAACCCTGGGCCATTGATTTAGaaaaa > 1:823453/1‑138 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGaaa < 6:14492/138‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACa < 7:488300/140‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACa < 7:554484/140‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACa < 1:390313/140‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACa < 3:472385/140‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATCCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTGCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACa < 4:246111/140‑1 (MQ=255)
gccATAGCGGTATGGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGACCTGAATACTCTGGCGTTCGCAACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTTGCCCATTGATTGAGAAACAGACg < 2:252043/140‑1 (MQ=255)
cATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCCTCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TTTGGAAAAAACTGGCCCATTGATTTAGCAAAAGACCTa > 2:927297/1‑140 (MQ=255)
cATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTGT‑TGTGGAAAACACAGGCCCAATGATTGAGAAACAGCCGTa > 8:334468/1‑140 (MQ=255)
cATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCACTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGTTTTATTTGA‑TGAGGAAAAAAATGTCCGAATGAATGATCAACAGACgca > 8:369653/1‑138 (MQ=255)
ggTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGaaaa > 6:105414/1‑104 (MQ=255)
aTTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGT‑TTTGGTAAACGCTGGGCCAGGGATTTTGAAACAGACGGCAATcccccc > 7:700614/1‑136 (MQ=255)
gTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGTGTTCGCCACGAGCCGTGTTTTATTTGA‑TGTGGAAAAAACTGGCCCAATGATAGAGAAAAACCAGTAAAAACAgcgc > 6:397863/1‑138 (MQ=255)
tCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGA‑TGTGGTAAACACTGGCCCAGTGATTGAGAAACCGCCGTAAATCCAgcccgcg > 4:17056/1‑140 (MQ=255)
tCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAgcgcgcg < 1:160506/140‑1 (MQ=255)
tCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTGCGCCACGAGCCGTGGTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGAGTGAGAAACAGACGTAAATCCAgcgcgcg < 2:10292/140‑1 (MQ=255)
gcGGTTGCATAAACTTTTAGTAAGGCATCTCCCTTATTATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑GGTGGAAAACACGGGCCCATTGATTGAGAAACAGACGTAAATCCAgcgcgcg < 7:851209/139‑1 (MQ=255)
ggTGGCATAAACTTTTAGTAATGCAGCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAgcgcgcg < 5:305109/138‑1 (MQ=255)
tGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGGTTTAGTTGA‑TGTGGTAAACAAACGGCCAATTATTGAGAAACAAACGTAAAACAAGCGCGCGCCGa > 2:809416/1‑140 (MQ=255)
ggCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTTATAAACAGACGTAAATCCACCGCGCGCGGAt > 4:699753/1‑140 (MQ=255)
ggCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTAGTTTA‑TGTGGAAAACCCTGGCCCATTTATTGAGAAACAGACGTAAAACCAGCGCGCGCGGAt > 2:383316/1‑140 (MQ=255)
gCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGT‑TGTTGTAAACACAGGCCCAATGTTTGAGAAACATACCTAAATCCACCGCGCCCGGGtt > 3:298517/1‑140 (MQ=255)
cttAATCTTTTTGTAATGCATCGACCTGATGATCCTAGAACTGAATCCTCTGGCGTTCGGCACGAGCCGGGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAATCCGACGTACCTCCAGCGCGCGCGGAt < 6:91417/136‑1 (MQ=255)
cATATACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGAt < 5:730578/138‑1 (MQ=255)
cATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAAATGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGA‑TGTGGAAAAAACTGGCCCATATATTGAGAAAAAGACCTAAATCCAACCCCCGCGGaa > 5:320527/1‑137 (MQ=255)
acatttAGTAATCCATCGCCCTGAAGCTCAAAGAACAGACTACTCTGGCGTTGGCCACGAGCCGTGTGTTCTTTGA‑TGTTGAAAACACTGGCCCAGTGATTGAGAAACAGACGTAAATCCAGCCCGCGCGGATTGAgg < 6:354560/135‑1 (MQ=255)
cTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGGGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATc < 4:44616/140‑1 (MQ=255)
ttAGTAATGCCTCGCCCTGATGATCACAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAAt < 4:932125/140‑1 (MQ=255)
aGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGGTTGA‑TGTTGACAACCCTTGCCCAGTGGGTGAGAACCAGACCTAAATCCAGCGCGCGCGGGTTTAGGATCAATcc > 4:521176/1‑140 (MQ=255)
aTCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTc < 7:243063/140‑1 (MQ=255)
aTCGCCCTGATCATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTc < 4:313286/140‑1 (MQ=255)
cGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTTA‑TGTTGAATAAACTGGCCCAATGATTTAGAAACATACCTAAATACAGCGCGCGCGGATTGATGATCAATCCGGCATGTACg > 7:379961/1‑140 (MQ=255)
cccTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTTATTGA‑TTTGGAAAAAACAGGCCCATTGATTTAGAAAAAAACGTAAAAACACAGCGCGCCGATTGAGGATAAATAAGGCAtttacggt > 8:684567/1‑133 (MQ=255)
catgattaTCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGt < 5:776877/136‑1 (MQ=255)
atCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCTGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATg < 5:430881/138‑1 (MQ=255)
atCAAACAACTGAATACTCTGGCATTCGCCACGAGCCGTGTTTTCTTTTA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGAGTGAGGATCAATCCGGCATGTCCGTTCAAATGCt < 7:513586/140‑1 (MQ=255)
cAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTTAGAAACAGACGTAAATACAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTAAAATGCTgg > 2:576694/1‑140 (MQ=255)
aGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTGA‑TTTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATACGGCATGTGCGTTAAAATGCTGGttt > 4:41419/1‑140 (MQ=255)
cTGAATACTCTGGCGTTCGCCCCGAGCCGTGTGTTGTTTTA‑TGTGGGAAACACAGGCCCAAGGATTGAGATACAGACGTAAAACAACCGCGCCCGCAGTGAGGTTAAATACAGCCTGTCCTGTGGAATGCTGGttttt > 6:43317/1‑136 (MQ=255)
caaTACTCTGGCGTTCGCGACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGa < 5:34058/137‑1 (MQ=255)
aaTACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGA‑TGTGGAAAACACAGGGCCCGTGATTGAGGAACAGACCTAAATCCAGCGCGCGCGGATTGAGGGTGAATACGGCAGGTGCGGTAAAATGCTGGGTTGTGAACg > 2:478967/1‑140 (MQ=255)
tACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCa < 3:383617/140‑1 (MQ=255)
aCTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCAc < 8:159375/140‑1 (MQ=255)
tGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCTCGCGGATTGAGGATCAATCCGGCATGTCCGTTGAAATGCTGGGTTTTGGACGCACCCAc > 2:33702/1‑140 (MQ=255)
tGGCGATCGCCACGAGCCGTGTTTTCTATGA‑TGTGGAAAACAATGTAACAATTATTGATAAACAAACGAAAAACCAACGCCCGCAGAATGAGGATCAATAAGGCATGTCCTTTCAAAATCTGGTTAGTCTACTCAccc > 6:844521/1‑137 (MQ=255)
ggcgagcGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGATACAGACGTAAATGCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAACTGCTGGTTTGTGAACGCACCAACt < 1:23309/134‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATGCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 1:809416/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 3:648452/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 4:619870/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 7:473809/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCAATGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 6:547714/138‑1 (MQ=255)
cGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCa < 2:36279/140‑1 (MQ=255)
ccACGAGCCGTGTTTTGTTTGA‑TTTGGTAAACACTGGGCCATTTTATTATTAACAGGAGGAAATACAGCGCGCGCGGATTGAGGGTCAATACGGCATGTCCGTTGAAATGCTGGGTTGTGTACGCCCCAACATGttga > 6:30626/1‑136 (MQ=255)
cGAGCCGGGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATAGAGAAACCGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTGCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGAc < 8:581046/140‑1 (MQ=255)
gAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACt < 8:403961/140‑1 (MQ=255)
gAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCAGGTCCGTTCAAATGCTGGGTTGTGAACGCACCAACTTGTTCATGGACt < 8:233254/140‑1 (MQ=255)
gtgtTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTa < 2:170774/140‑1 (MQ=255)
gtgtTTTCTTTGA‑TGTGGAAAACACTGGCACATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCAGGCATGTCCGTTCAAATGCTGGTTTGTTAACGCACCAACTTGTTCATGGACTGCGTa < 1:718418/140‑1 (MQ=255)
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CGTATTCTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGA‑TGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTA > NZ_CP022686/2394148‑2394423
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
