Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F35 I0 R1
|
157 |
6985.9 |
8006972 |
98.3% |
7870853 |
134.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,394,287 |
T→G |
24.5% |
N115T (AAC→ACC) |
chuS ← |
hematinate‑forming heme oxygenase ChuS |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,394,287 | 0 | T | G | 24.5%
| 280.9
/ 44.5
| 215 | N115T (AAC→ACC) | chuS | hematinate‑forming heme oxygenase ChuS |
| Reads supporting (aligned to +/- strand): ref base T (60/97); new base G (53/4); total (114/101) |
| Fisher's exact test for biased strand distribution p-value = 7.08e-14 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 219 total aligned reads displayed.
CTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACT > NZ_CP022686/2394154‑2394418
|
ctcATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGtttta > 3:742198/1‑137 (MQ=255)
tctgTGATAAACAGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGCGGGCATAAACTTTTAGTAATGCATCGCCCTGATGATAAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGAt < 7:569865/137‑1 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGtgttttg‑tttt > 1:784403/1‑137 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGtgttttg‑tttt > 2:1004476/1‑137 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCAGCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTg < 5:865915/138‑1 (MQ=255)
cGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGgtttaatttg > 5:16484/1‑132 (MQ=255)
cGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTC‑GTTgt > 2:130781/1‑137 (MQ=255)
ggTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGAttt > 7:464598/1‑138 (MQ=255)
ggTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGAGGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGttta‑ttttat > 6:182671/1‑138 (MQ=255)
taTAACCCGTGCCAGAAGCGCACTCCCTGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAAGGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGAtgtg < 5:332570/137‑1 (MQ=255)
cccGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGGTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGaaaa < 4:398048/137‑1 (MQ=255)
ccGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑tt < 5:419188/125‑1 (MQ=255)
ccGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑tt > 6:419188/1‑125 (MQ=255)
cGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAaca < 4:444426/138‑1 (MQ=255)
tGCCAGAAGCTCACTCCATGCCTCCATATAGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGCATCCTCTGGCGTTCTCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACt < 4:896321/138‑1 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGTCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTA‑TTTGATTTGGAAAAAACAgg > 7:597420/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGCTGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGGTGG‑TTTGATGTGGAAAaccag > 2:88082/1‑135 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGTTTTA‑TTTGATGTGGAAAACACTgg > 8:870639/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTG‑TTTTATTTGGTAAACACTgg > 8:529013/1‑140 (MQ=255)
gCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTG‑TTTTATGTGGAAAACACTg > 1:530454/1‑138 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGATTACTCTGGCGTTCGCCACGAGCCGTGGTTTC‑TTTGATGTGGAAAACACTgc > 4:309718/1‑137 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGTTTTA‑TTTGATGTGGTAAACACTgg > 3:153504/1‑138 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGGTTTG‑TTTGATGTGGATAAAACTgg > 2:691590/1‑138 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTG‑TTTGATTTGGTAAAGACttg > 3:873928/1‑136 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTG‑TTTGATTTGGAAAACCCttg > 1:557501/1‑136 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTgg < 4:483495/138‑1 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTgg > 4:267717/1‑138 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTA‑TTTGATGTGGAAAACACTgg > 3:887457/1‑138 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTA‑GTTGATGTGGAAAAAACAgg > 2:995107/1‑138 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTG‑TTTTGTGTGGTGAACACTgg > 1:74545/1‑138 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTC‑TTTGATGTGGAAAACACAgg > 2:459598/1‑138 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTGCGCCACGAGCCGTGTTTTG‑GTTGATGTGGAAATCCCTgg > 6:974764/1‑138 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCACATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTA‑TTTGATGTTGTAAACACTgg > 6:953716/1‑138 (MQ=255)
gCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCattga < 7:860692/140‑1 (MQ=255)
cACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCAGCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGGGTTA‑TTTGATGTGGAAAAAACAGGCCCattgattt > 7:700905/1‑139 (MQ=255)
cTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTG‑TTTGATGTTGTAAAAACTGGCCCctagattt > 3:990966/1‑137 (MQ=255)
cATGACGACAAATCGGTTTTGTCTGTTGCATAAACTTTTATTAATTCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCTCCACGAGCCTTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTgaga < 3:829160/138‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCTGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGaaa < 3:451698/138‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGaaa < 3:331792/138‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACAGGCCCATTGATTGAGAAACa > 8:247993/1‑140 (MQ=255)
cgccATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGTTTTG‑TTTGATGTGGAAAACACAGGCCCCTTGATTGAGaaaaaa > 5:722794/1‑135 (MQ=255)
cgccATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTG‑TTTGATGTTGAAAACCAAGGCCCAATGATTGAGAAACac > 4:155907/1‑137 (MQ=255)
cATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTC‑TTTGATGTTGTAAACACTGGCCCAATGATTTTGAAACAGACCTa > 7:316131/1‑140 (MQ=255)
tatCGGTATTGTCGGTGGCATAATCTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGTTATC‑TTTTATGTGGTAAACACTGGCCCAATGATTTTGCAACAGACGtt > 3:361984/1‑137 (MQ=255)
tatCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTG‑TTTGATGTGGAAAACACTGGGCCAATGATTGAGCAAAAGTCGTa > 4:579205/1‑138 (MQ=255)
tatCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTA‑TTTGATTTGGAAAACACTGGCCCCATGATTGTGAAACAGACgaa > 1:852017/1‑136 (MQ=255)
tatCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTG‑TTTGTTGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTa > 6:270173/1‑138 (MQ=255)
tCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTA‑TTTGTTGTGGAAAACACGGGCCCATTTATTGTGAAAAAGCCGTaaa > 1:108495/1‑138 (MQ=255)
aTTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAg < 5:279279/138‑1 (MQ=255)
gTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTG‑TTTGATGTGGAAAAAAATGGCCCATTGATTGAGAAAAAAACCTAAATCCAgccc > 1:442953/1‑136 (MQ=255)
tCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAgcgcg < 4:757950/138‑1 (MQ=255)
tCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAgcgcg < 2:265644/138‑1 (MQ=255)
tCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTA‑TTTGATGTGGAAAACACTGGCCCATTGATTGTGAAACAGACGTATATACAgcgcccc > 8:594892/1‑137 (MQ=255)
ggTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAgcgcgcg < 6:770745/138‑1 (MQ=255)
ggTGGCATAAACTTATATTAATGCATCGCCCTGATGATCAAAGAACAGAATACTCTGGCGTTCGCCACGAGCAGTGGTTTC‑AATTATGTAGAAAACACCTGCCACGTGAAGGACAAACAAGCGTAAAAACAgcgcccc > 6:575182/1‑135 (MQ=255)
ggTGGAATAAACTTTTAGTAATGCAGCGCCCTGATCATCAAAGAACTGAATACTCTGGCGGTCGCCACGAGCCGTGTTTTC‑TTTGATGTGTAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAgcgcgcg < 6:919756/138‑1 (MQ=255)
gCATAAACTTTTAGTAATGCATCGCCCTGATGATCACAGAACTGAATACTCTGGCGTTAGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGa < 6:111182/138‑1 (MQ=255)
cATAAACTTTTATTAATGCATCGCCCTGCTGATCAAAGAACTGAATACAATTGCGTTCGCCCCGAGCCGAGTTTTCATTAGATG‑GGTAAACACATGCCCAATGAGAGAGAAACACTCGAAAATACAGCGCGCGCCGag > 6:775954/1‑137 (MQ=255)
cATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTA‑TTTTATGTGGAAAAAACTGTCCCATTGATTGTGTAACATACGTAAATACATCGCGCGCGGAt > 3:242996/1‑138 (MQ=255)
cATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTG‑ATTGATGTGGAAAACCCCGGCCCCATGATTGTGAAAACCACGTAAAACCACCGCGCCCCGAt > 5:526651/1‑138 (MQ=255)
cATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTC‑TTTGATGTTGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGAt < 2:273967/138‑1 (MQ=255)
cATAAACTGTTAGTAATGCATCGCCCTGAAGATCAAAGAACTGAATACTCTGGCGTGCGCCACGAGCCGTGGTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGAt < 2:799980/138‑1 (MQ=255)
tAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTG‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATACAGCGCGCGCGGATTg > 2:334784/1‑138 (MQ=255)
cTTTAAGTAATGCAGCTCCCTGATGATCAAAGAACTGAATACTGTGGCGTTCGCCACGAGCCTTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGAGTGAGGATc < 7:558096/140‑1 (MQ=255)
tAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCgg < 8:464598/140‑1 (MQ=255)
cATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGTAGGGGAAAACACTGGCCCCTTGATTTAGAAAAAGACCTAAAACACGCGCGCGCGGATTGAGGGTCAAACCGGCAt > 1:245819/1‑138 (MQ=255)
cATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGa < 3:569842/119‑1 (MQ=255)
cATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTA‑GTTTATGTTGAAAACAAAGGCCCCTTGATTGTTAAAACCTCGTAAATACAGCGCGCGCGGCTTGAGGGTCAATCCGGcct > 2:399105/1‑136 (MQ=255)
aTCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTT‑TTTTATGTGGAAAAAACAGGGCCATAGATTTTGAAACAGACGTAAATACACCCCGCGCGGATTGAGGATAAAAACGGcctt > 3:690472/1‑135 (MQ=255)
aTCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑GTTGATGTGGAAAAAACTGGCCCATTGATTGATAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATAAGGCAtt > 2:647628/1‑137 (MQ=255)
tcgaacTGATGATCAAAGAACTTAATACTCTGGCGTTCGCCACGAGCCTTGGTTTA‑TTTTATTTGTAAAACACTGGACCATTGATTTAGAAACAAACCAAAATACAGCGCGACCGGATTAAGTCTAAAACCGCCATGTcc > 8:927242/6‑140 (MQ=255)
gCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTC‑TTTGGGGTGGAAAACACAGGGCCAGTGATTTAGATACAGGAGTAAATCCAGCGCGCGCGGAGTGCGGCTGAATACGGCATGTcc > 6:348706/1‑138 (MQ=255)
cccTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTG‑TTTGATGTGGAAAACACGGGGCCATTGTTTGAGAAACAGACGTAAATACAGCGCGCGCGGTATGAGGATCAATCCGGCATGTACg > 5:12442/1‑138 (MQ=255)
ccTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGt < 6:234191/138‑1 (MQ=255)
tgatgaTCAAATAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTc < 5:239975/138‑1 (MQ=255)
gatCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTTATTGAGAAACATACGTAAATCCAGCCCGCGCGGATTGATGATCAATCCGGCATGTACGTTCAAAt > 6:167254/1‑138 (MQ=255)
cAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTG‑TTTGTTGTGGAAAACACGGGCCCATTGATTGAGAAACAGACGGAAATACCCCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCt > 2:357618/1‑138 (MQ=255)
aaGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTA‑TTTTATGTGGTAAAAACTGGGCCCTTGTTTTTTAAAAAGACGTTAATACAGAGCGCGCCTCTTTAGGATGAATCACTGATTTCCGTTCaaaatcttg > 1:667357/1‑132 (MQ=255)
aGAACTGAATACTCTAGCGTTCGCCACGAGCCGTGGTTTG‑ATTGATGTGGAAAACACTGGCCCAATGAATTAGCAACCGACCTAAATACAGCGCCCCCGGACTGATGATCAATCCGGGAGAGCCGGTGAAATGCTGGttt > 8:611961/1‑140 (MQ=255)
aCTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTtg < 1:357030/138‑1 (MQ=255)
gAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGGCCGTTCAAATGCTGGTTTGTGa < 4:643992/138‑1 (MQ=255)
tACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCa < 8:730787/140‑1 (MQ=255)
aCTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGc < 1:645276/138‑1 (MQ=255)
ctctGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCa < 3:477770/138‑1 (MQ=255)
tGGCGTTCGCCACGAGCCGTGTTTTG‑TTTTATGTGGGAAACCCGGGCCCCTTGATTGAGCAACAGACGTAAATCCCGCGCGCGCGGATTGTGGCAAAATACGGCCTGTCCGGTCAAATGCTGGGTTGTGGACGCCCCCAc > 8:499030/1‑140 (MQ=255)
tGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCa < 4:421247/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 3:993963/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 2:179131/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 1:190011/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 3:12081/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 5:738636/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 7:247993/140‑1 (MQ=255)
gCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGGCCATTGATTGAGTAACAGACGTAAATCCCGCGCGCGCGGATTGAGGCTCAATCCCGCATGTCCCTTCAAATGCTGGTTTGTGAACGCACCAAc > 4:134369/1‑138 (MQ=255)
cGCCACGAGCCGTGTTTTG‑TTTGATGTGGAAAACACTGGCCCATTTATTGAGAAACAGACGTAAATACAGCGCGCGCGGCTTGAGGATCAATCCGGCATGGCCGTTAAAATGCTGGTTTGTGAAAGCCCCAACTTGtt > 6:642052/1‑138 (MQ=255)
ccACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATg < 8:358526/140‑1 (MQ=255)
cACGAGCCGTGTTTTC‑TTTGATGTGGAAAACTCTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCAt < 2:1030499/138‑1 (MQ=255)
cACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGaaa < 3:802708/52‑1 (MQ=255)
cACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGaaa > 4:802708/1‑52 (MQ=255)
aCGAGCCGTGTTTTC‑TTTGCTGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATg < 6:300239/138‑1 (MQ=255)
aCGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATg < 5:21929/138‑1 (MQ=255)
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CTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTC‑TTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACT > NZ_CP022686/2394154‑2394418
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
