Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F35 I0 R1
|
195 |
10216.4 |
8585726 |
98.3% |
8439768 |
135.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,394,287 |
T→G |
15.7% |
N115T (AAC→ACC) |
chuS ← |
hematinate‑forming heme oxygenase ChuS |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,394,287 | 0 | T | G | 15.7%
| 365.9
/ 27.8
| 233 | N115T (AAC→ACC) | chuS | hematinate‑forming heme oxygenase ChuS |
| Reads supporting (aligned to +/- strand): ref base T (81/109); new base G (39/2); total (121/112) |
| Fisher's exact test for biased strand distribution p-value = 1.05e-10 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 240 total aligned reads displayed.
CGTATTCTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTA > NZ_CP022686/2394148‑2394423
|
cgTATTCTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCgtgt < 2:530067/140‑1 (MQ=255)
cATCGGTGATAACCCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGGCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACGCTGGCGTTCGCCACGAGCCGTGTTTTCTTTg < 7:628841/140‑1 (MQ=255)
cATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCtt < 5:923621/138‑1 (MQ=255)
cATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTg < 8:415716/140‑1 (MQ=255)
tCGTTGATAAACCGTGCCAGATGCTCTCTCCATGCCGCCATATCGGTATTGTGGGTGGCATTAACTTTTAGTAATGCATGGCCCTGATTATCAAAGAACTGAATACTCTGGAGTTCGCCACGAGCCGTGTTTTCTTTGAt < 4:239627/140‑1 (MQ=255)
tCGGTGATAAACCGTGGCTGAAGCTCACTGCATGACGCCATTTCGGTTTTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTTATGATCAAATTACTGAATACTCTGGCGTTCGCAACGAGCCGTGTTTTCTTTg < 5:338351/138‑1 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATTAACTTTTAGTAATGCATCGCCCTGATGATCAAATAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGAt < 3:752511/140‑1 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGAt < 1:405734/140‑1 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGAt < 2:1011064/140‑1 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGtttattttat > 1:755949/1‑140 (MQ=255)
cGGTGATAAACCGTGCCAGAAGCTGCCTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTGTCGTTgt > 6:375918/1‑137 (MQ=255)
cGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTACGCCACGAGCCGTGTtttgtttgt > 5:833150/1‑137 (MQ=255)
ggTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTGAt > 6:856168/1‑138 (MQ=255)
ggTGATAAACCGTGACAGAAGCTCACTCCATGCCGCAATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGTTTTGTTTGAt > 6:598673/1‑138 (MQ=255)
tGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATTTgg > 3:716257/1‑140 (MQ=255)
gATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGa < 2:732371/140‑1 (MQ=255)
gATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGa < 7:575604/140‑1 (MQ=255)
gATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTATTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGa < 1:778867/140‑1 (MQ=255)
aCCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGaaaa < 5:1012086/138‑1 (MQ=255)
cGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACt < 4:632340/140‑1 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGTCATAAAATTTTAGTAATGCAGCGCCCAGATGATCAAAGAACTGAATACTCTTGCGTTCGCCAAGAGCCCTGATTTATTTGATGTGTACAacccagg > 4:551795/1‑135 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGTGGGAAACACTgg > 1:113615/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGTGGCAAacccagg > 7:542217/1‑135 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTATTTGATGTGGAAAacccagg > 4:342108/1‑135 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGGGGCATAAACGTGTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGTGTTATTTGATGTGGAAAACACggg > 4:387767/1‑140 (MQ=255)
tGCCAGAAGCTAACTCCATTCAGCCATATCGGTATTGTCGTTGGCATAAACTTTTAGTAATGCATCGCCCTGATTATCAAAGAACTGAATACTCTGGCGTTCTCCACGAGCCGTGTGTTGTTTGTTGTGGAAAaaacatg > 1:669261/1‑137 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTTGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCTCCACGAGCCTTGTTTTCGTTGATTTGTGAAacacatg > 5:22760/1‑135 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTGTTTTGTTGTGTGGTAAACACTgg > 5:544526/1‑138 (MQ=255)
gCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGTGGAAAACACAGGCCCaatgt > 8:570029/1‑139 (MQ=255)
gCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGACACGAGCCTTGTGTTATTTTATGTGGAAATCACTGGCCCattgt > 2:151136/1‑139 (MQ=255)
aatacATGACCCCATATATGTATAGTCGTTGGCATATAGTTTTAGTAATGCATCGCCCTGATGATCAAAGAAATGAATACTCTGGCGATCTCCACGAGCCGTGTTTTATTTTATTGGGGATACCCTTGCCCattgattgt > 4:726099/5‑139 (MQ=255)
aCTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTGTTCTGTTATGTTGGAAAAACTGGCCCattgattgt > 3:1008871/1‑139 (MQ=255)
cATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGaaa < 8:111441/140‑1 (MQ=255)
ttcctccATATCGGTATTGTCTGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGAGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGaaa < 5:391903/133‑1 (MQ=255)
tGCCGCCTTATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACa < 8:884378/140‑1 (MQ=255)
tGCCGCCATATCTGTATTGTAGGTGGCATAAAGTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTGCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACa < 2:796002/140‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGCAAACACGGGCCCATGTATTGAGAACCa > 8:630213/1‑140 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACa > 3:569968/1‑140 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACa < 8:946668/140‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTTTTGTGGAAAAAACTGGCCCCTTTTTTTAGaaaaa > 7:25768/1‑138 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGATTTGGAAAACACAGGCCCCATGATTTAGaaaaa > 3:322406/1‑138 (MQ=255)
gccgccATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGATGTGGAAAACACTGGCCCATTGTTTGAGaaaaac > 2:226998/1‑137 (MQ=255)
ccgccATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGTGGCAAACACTGGCCCATTTATTGAGCAACa > 6:568753/1‑138 (MQ=255)
tatCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGATTTGGAAAACACAGGCCCATTGATTGAGAAACAGACGTaaa > 2:1051721/1‑140 (MQ=255)
gTCGGTGGCATAAACTTTTATTACTGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGCTTTATGTGGAAAACAAAGGCCCCATGATTGATAAACAGAAGTAAATAAAgcgcgc > 8:359824/1‑140 (MQ=255)
cGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGTTGTGGTAAACACGGGGCCGTTTTTTGTGAAACCGACGTATATCCAgcgccc > 6:268298/1‑136 (MQ=255)
gTGGCATAAACTTTTAGTAAGGCATCGCCCTGATGATCAAAGAACTGAATCCTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCgg < 3:158445/140‑1 (MQ=255)
ggCATAAACTTTTAGTAATTCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTGATTTTTAAAACACTGGCCCAATGATTTAGAAACAGAAGTAAAAACAGCGCGCGCGAAt > 8:799591/1‑140 (MQ=255)
ggCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCAATGATTGACAAACAGACGTAAATCCCGCGCGCGCGGAt > 4:917381/1‑140 (MQ=255)
ggCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTGATGTGGAAAACACGGGGCCCTTGATTTAGCAAAACACGTAAATACCGCGCCCGCGGAt > 2:282034/1‑140 (MQ=255)
ggCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTATTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACATACGTAAATTCAGCGCCCGCGGAt > 4:16035/1‑140 (MQ=255)
ggCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGACCCGTGTTTACTTTGATGTGGAAAACACTGGCCCCATGATTGATAAACAGACGGAAATACAACGCGCGCGGAt > 8:314575/1‑140 (MQ=255)
gCATAAACTTTAAGTAATGCAGCGCCCAGATGATCAAAGTCCTGACTACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGAtt < 8:504292/140‑1 (MQ=255)
cATAAACTTTTAGTAATTCATCGCCCTGATGATCAAACAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTg < 1:584677/140‑1 (MQ=255)
aaCTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAg < 5:671858/138‑1 (MQ=255)
aCTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGATGTGGAAAACACTGGCCCATTGATTGAGAAAAAGACGGAAATCCCGCGCGCGCGGATTGAgg > 6:236903/1‑138 (MQ=255)
aCTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTGCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGAt < 1:915114/140‑1 (MQ=255)
ctattattaATGCATCTCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTTATGTGGAAAACACTGTCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGa < 6:413469/135‑1 (MQ=255)
tttAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATc < 6:116733/138‑1 (MQ=255)
ttAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTATTTGATGTGGAAATAACTGGCCCATTTATTGAGAAACAGACGGTAATGCAGCGCGCGCGGTTTGGGGTTCAAt > 8:972332/1‑140 (MQ=255)
tAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGCCGTAAATCCAGCGCGCGCGGCGTGAGGGTCAATc > 4:50615/1‑140 (MQ=255)
aGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGTTGTGGTAAACACTGGCCCAATGATTGCTCAACAGACGTAAATAACGCGCGCCCCGATTGAGGAACAATcc > 3:784083/1‑140 (MQ=255)
tAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCgg < 4:114598/140‑1 (MQ=255)
aaTGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGc < 4:401762/140‑1 (MQ=255)
tGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGTTTTATTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAAACCAGCGCGCGCGGATTGAGGTTCAATCCGGCAt > 8:75692/1‑140 (MQ=255)
tGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGTGGTAAACAAATGGCCATTGTTTGAGAAAAAGAACTAAAAACACCGCCCGCGGATTGAGGATCAATCCCGCaa > 1:1068647/1‑139 (MQ=255)
gCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGTAAACACGGGGCCCTTGTTTGAGAAACAGCCGTAAATCACGCGCGCGCGGCTTGTGGGTCAATACCGCa > 6:1021660/1‑138 (MQ=255)
cATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTATCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGt < 3:458076/140‑1 (MQ=255)
aTCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGTTGTGGAAAACACTGGCCCATTGATTGAGAAAAACACGTAAAAACAGCGCGCGCGGATTGAGGATAAATCCGGCAtt > 6:880255/1‑137 (MQ=255)
aTCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATg < 5:815839/138‑1 (MQ=255)
gCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGt < 7:484745/140‑1 (MQ=255)
cTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGa < 1:1030399/140‑1 (MQ=255)
cTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGa < 4:876415/140‑1 (MQ=255)
aaTACTCTGGCGTTCGCCACGCGCCGTGGTTTGGTTGATGTGGGAAACACTGGGCCATTTGTTGTGGCACAGACCTAAATAACTCGCGCGCGGGTTGTGGTTGAATCCGGCAATTGCGGTAAAATGGTGGTAtgtgctag > 8:663222/1‑136 (MQ=255)
aaTACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTTTTTTGGTAAACACAGGGCCAATGATTTAGAAACAGACGTAAATCAAGCGCGCGCGGATTGAGGGTCAATCCGGGCTGTCCGTTCAATAGCAGGGTtgttctcg > 2:372902/1‑135 (MQ=255)
aaTACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACAGGCCCATTTATTGAGAAACAAACGCAAAGCCAGAGCGCGCCGATTTAGGTACAAACCGGGATGTACGGTAAAATTGTGGTTTTTGTAcc > 7:845868/1‑139 (MQ=255)
aaTACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGATGATAAATACGGCAAGTCCGTTCAAATGCTGGGTTGTGat > 6:768006/1‑137 (MQ=255)
tACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCa < 2:645909/140‑1 (MQ=255)
tGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGGAAACACTGGGCCATTGATTGAGAAAAAGACGTAAATCCAGCGCGCCCGGATGGAGGATGAATGCGGCATGTCCGGTGAAATGCTGGTTTGTGCTCGCACCacc > 8:579788/1‑138 (MQ=255)
tGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGATAACACGGGCCCATTGAGTGAGTAACAGACGTAAATCCAGCGCGCGCGGCTTGTGGGTGAATCCGGCATGGCCGGTCAAATGCTGGGTTTTTAACGCAccc > 6:201510/1‑137 (MQ=255)
tGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAAc < 3:401665/140‑1 (MQ=255)
tGGCGTTCGCCACGAGCCGTGGTTTATTTTTTGTGGAAAACACTGGCCCAATGTTTGAGAAACAGACGGAAATCCAGCGCGCGCGGAGTGAGGATCAATCCGGGATGTGCGTTCAAAAGCTGGTGTGTGAACGCCCCaaa > 8:613582/1‑139 (MQ=255)
ggcgcgcGCCACGAGCCGTGTTTTCTTTGATGTGGCAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGATCGCACCAACt < 1:810310/134‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGTAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCTGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 1:295341/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAACCAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 4:1024453/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCACTCCGGCATGGCCGTGCAAATGCTGGTGTGTGAACGCACCaa < 5:588614/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 3:544246/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 1:847158/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 3:733725/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 4:665034/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 3:916497/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 8:788281/140‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTCTGTGAACGCACCAACt < 1:282034/140‑1 (MQ=255)
cgCGTTCGCCACGAGGCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACt < 7:941099/139‑1 (MQ=255)
cGTTCGCCACGAGCCGTGTTTTCTTTGTTGTGGAAAACACAGGCCCATTGTTTGAGAAACAGACGTAAATCCAGCGCCCGCGGATTGAGGATCAAAACGGCAAGTCCGGGCAAATGCTGGTTTGTGAACGCACCAAcatt > 8:226824/1‑137 (MQ=255)
cGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCa < 7:204678/140‑1 (MQ=255)
cGCCACGAGCCGTGTTTTATTTGATGTGGAAAACACAGGCCCATTGATTTATAAACATACGTAATAACAGCCCGCCCGGATTGAGGATAAAACCGGCATGGCCGGTCAAATGCATGTTTTTTAACCCACCAACTTGTTCa > 4:453662/1‑140 (MQ=255)
gCCACGAGCCGTGTTTTGTTTGATGTGGTAAACACTGGGCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTGCAAATTCTGGGTTGTGAGCGCACCACCTTGTTCAt > 4:811982/1‑140 (MQ=255)
aCGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGa < 7:378101/140‑1 (MQ=255)
gAGCCGTGGTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACt < 7:71417/140‑1 (MQ=255)
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CGTATTCTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTA > NZ_CP022686/2394148‑2394423
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
