Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F36 I0 R1
|
107 |
8366.7 |
6299831 |
98.3% |
6192733 |
135.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,394,287 |
T→G |
18.8% |
N115T (AAC→ACC) |
chuS ← |
hematinate‑forming heme oxygenase ChuS |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,394,287 | 0 | T | G | 18.8%
| 230.3
/ 18.7
| 166 | N115T (AAC→ACC) | chuS | hematinate‑forming heme oxygenase ChuS |
| Reads supporting (aligned to +/- strand): ref base T (67/64); new base G (32/3); total (99/67) |
| Fisher's exact test for biased strand distribution p-value = 5.76e-06 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 171 total aligned reads displayed.
CGTATTCTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTA > NZ_CP022686/2394148‑2394423
|
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTg < 4:632275/138‑1 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGAt < 7:167978/140‑1 (MQ=255)
tCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGAt > 8:579532/1‑140 (MQ=255)
cGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGTTTTCTATgt > 4:504736/1‑137 (MQ=255)
cGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGa > 4:474481/1‑138 (MQ=255)
cGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGa > 2:62493/1‑138 (MQ=255)
cGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTgt > 4:299122/1‑137 (MQ=255)
cGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTgt > 1:803652/1‑137 (MQ=255)
ggTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGAt > 1:278129/1‑138 (MQ=255)
gATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGAtgtg < 2:466620/138‑1 (MQ=255)
aTAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTGTTGTTTGATGTgg > 1:151520/1‑138 (MQ=255)
aTAAACCGTGCCAGAAGCTCACTACATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGaa < 7:676727/140‑1 (MQ=255)
aCCGTGCCAGAAGCTCACTCCATGCCGCCATAGCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAaca < 5:708235/140‑1 (MQ=255)
ccGTGCGAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGaaaaa > 3:350878/1‑137 (MQ=255)
ccGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGaaaaa > 1:595702/1‑137 (MQ=255)
ccGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGaaaa > 2:350913/1‑137 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGAATTGGAAAACACAgg > 7:514883/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTTGAAAACACTgg > 7:599678/1‑140 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAaccatgg > 7:325718/1‑135 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAaca > 8:172654/1‑136 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGATGTGGgaacacaacg > 7:567291/1‑133 (MQ=255)
tGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGATGTGGAAAACACAgg > 6:288564/1‑140 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGTTTTATTTGATGTGGCAAACACTgg > 4:748569/1‑138 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTTATGTGGGAAACACTgg > 1:231454/1‑138 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGTTGTGGAAAACACTgg > 1:726640/1‑138 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAaca < 4:61777/134‑1 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGATGTGGAAAACACTgg > 4:204001/1‑138 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGAGTTTTATGTGATTTGGGAAacagagg > 1:490700/1‑134 (MQ=255)
ccAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAAATTTTAGTAATGCATCGCACTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTGTAGTTGAAAACACtag > 1:675569/1‑136 (MQ=255)
aGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGcc < 3:407661/138‑1 (MQ=255)
aaGCTCACTCCTTGCCGCCTTATCGGTATTGTCGTTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACAGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCatt < 7:94340/140‑1 (MQ=255)
tGCCGCCATATCGGTGTTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACa < 5:276766/140‑1 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCCTTGATTGTGAAACa > 5:668178/1‑140 (MQ=255)
tGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACa < 6:401658/140‑1 (MQ=255)
ccgccATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTTTTGTGGTAAAAACAGGCCCATTGAATTGGAAACa > 1:281213/1‑138 (MQ=255)
ccgccATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATTTGGAAAACACTTGGCAATTGAATGATAAACa > 3:700284/1‑138 (MQ=255)
cgccATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTGATGTGGAAAACCCTGGCCCATTGTTTGAGAAACac > 4:291093/1‑137 (MQ=255)
gccATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGCTGTGGTATACACTGGGCCCTTGGTGGAGAACAAGACg > 6:602240/1‑140 (MQ=255)
cATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGTTTTATTTGATGTTGAAAACACTGGGCCAGTGATTTAGAAACAGACGTa > 6:193527/1‑140 (MQ=255)
cATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTTGCCCCTTGATTGAGGAACAGACgga > 7:437776/1‑138 (MQ=255)
tatCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGGTTTCTTTTATGTGGAAAACACTGGCCCCATGATTGAGCAGCAGACCTa > 2:751489/1‑138 (MQ=255)
tatCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGTGGAAAACACTGGCCCCTTGATTGTGAAACAGACGTa > 4:670550/1‑138 (MQ=255)
tatCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCAACGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGTTGTGGAAAACACGGGGCCAATGATTGAGTAAAAGACGtt > 1:587125/1‑137 (MQ=255)
cGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTATTTTATGTGGAAAACACAGGCCCCGTGATTTAGAAACAGACGTaaaa > 1:3665/1‑137 (MQ=255)
tCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATTTGGAAAACACTTGCCCAGTGGTTGAGAAAAAGCAGGAAATCCAgcccgcg > 8:704391/1‑140 (MQ=255)
tCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAgcgcgcg < 5:193527/140‑1 (MQ=255)
ggTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGCGCCGTGTTGTTTTTGATGTGGCAAACACTCGCCCATTTTTTGTGAACACGGCGGAAATCCAGcgcccgcg > 7:472960/1‑140 (MQ=255)
ggCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCAGTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGAt > 8:284705/1‑140 (MQ=255)
ggCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTGTTGTTGGAAACACTGGCCCCTTGAATGAGAAACAGACGTAAATCCAGCGCGCCCgggt > 6:56034/1‑138 (MQ=255)
cATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGAt > 3:559872/1‑138 (MQ=255)
aaCTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAg < 2:726640/138‑1 (MQ=255)
aCTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAgg < 2:693078/138‑1 (MQ=255)
aCTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAgg < 4:661943/138‑1 (MQ=255)
aCTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGAt < 7:413272/140‑1 (MQ=255)
ttttAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGTCGTTCGCCACTAGCCCTGTTTTATTTGTTTTGGTAAAGACTCTCCCATTGTTTTAGAAAAAGACGTAAATCAAAAGAGCTCGGATTTAgggtaa > 8:524431/1‑136 (MQ=255)
tttAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACGCTGGCGTGCGCCACGAGCCGTGTTTGCTTTGATGTGGAAAACACTGGCCCATTGATTGAGACACAGACGTAAATCCAGCGCGCGCGGATTGAGGATc < 1:20047/138‑1 (MQ=255)
ttAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCa < 4:559871/138‑1 (MQ=255)
ttAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAAAAGACGTAAATCCACCGCGCGCGGATTGAGGATCaaa > 6:83444/1‑139 (MQ=255)
tAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATcc < 3:143531/138‑1 (MQ=255)
tGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTATTTGATGTGGAAAACACTGGCCCAATGATTTTGAAACATACCTAAATCCAGCGCGCGCGGGATGAGGATCAATACGGCAt > 5:372775/1‑140 (MQ=255)
gCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGGTTCTTTTATGTGGTAAACACAGGCCCATTGATTTATAAACAAAACTTAATACACCGCGCGCGGAATGAGGATCAATACGGCaag > 5:368396/1‑138 (MQ=255)
cATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTGGTTGATTTGGAAAAACCAGGCCCAATTATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGCTCAAACCGCCAt > 3:785823/1‑138 (MQ=255)
aTCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATg < 3:368071/138‑1 (MQ=255)
aTCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTc < 8:393865/140‑1 (MQ=255)
aTCGCACTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTc < 5:739547/140‑1 (MQ=255)
cccTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGtt < 7:646370/140‑1 (MQ=255)
ccTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGt < 3:13199/138‑1 (MQ=255)
ccTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTc < 6:252201/140‑1 (MQ=255)
tgatgaTCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTc < 3:620283/138‑1 (MQ=255)
atgatCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTTATGTGGAAAACACTGGCCCATTGATTTAAAAAAAGACCTAAAAACAGCACCCGCCGATTGAGGATAAATCCGGCCAGTCCGGTCaaaa > 8:605382/1‑139 (MQ=255)
tgatCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGGTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCaaa < 1:818127/138‑1 (MQ=255)
cAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTTATGTTGAAAACACTGGCCCATTGATTGATAAACAGACGTAAATACCGCGCGCGCCGATTGAGGATCAAACCGGCTAGTCCCTTCAAAAGCTgg > 8:44725/1‑140 (MQ=255)
aaGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGTGGAAAACACATGCCCCTTGAATGGCATACAGACGTTGATACATCCCCCGCGGAATGAGGGAAAAACCGGCATGGACGGTGAAATgaggg > 4:99804/1‑134 (MQ=255)
aaGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTTATTTAGAAACACACGTAAATACAGCGCGCCCGGAATGAGGATCAATACGGCCTGTCCGTTCAAATTCTgg > 3:503820/1‑138 (MQ=255)
aaGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTATTTGATGTGGAAAAAACAGGCCCATTGATTGAGAAAAAGACGTAAATACAGCGCCCGCGGATTGAGGATCAATCCGGCATGTCCGGTCAAATTCTgg > 4:13199/1‑138 (MQ=255)
aCTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTtg < 3:474482/138‑1 (MQ=255)
tGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTGTTTGATGTGGGAAACACTGGGCCAATGATTTAGAAAAATTACTAAATACAACGCGCGCGGATTTAGGCTCAATACGGCATGTCCGGTGAAATTCTGGTGTGTGaa > 6:335858/1‑140 (MQ=255)
tGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTtgtg < 4:120306/138‑1 (MQ=255)
aaTACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGATGTGGGAAACACTGGGCCATTGCTTGAGAAACAGCCGTAAATCCAGCGCGCGCGGCGTGGTGCTCAAACCGGCATGTACGTTCATATGCTGGTTTGTGGAcc > 6:234646/1‑139 (MQ=255)
aaTACTCTGGCGTTCGCCACGAGCCGTGGTTTCTGTGTTGGGGGAAACACTGGGCCATTGGTTGAGGAACAGACGTTAATCCAGCGCGCGCGGATTGAGGATGCATCCGGCATGTGCCGTCAAATGCTGGTTTGTGAACg > 6:692777/1‑140 (MQ=255)
tACTCTGGCGTTCGCCACGAGCCGTGGTTTGTTTGATGTGGGAAACACTGGCCCATTGATTGTGAAACATAAGTAAATACAGCGCGCCCCGATTGAGGTTCAATACCGCATGTCCGTTCAAATGCTGGTTTTTGTACg > 2:270782/1‑138 (MQ=255)
ctGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCAcc < 1:627535/138‑1 (MQ=255)
tGGCGTTCGCCACGAGCCGTGGTTTATTTGATGTGGTAAACACTCGCCCAATGCTTGATAAACACACGTAAATCCCGCGCGCGCGGAGTTAGGATCAAACCCGCAAGTCCCGTCAAATGCTGGTTTGGTTTCGCACCaaa > 8:663407/1‑139 (MQ=255)
ggCGTTCTCCTCTAGCCGTTTTTTCTTTGATGTGGAAATCACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCTCGCGCGGATTGAGGATGAATGCGGCATGTCGGTTCAAATGCTGGTTTGTGAACGCACCaa < 2:802953/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATTTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 4:199925/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 2:560497/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 3:264760/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 1:664665/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 3:628277/138‑1 (MQ=255)
ggCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCaa < 4:343950/138‑1 (MQ=255)
gCGTTCGCCACGAGCCGTGGTTTCTTTGATGTGGAAAACACTGGGCCATTGATTTAGAAACAGACGTAAATCCAGCGCCCGCGGATTGAGGATCAATCCGGCAAGTCCGTTCAAATTCTGGGTTGTGAACGCACCAAc > 4:353739/1‑138 (MQ=255)
cGCCACGAGCCGTGTTTTGTTTGATGTGGAAAACACAGGCCCATTGATTGAGAAACAGACCTAAATACAGCGCCCGCGGATTGAGTATCAATCCGGCAAGTCCGGTCAAATGCTGGTTTTTGAACGCACCAACTTGtt > 2:358128/1‑138 (MQ=255)
cGCCACGAGCCGTGTTTTCTTTTATGTGGAAAACACAGGCCCATTGATTGAGAAAAAGCCGATAATACAACGCCCGCCGATTGAGGATCAATCCGGCATGTCCCTTAAAATGCTGGTTTGTGAACGCACCACCTTggt > 2:358132/1‑136 (MQ=255)
cACGAGCCTTGTGTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGTAACAGACGTATCTCCAGCGCGCGCGGATTGAGGATAAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACAAACTTGTTCATgg < 6:534621/140‑1 (MQ=255)
actaGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGGCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGa < 5:474714/137‑1 (MQ=255)
aCGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATg < 2:595702/138‑1 (MQ=255)
aCGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATg < 4:801138/138‑1 (MQ=255)
cGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATgg < 2:703848/138‑1 (MQ=255)
gtgtTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAACTCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCg < 4:17412/138‑1 (MQ=255)
gtggTTTCTGTGAAGTGGAAAACACTGGCCCAGTGCTTGCGACACCCCCGTAACTCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTGTGTGAACGCACCAACTTGTTCATGGACTGCGTa < 6:295055/140‑1 (MQ=255)
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CGTATTCTCATCGGTGATAAACCGTGCCAGAAGCTCACTCCATGCCGCCATATCGGTATTGTCGGTGGCATAAACTTTTAGTAATGCATCGCCCTGATGATCAAAGAACTGAATACTCTGGCGTTCGCCACGAGCCGTGTTTTCTTTGATGTGGAAAACACTGGCCCATTGATTGAGAAACAGACGTAAATCCAGCGCGCGCGGATTGAGGATCAATCCGGCATGTCCGTTCAAATGCTGGTTTGTGAACGCACCAACTTGTTCATGGACTGCGTA > NZ_CP022686/2394148‑2394423
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
