Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F35 I0 R1
|
304 |
9232.4 |
10623078 |
98.3% |
10442485 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
3,797,481 |
T→G |
19.7% |
L130V (TTA→GTA) ‡ |
CIW80_RS19065 → |
LacI family DNA‑binding transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 3,797,481 | 0 | T | G | 19.7%
| 248.4
/ 21.4
| 172 | L130V (TTA→GTA) ‡ | CIW80_RS19065 | LacI family DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (41/93); new base G (30/8); total (71/101) |
| Fisher's exact test for biased strand distribution p-value = 1.45e-07 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 184 total aligned reads displayed.
CAGCTCCCGCTTTATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCATCACA > NZ_CP022686/3797345‑3797620
|
cAGCTCCCGCTTTATGCAGTCGTTTCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAATGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCgttag < 7:841982/140‑1 (MQ=255)
gCTCCCGCTTTATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCgttagtt < 1:467898/140‑1 (MQ=255)
cTCCCGCTTTATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCgttagttt > 6:1085918/1‑139 (MQ=255)
cTCCCGCTTTATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCggtagttt > 1:798461/1‑139 (MQ=255)
cccGCTTTATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGCCGCTTCTTCAAGGCAACCCGGCGGCgttagtta > 4:344465/1‑138 (MQ=255)
cccGCTTTATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCgtttgttt > 4:1063511/1‑137 (MQ=255)
cGCTTTATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTAtttt < 1:309303/140‑1 (MQ=255)
cGCTTTATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTAtttt < 6:805289/140‑1 (MQ=255)
gtttATGCAGTCGTTGCAGCAGGTGCTTAATATAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTg < 5:348448/139‑1 (MQ=255)
tttATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTGTGTTAttttt > 4:1129011/1‑138 (MQ=255)
ttATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTTGTTAtttttt > 3:329523/1‑137 (MQ=255)
aaTGCAGTCGTTGAAGCAGTTGATTAATAAAAATGACTTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTgg < 4:713547/137‑1 (MQ=255)
cAGTCGTTTCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGGAGTTAATTTTTGTtct > 3:646278/1‑138 (MQ=255)
tCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCACtt > 2:15569/1‑140 (MQ=255)
tCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGGTCTCCGtt > 6:1004645/1‑140 (MQ=255)
cagcagGTGCTTAATAAAATTGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCt < 4:610503/138‑1 (MQ=255)
cagcagGGGCTTAATAAAAATGAATGCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCt < 4:983178/138‑1 (MQ=255)
agGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATaaa > 6:467469/1‑140 (MQ=255)
agGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTATTTATTTTTGGTTCTCAGTTGGCGGATaaa > 7:1256597/1‑140 (MQ=255)
agGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATAAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTTTTTCTAATGTGGCGGATaaa > 5:909726/1‑140 (MQ=255)
ggTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATaa < 3:818431/138‑1 (MQ=255)
tGCTTAATAAAACTGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGATCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATaaaa < 3:892699/138‑1 (MQ=255)
tGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATaaaa < 3:351097/138‑1 (MQ=255)
tGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACt < 7:255887/140‑1 (MQ=255)
gCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCACCCCGGCGGCGGTTGTTTTTTTTGGTTATCAGTTGGCGGATaataaac > 5:206785/1‑135 (MQ=255)
cTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCa < 6:956697/140‑1 (MQ=255)
ttAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGCCGCTTCTTCAAGGCACCCCGGCGGCGTTAGTTATTTTTTGTTCTCAGTTTGGGTATAAAACTc > 3:959668/1‑138 (MQ=255)
ttAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTATTTTTTTTTGGGTCTAAGTTGGCTGATTAAACta > 3:790928/1‑137 (MQ=255)
ttAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTATTTATTTTTTGTTGTGACTTGGCGGTTAAAAcac > 3:344779/1‑136 (MQ=255)
taataaAAATTAATTCAAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCAcc < 2:1076397/140‑1 (MQ=255)
taaAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGa < 7:1218966/140‑1 (MQ=255)
ttCCAGCTACTTCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCAGCAGATACTCGAGaa < 1:122802/140‑1 (MQ=255)
ttCCAGCTACTGGTGGGGTGGCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAAGCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCgag < 4:71963/138‑1 (MQ=255)
ttCCAGCTACTGCTTGGTTGTCATGAGTATCATCAGCTCAAAGTAGCTGAAATTCTGATGAAGCTTCTTAAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTGCTCAGTTGGCTGTTTAAAGTCACCAGATACTCGAGaa < 8:322344/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCgag < 4:788978/138‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 7:675538/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 8:949416/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 6:704401/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 8:490233/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTAGCTGATAAAACTCACCAGATACTCgag < 4:185798/138‑1 (MQ=255)
ttCCAGCAACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 1:1134635/140‑1 (MQ=255)
ttCCAGCAACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTATGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTGTTATTTTTGGTTCTCAGTTGGCTTATAAAACTCACCAGATACTCGAGaa < 1:849705/140‑1 (MQ=255)
atCCAGCTTCTGCTTGGGTGTCATGAGTATAATCAGCTCAATGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTGTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 2:1176282/139‑1 (MQ=255)
cTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACa < 3:1199381/138‑1 (MQ=255)
aCTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTTTTTATTTTTGGTTATCAATTTGCGGAAAAAACACACCAAATAAACGAGAAAAAAAata > 6:332847/1‑140 (MQ=255)
gttGGGTGTGATGAGTATAATCAGCTCACAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAAtata < 4:535899/137‑1 (MQ=255)
gttGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATAtacc < 2:916083/139‑1 (MQ=255)
cTTGGGTGTCATGAGTATAATCATCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAAtata < 3:855469/138‑1 (MQ=255)
tataATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTATGTATTTTTGGTTCTAAGTTGGCGTTTAAAAAACACCAGATACTACATAAAACAAATATACCTACCCTTTAAGTTGt > 7:621992/1‑140 (MQ=255)
tataATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGt < 7:819759/140‑1 (MQ=255)
tataATCAGCTCAAAGAAACTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGt < 1:772739/140‑1 (MQ=255)
taATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAATTATACCTACCGTTAACGTTGt < 3:570640/138‑1 (MQ=255)
aaTCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTTTTTTTGGGTATCAGTTGGCGGATAAAACTCACCAGGTACTCGGGAAAACAAATATACCTACCGTTAACGGTGTCgg > 8:636380/1‑140 (MQ=255)
tCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTTGTTTTTTTTTGGTAGTAGTTGGCGGGTTAAACTCAACAGATAATCCAGCAAAAAAATATAACTACCGTTAACGTTGTAGGtt > 7:1068381/1‑140 (MQ=255)
tCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTTGTTAGGATTTGGCTGATAAAACTCACCAGATAATCGAGAAAACAAATATACCAACCGTTAACGTTGTAgg > 4:29271/1‑138 (MQ=255)
cAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTc < 5:1066686/140‑1 (MQ=255)
gCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGTGTGTGAGTTGGCTGTTAAAAATCACAAGAAACTCGAGAAAAAAAAATTAACTACCCGTTACGTTGTGGGTTgcc > 8:1225179/1‑140 (MQ=255)
gCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTGTGTTTATTTTTGTTCTGAAGTGGGGGCGAAAAAACACCAGATAAACGAGAAAACAAAAAAACCTAACGGTAACGTTTTAGGTTgcc > 6:154764/1‑140 (MQ=255)
gCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTTTTTTTTTTGGGTGTCAGTTGGCTGCTAAAACAACCCCGATACACGAGAAAACAAAAAAAAAAACCCATAACGTTTTAGGTTccc > 7:548885/1‑140 (MQ=255)
gCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTGGTTTTTTTTGTTCTCACTGGGCGGGTTTAACGGACCACATACTCGAGAAAACAAATAAAACAAACCTTAACGTTGTAGGTTacc > 6:547707/1‑140 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCACCCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTcccc > 2:596980/1‑140 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTTGTTATTTTTGGTTATAAAGTGGCTGATAAAAATAACCAGATAAACGAGCAAACAAATATACCTCACCTTAACGGTGTAGGTTgccc > 8:778833/1‑140 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTATTTTTGGTTCTACGTTGGCGGCTAAAAATCACCAGCTACTCCGGAAAACAAATATACCAACCGGTTACGTTGTGGGTTcccc > 8:486884/1‑140 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGGTATTTTTGGTTCTGACATGGCGGATTAAAAAAAACAGATACTCCTAAAAACAAAAAATCCTACCGGAAACGTTGTAGGTTcccc > 6:1288448/1‑140 (MQ=255)
tCAAAGAAGCTGAAATTCTGCTGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTATTTTTGGTTCTAAGGTGGCGGAGAATACTCCCCAGATAAGACAGAAAAAAAATATAAATAGCGGTAACGTTTTAGGGTccc > 4:532776/1‑138 (MQ=255)
tCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTTGTCATTTTTTGTTGTCAGTTGGCAGATAAAACTCACCAGATACTCGAGAAAAAAAATATAACTACCCTTAACGTTGTCGGTTCCCCt > 7:319299/1‑140 (MQ=255)
tCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGGTTTTTTTTGTTGTCAGTTGGGGGATAAAACACACCAGATACTCGAGAAAACAAATATACCTACAGTTTACGTTGTCGGTTccccg > 6:75012/1‑139 (MQ=255)
cAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTTTTTATTTTTTGTTATCCGTTTGGTGTTAAAAATGCCCCGATACTCGTGAAAACAAATATAACTACCGTTAAAGGTGTGGGGTgccc > 3:843047/1‑138 (MQ=255)
aagCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTGTTTTTTTTGGTTATAAGTTTGGGGGTAAAAATAACCACATAAGAGGGAAAACAAAAATAACTACCGGTAACGGTGTCGGTTGCCCattga > 3:711955/1‑136 (MQ=255)
cTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTTGTTCTCAGTTTGCTTATAAAACACACCAGCAACAACAGAAAACAAATATACCAACCGTGAACGTTTGAGGTTAACCATTCAGTccc > 8:1080398/1‑139 (MQ=255)
cTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTTTTTTTTTTTGTTATGAGTTGGCGGATAAAACTAACCAGATACTCGAGAAAACAAATATACCTAACGGTAAAGTTGTCGGTTCCCCTTTAAGTCCg > 1:1010221/1‑140 (MQ=255)
tGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTTTTTTTTGTTGTGAGTTGGGGGTTAAAAAACGCCAGCTAAAAGTGAAAACAAAAATAGATACCAGTAAAATTGTCGGTTTCCCAGTCAGTcccg > 2:4118/1‑138 (MQ=255)
gAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTTGTTATCAGTTTGGAGATTAAACACACCACATACAAGAGAAAACAAATATAACAAACGTTTACCGTGGCGGTTGCCCGTTAAGTCCg > 4:1231788/1‑138 (MQ=255)
aaaTTCTGTTGTCGCTTCTTGATGGCATTCCGGCTGGGTTTGTTTTTTTTGGTTCTCAGTTGGCTGATAATACTCATGTGATTCTCGAGAAATCAAATATACGTAGCGTTTATGATGTGGGTTCCACTTTGAGTCCGGCt < 1:199295/140‑1 (MQ=255)
aaaTTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCt < 1:752971/140‑1 (MQ=255)
aaaTTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCt < 7:509118/140‑1 (MQ=255)
gCTTCTTCAAGGCAACCCGGCGGCGTTTTTTATTTTTTGTTATCAGTTTGCTGATAAAACAAACCACATACGAGAGAAAAAAAATAAACCAACCCGTAAAGTTGTAGGTTACCCGTTCCGTCCCGCGCAAATTACAAtag > 6:1091988/1‑138 (MQ=255)
cttcAAGGCAACCCGGCGGCGTTAGTTATTTTTTGTTGTCAGTTGGCTGATAAAACTCACCAGCTACTCGAGAAAACAAAAATACCAACCCTTAAAGTTGTCTTTTCCCCTTTTAGTCCGGGTAAAATTAACATCGaaaa > 6:991435/1‑139 (MQ=255)
ttcAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACa < 5:502536/140‑1 (MQ=255)
cAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGc < 8:685479/140‑1 (MQ=255)
cAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAAATCACCAGATACTCGAGAAAACAAATATACCTACCGTTAAAGTTGTCGGTTCCCCTTTCAGTCCGGCTAAAATTACCATAGaaaaa > 4:514309/1‑136 (MQ=255)
aaGGCAACCCGGCGGCGGTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAg < 3:782941/138‑1 (MQ=255)
aCCCGGCGGCGGTAGTTATTTTTGGTTGTCAGTTGGCTGATAAAACTCACCAGATAATCGAGAAAACAAATATACATACCGGTTACGTTGTCGGTTCCCCGTTGAGTACGGCTCAAAATACCATCGAAACCGCAtttttt > 8:1252371/1‑140 (MQ=255)
cccGGCGGCGTTATTTATTTTTGGTTGGCAGTTGGATGATAAAAATCAGCAGCTACTCGCGAAAACAAATATACATAACGGTTACGGTGTCGGGTACCCTTTAAGTCCGGCTCAAATTACCATCCTAACAGCATTTTTTg > 6:518054/1‑140 (MQ=255)
cccGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTg < 2:554736/140‑1 (MQ=255)
cccGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTg < 7:1053755/140‑1 (MQ=255)
ccGGCGGCGTGAGTTATTTTATGTTCTGAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATCTAACTACCGTTAACGTTGTCGGTTCCCCATTCTGTGCGGCTCAAATTACCATCGAAACAGCATTTTTTGa < 1:1100521/140‑1 (MQ=255)
cggcggCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCATTCAGTCCGGCTCAAATTTACATCGAAACAGCAttttttt > 4:971272/1‑137 (MQ=255)
gctgcgGTAGTTATATTTGGTTCTCAGTTGGCTGATAAAACTCAACAGATACTCGAGAAAACAAATATACCTACCTTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 8:256725/137‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCAGCAGATACTCGAGAAAACAAATATACCTACAGTTAACGTTGTCGGTTCGCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 1:283274/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTTCCATCGAAACAGCATTTTTTGaa < 3:971272/138‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGaa < 4:291258/138‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 2:754792/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 5:25681/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 8:885801/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 2:992054/140‑1 (MQ=255)
gcggcgTTAGTTATTTATGGTGCTCAGTTGGCTGATAAAACTCACCAGATACTCTAGAAAACAAATATACCTACCGGTACCGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 8:107218/140‑1 (MQ=255)
cggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCa < 1:15569/140‑1 (MQ=255)
ggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCAt < 1:201177/140‑1 (MQ=255)
ttagttaTTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCATcaca < 1:170195/140‑1 (MQ=255)
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CAGCTCCCGCTTTATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCATCACA > NZ_CP022686/3797345‑3797620
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
