Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F35 I0 R1
|
304 |
9232.4 |
10623078 |
98.3% |
10442485 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,014,291 |
G→T |
19.5% |
intergenic (+137/‑207) |
bolA → / → tig |
transcriptional regulator BolA/trigger factor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,014,291 | 0 | G | T | 19.5%
| 195.7
/ 4.8
| 156 | intergenic (+137/‑207) | bolA/tig | transcriptional regulator BolA/trigger factor |
| Reads supporting (aligned to +/- strand): ref base G (41/66); new base T (3/35); total (44/112) |
| Fisher's exact test for biased strand distribution p-value = 3.63e-04 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 159 total aligned reads displayed.
AAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACAGGGAATGTGATTGATTATAAGAACATCCCGGTTCC > NZ_CP022686/4014153‑4014429
|
aaaaaCGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGTTTTTGGGCGTTTTTGCCAGCATTCAGACGAAAATCGCGCGGGGATTGTGa > 7:1068856/1‑140 (MQ=255)
aaaCGCATTTGCAACTGTCGGCGCTTTACCAGTTTGTTGATAAAGATTTTATGAAAAACGGCCGGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATGCAGACGAAAATCGCCCGGGAATTGTGaaa < 2:798321/140‑1 (MQ=255)
cATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGGGTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATa > 8:1181924/1‑140 (MQ=255)
aTTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGCCGAAAATCGCCCGGGAATTGTGAAAAAATAc > 8:162968/1‑140 (MQ=255)
aCTGGCGGCGATTTTCCATTATTTTGATAAAGATTTTATCAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCACACTAAAATCGCCCGGGAATTGTTAAAAAATACGCGACAg < 6:732287/140‑1 (MQ=255)
tggcGGCGCTTTTCCAGTATTTTGCTAAAGATTTTATCAAAAACGGCCGGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTCCCCAGCATTCAGACTAAAATCGCCCGGGAATTGTTAAAAAATACGCGACAgcg < 1:1239726/137‑1 (MQ=255)
tggcGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAACCGGCCGGCGGGCCGTTTTGTTTTGTCTGGATTTGGCGCTTTTTGCCCAGCATTCAGACCAAAATCCCCCGGGAATTGGGAAAAAATACGCGACAgcg < 7:347695/137‑1 (MQ=255)
ggTCGGCGCTTTTCCAGTAGGGTGCTAAAGATTTTATAAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCATACGAAAATCGCCCGGGAATTGGGAAAAAAAACGCGACAgcg < 6:1203118/139‑1 (MQ=255)
tttttCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGGGGGCGGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAAt < 4:278850/137‑1 (MQ=255)
gttttCCATTATGTTGCTAAAGATTTTATGAAAACCGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACTAAAATCGCCCGGGAATTGTCAAAAAATACGCGACAGCGCGCAATaa < 8:47278/139‑1 (MQ=255)
tttaCCAGTATGTTGATAAATATTTAATCAAAACCGGCCGGGGGGCGGTTTTTTTTTGTGTGTATTTTGCGCTTTTTGCCCCTCATTCAGACTAAAATCGCCGGGCAATTGTGAAAAAATACGCGACAGCGCGCAATAAc < 6:9062/140‑1 (MQ=255)
tATGTTGCTAAAGATTTTATGAAAACCGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTtct < 4:739958/138‑1 (MQ=255)
tttttGATAAATATTTTTTTAAAAACGGCCGGCGGGCGGTTTTTTTTTGTCTGTATTTTGCGCTTTTTGCCCAGAATTCAGACGAAAATCGCCCGGTAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGa < 5:111224/137‑1 (MQ=255)
aTGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTTCCCAGCATTAAGACGAAAATCGCCCGGGAATTGTTAAAAAATACGCGACAGCGCGCAATAACCGTtctg > 3:980729/1‑137 (MQ=255)
gTTGCTAAAGAATTTAAGAAAAACGGCCCGCGGGCCTTTTTGTTTTGTCGGGATTTTGAGATTTTAGCACAGCATTCAGCCGAAAATCGCCCGGGAATTGTCAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACt < 2:916232/140‑1 (MQ=255)
ttGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTTTTTTGTGTGGATTTTGCGCTTTTTGCCAAGCATTCAGACGAAAATCGCCCGGGAATTTTGAAAAAATACGCGACAACGCGCAATAACCGTTCTCGACTc > 1:961869/1‑140 (MQ=255)
gCTAAATATTTTATGAAAAACGGAGGGCGGGCCGTTTTGTTTTGTCGGGATTTTGCGCTTTTTGCCCTGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCAt < 2:321432/140‑1 (MQ=255)
gATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATCCAGACGAAAATCGCCCGGGAATTGTGAAAAAATTCGCGACAGCGCGCAATAACCGGTCTCGACTCAGaaaa > 3:752364/1‑138 (MQ=255)
gATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTATGCGCTTTTTGCCCAGAATTAAGACGAAAATAGCCCGGGAATAGTGAAAAAAAACACCACAGCGCGCAATAACCGTTCTCGACTCATaaaa > 4:66275/1‑138 (MQ=255)
ttttaaaaaCGGCCTGCGGGCCGTTTTTTTTTGTCTGTATTTGGGGCTTTTTCCCCCGCAATCCGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 6:895100/136‑1 (MQ=255)
ttttaaaaaCGGCCTGCGGGACGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGAt < 4:56400/134‑1 (MQ=255)
tagtaaaaaGGGCGTCCGGGTCTTTTTGTTTTTTATGGATTTTGCGCTTTTTCCCCCTCCTTCAGACGAAATTCCCCCGGTAATTGGTAAAAAATCCGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 6:1119357/136‑1 (MQ=255)
tATTAAAACAGGCCTGCGGGCCGTTTTTTTTTGTAGGTATTTTGCTCTTTTTGACCAGCATTCATACGAAAATCGCCGGGGATTTTTGAAAAAATAAGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 7:436831/140‑1 (MQ=255)
tATTAAAAACGGCCTGCGGGGCGTTTTTTTTTGGCGGTATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGTAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 8:341410/140‑1 (MQ=255)
tATGAGAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc > 7:399625/1‑140 (MQ=255)
tATGAAACACGGCCTGCGGGCGTTTTTTTTTTGTCTGCATTTTGCGCTTATGCCCCAGCATTCTGACGAAATTGGCCCTTTTTTTGTCAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 7:1046110/140‑1 (MQ=255)
tATGAAAACCGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCCGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 8:972773/140‑1 (MQ=255)
tATGAAAAACGTCAGGCGGGCCGTTTTGTTTTGTCTGGATTTGGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 7:540380/140‑1 (MQ=255)
tATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGGTTTTTGCCCAGCATTGAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACCGCGCGCAATAACCGTTCTCGACTCAGAAAAGGGCTGc > 6:554679/1‑140 (MQ=255)
tATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCATACGAAAATCGCCCGGGAATTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 6:720937/140‑1 (MQ=255)
tATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc > 6:409068/1‑140 (MQ=255)
tATGAAAAACGGCCTGCGGGCCGTGTTGTTTTGTCTGGATTTTGCGCGTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGCCAGCGCGCAATAACCGGTATCGCCTCATAAAAGTGATGc > 7:838380/1‑140 (MQ=255)
tATGAAAAACGCCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTCCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 8:720370/140‑1 (MQ=255)
tATCAAAACGGGCGTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCTGCTTTCAGACGAAACGCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 8:540799/140‑1 (MQ=255)
aattaaaacCGGCCGGCGGGCGGTTTTGTTTTGTCTGGTTTTTTCGAGTTTGGCCCAGCATTCAGACGAAAATCGCCCGGTAATTGTCAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 7:723663/136‑1 (MQ=255)
aattaaaaaGGGCCTGCGGGCCGTTTTTTTTTGTCTTGATTTTGCGATTTTTGCCCTGCATTCCGACGAAAATCGCCCGGGAATTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 5:1031948/136‑1 (MQ=255)
aatcaaaaaCGGCCTGCGGCCGGTTTTGTTTTGTCTGGTTTTTGCGCTTTTTCCCCAGAATTAAGACTAAAATCGCCCGGGAATTGTTAAAAAAAACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 7:906750/136‑1 (MQ=255)
tGAAAACCGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCg < 8:838380/140‑1 (MQ=255)
tGAAAAACGGCCTGCGGGCCTTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGTAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 3:49531/138‑1 (MQ=255)
tGAAAAACGGCAGGAGGGCAGTTTTTTTTTGTCTGGTTTTTGCGCTTTTTGCCAAGCATTCAGACTAAAATCGCCCGGTAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCg < 1:983074/140‑1 (MQ=255)
aaCGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACTAAAATCGCCCGGTAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCta < 3:300312/138‑1 (MQ=255)
aCGGCCTGTGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCCTTCAGTCGAAAATCGCCCGGGAATTGTGAAAAAATACGCGCCAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCtat > 3:1048351/1‑138 (MQ=255)
aCGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTAAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGGTCTAGACTCATAAAAGTGATGGCGCtatta > 5:860550/1‑138 (MQ=255)
gCCTGCGGGCCGTTTTGTTTTGTCTGTATTTTGCGCTTTTTGCCCAGAATTCAGACGAAAATAGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGc < 5:16410/140‑1 (MQ=255)
cTGGGGGCCGTTTTGTTTTGTCGGGATTTTGGGCTTTTTGCCCCGCATTCAGCCGAAAATCGCCGGGGAATTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGc < 3:699353/138‑1 (MQ=255)
gggggCCTTGTTGTTTTGTGTGTATTTTGCGGTTTTTGCGCAGCATTCATACTAAATTGGCCCGGGAATTTTGAAAAAATACGCGACAGCGCGCAATAAGCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCcg < 4:227853/136‑1 (MQ=255)
gCGGGCCTTTTTGTTTTTGTTGTATTTTGCGCTTTTTGCCCAGCATTCCGACGAAAATCGCCGGGGAATTGTCAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCcgcg < 5:1024653/140‑1 (MQ=255)
cGGGCCGTTTTGTTTTTTCTGGATTTTGCGCGTTTTGCCCAGCAGTCAGCCGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTGGACGCATAAAAGTGTTGCCGGTATAATGCcgcgg > 8:142286/1‑139 (MQ=255)
cGGGCCGTTTTGTTTTGTCTGGTTTTTGCGCTTTTTGCCCCGCATTCAGACGAAAATCGCCCGGGATTTGTGAAAAAATACGCGACAGCGCGGCATAACCGTTGTCGACTCTAAAAAGTGATGCCGCGATAATgcggcgg > 2:962206/1‑139 (MQ=255)
gggCGGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATACACCCGAAAATCGCCCGGTAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTc < 1:245011/140‑1 (MQ=255)
ggCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCCGCATTCAGACTAAAATCGCCCGGGAATTGTGAAAAAATCCGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTcc < 1:590903/140‑1 (MQ=255)
tgttttgtCTGTATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGaa < 2:58563/140‑1 (MQ=255)
tgttttgtCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGaa < 2:1312878/140‑1 (MQ=255)
tgttttgtCTGGAGTTTGCTCTTTTTGCCCAGCATTCACACGAAAATCGCCCTGTAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGaa < 2:168810/140‑1 (MQ=255)
tgttttggCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTg < 4:97802/138‑1 (MQ=255)
ttttgtCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAAAACCCTACAGCGCGCAATAAACGTTCTAGACTCATAAAAATGATGCCGCTATAATGCCTCGTCCTATTTGAAtt > 6:132661/1‑139 (MQ=255)
gtCTGTATTTTGCGCTTTTTGCCCAGATTTCACACTAAAATCGCCCGGGTATTGTGAAAAAATCCGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCt < 3:960054/138‑1 (MQ=255)
gtCTGTATTTTGCGCTTTTTCCCCAGCATTAATACTAAAATCCCCCGGTAATTGTCAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCt < 3:155284/138‑1 (MQ=255)
tGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTc > 4:1167341/1‑138 (MQ=255)
ttttttGGGATTTTTGCCAAGTTTGCAGTCTAAATTCGCCCGTCAATTGTAAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTTTAATGCCGCGTCCTATTTGAATTCTTTCGGga < 8:493790/138‑1 (MQ=255)
ttttttGCTGTTTTTCCCCTGAATTCATAATAAAATCGCCCGGGAATTTTTAAAAATTACGCGACAGCGCGCAATAACGGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGga < 7:1162323/138‑1 (MQ=255)
tagtttGCGCTTTTTGCCCAGCATTCACACGAAAATCGCCCGGGAATTGAGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGga < 8:728369/137‑1 (MQ=255)
tttttGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCggg < 4:1288756/137‑1 (MQ=255)
aTTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGgat > 1:493653/1‑140 (MQ=255)
tGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGAtt > 6:351472/1‑140 (MQ=255)
tGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCCTTCTCGACTCATAAAAGTCAAGCCGCTAAAATGCCGCGTCCTATTAGAATCCATTCGGGATGAtt > 5:1130831/1‑140 (MQ=255)
tcacTTTTTCCCCACAATACATATTAAAATCGCCCTTCATTTTTTAAAAAATAAGCTACAGCGCTCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTc < 1:439164/137‑1 (MQ=255)
gcgcTTTTTGCCCCTAATTCACACTAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTc < 7:1181924/140‑1 (MQ=255)
gcgcTTTTTCCCCAGCATTCTGACGAAAATCGCCCGGTAATTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGgatgat < 3:64608/138‑1 (MQ=255)
tttttGCCCAGAATTCAGACTAAAATCGCCCGGGAATTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGt < 8:256542/140‑1 (MQ=255)
tttttGCCAAGAATTCTTATTAAATTGGCCCGGTAATTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGt < 5:663119/140‑1 (MQ=255)
ttGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTa > 4:1063207/1‑138 (MQ=255)
tccccAGCATTCAGACTAAAATCGCCCGGGAATTGTGAAAAAAAACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACa < 7:1028689/138‑1 (MQ=255)
tGCCCAGCATTCAGACTAAAATGGCCCGGTTATTGTTAAAAAATCCGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACa < 5:528213/140‑1 (MQ=255)
tGCCCAGCATTCAGACTAAAATCGCCCGGGAATTGTCAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACa < 8:263342/140‑1 (MQ=255)
cAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATCCGCGACAGCGAGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACAGGGa < 2:605733/140‑1 (MQ=255)
aagaaTTCAGACGAAAATCGCCGGGGAATTGTGAAAAAAACCGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACAGGGa < 1:10079/136‑1 (MQ=255)
tCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACAGGGAATGtga < 1:1099277/140‑1 (MQ=255)
tCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACAGGGAATGtga < 2:118173/140‑1 (MQ=255)
acacactaaaaTCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACAGGGAATGtga < 7:243007/133‑1 (MQ=255)
aaaGACTAAATTCGCCCTGGAATTGTTAAAAAAAACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATTCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACAGGGAATGtga < 5:424832/138‑1 (MQ=255)
cAGACTAAAATCGCCCGGTAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACAGGGAATGtgat < 5:1223836/140‑1 (MQ=255)
cAGACGAATATCGCCCGGTATTTGTTAAAAAATCCGCGACAGCGCGCAATAACCGTTCTCGACTCATATAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACAGGGAATGtgat < 8:1005869/140‑1 (MQ=255)
aCGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATACCCGATCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGGCCGCTTTGAATGCTTTCGGGATGATTCTGGTAACAGGGAATGtgaatga > 2:831623/1‑140 (MQ=255)
aaaaTCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACAGGGAATGTGATTGATta > 1:1158206/1‑140 (MQ=255)
aactCGCCGGTGAATTGTGAAAAAAACCGCGACAGCGCGCTATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACAGGGAATGTGATTGATtat < 1:1005768/137‑1 (MQ=255)
aaacGCCCGGGAATTGTGAAAAAATACCCGCACGCGCGCAATAACCGTTCTCGCCTCATAAAAGGGATGCCGAGAGAATGCCGCGTCCTATTTGAATGCTTACGTGAAGCGTCTGCTCACCGTGCATGtgattgaatt > 4:265677/4‑135 (MQ=255)
aaTCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTc < 2:1171380/87‑1 (MQ=255)
aaTCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTc > 1:1171380/1‑87 (MQ=255)
aaTCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACAGGGAATGTgattgattt > 4:1177447/1‑137 (MQ=255)
aaTCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACAGGGAATGTGATTGATta > 3:276461/1‑138 (MQ=255)
aTCGCCAGGGAATTGTCAAAAAATACGCGACAGCGCGCAATAACCGTTCTAGACTCATAAAAGTGATGCCTCTATAATGCCTCGTCCTATTTGAATGATTTCGGGATGATTCTGGTAACAGGGAATGTGATTGATtat < 3:1114108/138‑1 (MQ=255)
gCCCGGTAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACAGGGAATGTGATTGATTATAAGaa < 5:1299661/140‑1 (MQ=255)
gCCCGGTAATTGTGAAAAAATACGCGACAGCGAGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACAGGGAATGTGATTGATTATAAg < 4:700103/138‑1 (MQ=255)
gCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACAGGGAATGTGATTGATTATAAGaa < 8:843489/140‑1 (MQ=255)
gCCCGGCAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAACAGTGATGCCGCTATAATGCCGCGTCCTATTTGACTGCTTTCGGGATGATTCTGGTAACAGGGAATGTGATTGATTATAAg < 4:787514/138‑1 (MQ=255)
cccGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACAGGGAATGTGATTGATTATAAGAAc > 2:146782/1‑140 (MQ=255)
tgAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACAGGGAATGTGATTGATTATAAGAACATCCCGGTTcc > 1:428514/1‑140 (MQ=255)
tgAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACAGGGAATGTGATTGATTATAAGAACATCCCGGTTcc > 1:674576/1‑140 (MQ=255)
tgAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACAGGGAATGTGATTGATTATAAGAACATCCCGGTTcc > 2:364247/1‑140 (MQ=255)
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AAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGATGATTCTGGTAACAGGGAATGTGATTGATTATAAGAACATCCCGGTTCC > NZ_CP022686/4014153‑4014429
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
