Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A26 F12 I0 R1
|
131 |
9881.0 |
7547414 |
98.3% |
7419107 |
134.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,805,047 |
G→T |
16.1% |
pseudogene (328/934 nt) |
CIW80_RS09020 → |
nucleotidyl transferase AbiEii/AbiGii toxin family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,805,047 | 0 | G | T | 16.1%
| 254.3
/ 3.2
| 159 | pseudogene (328/934 nt) | CIW80_RS09020 | nucleotidyl transferase AbiEii/AbiGii toxin family protein |
| Reads supporting (aligned to +/- strand): ref base G (61/60); new base T (2/33); total (64/95) |
| Fisher's exact test for biased strand distribution p-value = 4.44e-07 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 161 total aligned reads displayed.
ATGTCAGAAGATATTGATATAAAGCTCGTGCCAACAGAGAACTTTATGCAAAATGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCATTTATTAAGCTGGAGTTGATGGAAAGCACTCTGCTGGAA > NZ_CP022686/1804909‑1805184
|
tGTCAGAAGATATTGATATAAAGCTCGTGCCAACAGAGAACTTTATGCAAAATGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTgg > 5:308472/1‑138 (MQ=255)
gtattaagaTATTGATATAAAGCTCTTGCCAAAATAGAATTTTATGCAAAATGGCACAGACACGAGAAGATAAATTCTCAATGTAATCTTG‑CAAATAATCACGGATGTTTTTCATAATTCTGACATTTTCAGCTTGGa < 5:788832/133‑1 (MQ=255)
gTCAGAAGATATTGATATAAAGCTCGTGCCAACAGAGAACTTTATGCAAAATGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGa > 8:817048/1‑138 (MQ=255)
cAGAAGATATTGATATAAAGCTCGTGCCAACAGAGAACTTTATGCAAAATGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTT‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAAt > 3:726546/1‑140 (MQ=255)
gaagaTATTGATATAAAGCTCGTGCCAACAGAGAACTTTATGCAAAATGGCAGAGACATGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAAt > 6:133987/1‑138 (MQ=255)
gaagaTATTGATATAAAGCTCGTGCCAACAGAGAACTTTATGCAAAATGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAAt > 8:182073/1‑138 (MQ=255)
gaagaTATTGATATAAAGCTCGTGCCAACAGAGAACTTTATGCAAAATGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGAGAAt > 6:187675/1‑138 (MQ=255)
aagaTATTTTTATAATGCTCGTGCCAACAGAGAACTTTTTGAAAAAGTGCTGATACAAGAGAAGAAAATTTCGCTTGTAAATCGTG‑AAAATAATCACGGTTGTTTTTCAAATTTCTTACATTTTCAGGTTGGATAATg < 2:961782/138‑1 (MQ=255)
tatatTGATATAAAGCTCGTGCCAACAGATAACTTTATGAAAAATGGAATAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGTATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGaa < 2:77740/137‑1 (MQ=255)
gaTATTGATATAAAGCTCGTGCCAACAGAGAACTTTATGCAAAATGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGaaaa > 3:382015/1‑140 (MQ=255)
ttttatatAAAGCTCTTGCCAACAGAGAACTTTATGAAAAATGGCAGAGACAAGATAAGAAAAATTCGCAAGTAAATCGTG‑AAAATAATCACGGATTTTATTAATAATTCTGATATTTTCAGCTTGGATAATTAAAAc < 1:190248/134‑1 (MQ=255)
ttttataaAAAGCCGGGGCCAACAGATAAATTTATGCAAAATGGCAGAGACAAGAGAATAAAACTTCGCACGGAAATCGTG‑CAAATAATCAGGGATGTTATTAATAATTCTTACATTTTCAGCTTGGATAATGAAAAc < 2:144302/134‑1 (MQ=255)
tttGATATAAAGCTCGTCCCAACAGAGAAATTTATGAAAAATGCCAGATAAAAGAGAAGAAAAATTCGCAAGTAAATCGTG‑AAAATAATCCCGTATGTTATTAATAATTCTGACTTTTTCAGCTTGGATAATGAAAAc < 2:248453/137‑1 (MQ=255)
atTTATATAAAGCTCGTGCCAAAATATAAATTTATGAAAAATGGCAGATAAAAGAGACTAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTAATAATTCTTACTTTTTCAGCTTGTATAATTAAAACGc < 3:178471/140‑1 (MQ=255)
atTGATATAAAGCTCGTGCCAAAAGAGAACTTTATGCAAAATGGAAGAGACAAGAGAAGAAAAATTCGAAAGGAAATCGTG‑CAAAAAATCACGTATTTTATTAATAATTCTGAAATTTTCTGCTTGTATAATTAAAAc < 1:760413/138‑1 (MQ=255)
tttatatAAAGCTCGTGCAAAAATATAACTTTATGAAAAATGGCTGAGACTAGATAATAAAATTCCCAAAGGAAATCGTG‑CAAATAATCACGGATGTTATTAATAATTCTGACATTTTAAGCTTGTATAAGGAACACGcc < 4:929249/137‑1 (MQ=255)
gATATAAAGCTCGTGCCAACAGAGAACTTTATGCAAAATGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGcc > 2:756547/1‑138 (MQ=255)
ataAAGCTCGTGCCAACAGAGAACTTTATGCAAAATGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGtat > 4:776056/1‑140 (MQ=255)
ataAAGCTCGGCCCAACAGAGAACTTTATGCAAAATGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGtat < 4:119914/140‑1 (MQ=255)
gCTCGTGCCAACTGATAACTTTATGAAAAATGGCCTCTACAACAGAAGAAAAATTCGCAAGTAAATCGTG‑AAAATAATCAGGGATGTTATTCATAATTCTGAAATTTTCAGCTTGGATAATTAAAACGCCCGTATAac < 2:882129/138‑1 (MQ=255)
gCTCGTGCCAACAGAGCACTTTATGCAAATTGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTAATAATTCTGACATTTTTAGATTGTATTATGATAACGCCAGTATAac > 6:252667/1‑138 (MQ=255)
cgggCCAACAGATAACTTTATGCAAAATGGCAGAGCCAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAAAAACCCCGTATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACg < 6:335500/135‑1 (MQ=255)
tGCCAACAGAGAACTTTATGCAAAATGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATACCACGtg > 7:279723/1‑138 (MQ=255)
tGCCAACAGAGAACTTTATGCAAAATGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGtg > 5:347932/1‑138 (MQ=255)
tGCCAACAGAGAACTTTATGCAAAATGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACAAGtg > 6:81149/1‑138 (MQ=255)
tGCCAACAGAGAACTTTATGCAAAATGGCAGAGACAAGAGAACAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCAGTAAAACACGtt > 6:852438/1‑137 (MQ=255)
ggCCAACAGAGAACTTTATGCAAAAGGCCAGAGACAAGCGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCAGGGATGTTATTAATAATTCTGACATTTTCAGCTTGCATAAGGAACACGCCCGTATAACACGtgat < 4:132533/139‑1 (MQ=255)
ggCCAACAGAGAACTTTATGAAAAATGCCAGTCACAAGAGAACAAAATTTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGtg < 6:683974/137‑1 (MQ=255)
ggCCAACAGAGAACTTTATCCAAAATGGCAGAGACAAGAGAAGAAAAATTCGCAAGTAAATGGTG‑CAAATAATCCCGGATTTTATTCATAATTCTGACATTTTCAGCTTGTATAATGAAAACGCCCGTATAACACGtgat < 3:761532/139‑1 (MQ=255)
gcccAACAGAGAACTTTATGCAAAATGGCAGATACAAGATAATAAAAATTAGAAAGTAAATCGTG‑CAAATAATCACGTATGTTATTCATAATTCTGAAATTTTCAGCTTTGATAATGAAAACGCCCGTATAACACGtg < 2:611526/136‑1 (MQ=255)
gCCAACAGAGAACTTTATGCAAAATGGCAGCGACAAGAGAAGCAAAATTAGCCATGAAATAGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTACGCTTGGATAATGAAAACCCCCGTATAACACAtgt > 6:643886/1‑137 (MQ=255)
gCCAACAGAGAACTTTATGCAAAATGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGtga > 2:923943/1‑138 (MQ=255)
agagAACTTTATGCAAAATGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTa > 5:575065/1‑138 (MQ=255)
aaCTTTATGCAAAATGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAACCGCCCGTATAACACGTGATGAGTATCGt > 1:870962/1‑138 (MQ=255)
cTTTATGCAAAATGGCAGAGACAAGAGAAGAAAAAATCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTta > 8:436643/1‑138 (MQ=255)
tATGCAAAATGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACg > 4:493424/1‑140 (MQ=255)
gCAAAATGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATACCGa > 1:900504/1‑138 (MQ=255)
gCAAAATGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGa > 1:496252/1‑138 (MQ=255)
aTGGCTGAGACATGAGAAGAAAAATTGGCAAGGAAATTGGG‑CAAATAATCAGGTTTTTTTTTCATATTTGTGACATTTTCAGCTTGGATAATTAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAAtct < 6:421867/138‑1 (MQ=255)
tGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAAtctc > 5:528864/1‑138 (MQ=255)
ggCATAGAAAAGATAATAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGTATGTTATTCATAATTCTGACATTTTCAGCTTGTATAATTAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGt < 3:577515/140‑1 (MQ=255)
ggCACAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATTAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGt < 4:765130/140‑1 (MQ=255)
gagaCAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGAATAACACGTGATGAGTATCGTTATACCGAAATCTCGGtcc > 8:414563/1‑136 (MQ=255)
cagacaagacaACAAAAATTCGCAAGGAACTCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTAc < 8:680677/137‑1 (MQ=255)
agaCAATACAAGAAAAATTCGCATGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATACTGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACg < 8:323495/138‑1 (MQ=255)
agaCAAGAGAAGAAAAATTCTCAAGGAAATCGTC‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTAAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGtt < 4:680890/140‑1 (MQ=255)
acaCAAGACAACAAAAAATCGCAAGCAAATCGAG‑CAAATAATCACGCATGTTAGTCATAATTCTGACATTTTCAGATTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACg < 5:139752/136‑1 (MQ=255)
aaGAGAAGAAAAATTCGCAAGGAATTCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTCCGTTAt > 5:93124/1‑138 (MQ=255)
atattaaaaaTTCGCATTTAAAT‑GTGTCAAATAATAACGGATGTTATTCATATTTGTTACATTTTCAGCTTGGATAATTAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATccc < 6:509191/133‑1 (MQ=255)
agattaaaaaTTCCCTAGTAAATCTTT‑AATATATTAACGGATGTTTTTAATAATTCTTAGATTTTATTGTTTGATATTTAAAACGCCCGTATACCACGTGATGATTATCCTTATAAAGAAATCTCGGTACGTTATccc < 1:409153/133‑1 (MQ=255)
agaagaAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGTTGTTATTCATAATTATGACATTTTCAGCTTGTATAATCAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCa < 3:960982/140‑1 (MQ=255)
gaaAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACa > 3:291596/1‑140 (MQ=255)
aaaaaTTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGTATAATGAACACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGAc < 5:629230/138‑1 (MQ=255)
aaaaTTCGCAAGGAATACGTG‑CAAATAATCACGTATGTTATTCATAATTGTGACATTTTCAGCTTGTATAATGAACACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACa < 8:391180/138‑1 (MQ=255)
aaaTTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAATCGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTCCGTTTTCCCCAGACAt > 6:786638/1‑138 (MQ=255)
ttctctaGGATATCGTG‑CAAATAATCACGTATTTTTTTCATATTTCTGACTTTTTCAGCTTGTATATTTAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTg < 7:372095/132‑1 (MQ=255)
ttCGCAAGTAAATCGTG‑AAAATAATCACGGATTTTATTAATAATTCTGACTTTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTg < 8:259174/138‑1 (MQ=255)
ttCGCAAGGAAATCGTG‑CAAAAAAACACGCATGTTATTCATAATTCTTACATTTTCCGCTTGGATAATCAACCCGCCCGTATAACAAGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCCGACATTTg < 7:206618/138‑1 (MQ=255)
cGCAAGTAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTTCAATTTTCAGCTTGTATAATTAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGca < 5:336365/138‑1 (MQ=255)
gctagtaaaTCTGG‑CAAATATTCACGGATGTAATTCATAATTCTGACATTTTCAGCTTGTATAATCAAAACGCCCGTATAACACGTGATTAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGcac < 2:781742/132‑1 (MQ=255)
taattCGTG‑CAAATAATCAGGGATTTTATTCATAATTCTGACATTTTCAGCTTGTATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTc < 5:439229/134‑1 (MQ=255)
taaaTCGTG‑AAAATAATCACGGATGTTATTAATAATTCTCAAATTTTCAGCGTGTATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTccc < 3:234118/139‑1 (MQ=255)
taaaTCGTC‑CAAATAAGAACGTTTTTTATTCTTAATTGTGACATTTTCTGGTTGGATAATCAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCTGTACGTTATCCCCAGACATTTGCACAAGTc < 1:193263/137‑1 (MQ=255)
taaaTCGGG‑CAAATATTCACGGATGTTATTAATAATTCTGAGATTTTCTTATTGTATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTc < 7:817048/137‑1 (MQ=255)
gAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGAAAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTc < 7:817046/138‑1 (MQ=255)
caaaGCGTG‑AAAATAATCACGTTTGTTATTCATAATTCAGACATTTTCAGCTTTGATAATGAAAACGCCATTATAACACGTGAGGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTc < 5:196733/137‑1 (MQ=255)
tG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTc < 8:284626/138‑1 (MQ=255)
tG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCtt > 3:637998/1‑140 (MQ=255)
cAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCCCAAGTCCCCTGTCtt > 6:373410/1‑138 (MQ=255)
cAAATAATCACGGATGATATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATATCGAATTCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCtt > 8:348504/1‑138 (MQ=255)
ataatCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTcc < 4:291596/140‑1 (MQ=255)
ataatCACGGATGTAATTCAAAATACTGCCCTTTTCAGCTTGGAAAATGAACACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGGCCCCTGTCTTCGTcc < 3:347629/140‑1 (MQ=255)
taatCACGGATGTTATTCATAATTCTCAAATTTTCAGCTTGTATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCa < 3:613550/140‑1 (MQ=255)
cccgcaTGTTATACATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCAtt < 2:355646/133‑1 (MQ=255)
cACGTATGTTATTAATAATTCTGACATTTTCAGCTTGGATAATTAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCAtt < 2:745588/138‑1 (MQ=255)
ccGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATTAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCAttt < 6:452900/137‑1 (MQ=255)
aTGTTATTCATAATTCTGAAATTTTCAGATTGGATAATGAAAACGCCAGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTAAGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCATTTATTAAg < 3:255571/140‑1 (MQ=255)
ttCATAATTCTTACATTTTCAGCTTGTATAATTAACACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCATTTATTAAGCTgg < 7:41175/138‑1 (MQ=255)
cATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCATTTATTAAGCTGGAGtt > 3:441993/1‑140 (MQ=255)
aaTTCTGACATTTTCATCTGTTATAATGAAAAAGACCTTATAACACTTGTTTAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCAAAATTCCACTGTCTTCGTCCATTTATTAAGCTGGAGTTg < 8:691547/138‑1 (MQ=255)
aaTTCTGACATTTTCAGCTTGGATACTTAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCATTTATTAAGCTGGAGTTg < 2:465073/138‑1 (MQ=255)
aaTTCTGAAATTTTCAGCTTGTATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCATTTATTAAGCTGGAGTTg < 5:410998/138‑1 (MQ=255)
aaTTATGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCATTTATTAAGCTGGAGTTg < 8:567169/138‑1 (MQ=255)
ttCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCATTTATTAAGCTGGAGTTGAt > 1:99311/1‑138 (MQ=255)
tatGACTTTTTCAGCTTGGATAATGAAAACGCCATTATAACACGTGATGAGTATCGTTATAACGATATCTCGGTACGTTTTCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCATTTATTAAGCTGGAGTTGATg < 1:593209/136‑1 (MQ=255)
tCTGACTTTTTCTGCTTGTTTATTGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCATTTATTAAGCTGGAGTTGATg < 5:63949/138‑1 (MQ=255)
tCTGACATTTTCAGCTTGGATAATTAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCATTTATTAAGCTGGAGTTGATg < 1:923943/138‑1 (MQ=255)
tgcccttttCAGCTTGGATATTTAAAACGCCCGTATAACACGGGCTGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCCGACATATGCACAAGTCCCCTGTCTGCGTCCATTTATTAAGCTGGAGTTGATGGa < 8:520477/133‑1 (MQ=255)
cATTTTCAGTTTGGATATTGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCATTTATTAAGCTGGAGTTGATGGAAAGCa < 3:785937/140‑1 (MQ=255)
cATTTTCAGCTTTGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCATTTATTAAGCTGGAGTTGATGGAAAg < 1:734513/138‑1 (MQ=255)
cATTTTAAGATTGGATAATGAACACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCACCAGACATTTGCACAAGTCCCCTGTCTTCGTCCATTTATTAAGCTGGAGTTGATGGAAAg < 7:123367/138‑1 (MQ=255)
aatattCCGCTTGTATATTGAACACGCCCGTATAACAAGTGATGAGTATCGTTATAACGAAATCTCGGGACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCATTTATTAAGCTGGAGCTGATGGAAAg < 6:594456/134‑1 (MQ=255)
aaTTTTCAGCTTGTATAATGAAATCGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTGGGTACGTTATCCCCAGACATTTGGACAAGTCGCCTGTCTTCGTACATTTATTAAGCTGGAGTTGATGGAAAg < 5:645558/137‑1 (MQ=255)
aaTTTTCAGCTTGGATAATTAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCATTTATTAAGCTGGAGTTGATGGAAAg < 5:816321/137‑1 (MQ=255)
aTTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCCGTCTTCGTCCATTTATTAAGCTGGAGTTGATGGAAAGc > 1:604002/1‑138 (MQ=255)
ttttCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCATTTATTAAGCTGGAGTTGATGGAAAGCa > 2:917987/1‑138 (MQ=255)
tCAGCTTGTATAATTAACACGCCCGTATAACACGTGTTGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCATTTATTAAGCTGGAGTTGATGGAAAGCActc < 1:358211/138‑1 (MQ=255)
cAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCGTCGTCCATTTATTAAGCTGGAGTTGATGGAAAGCActct > 5:825020/1‑138 (MQ=255)
tGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCATTTATTAAGCTGGAGTTGATGGAAAGCACTCTGCTGGaa > 3:851156/1‑140 (MQ=255)
ggATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCATTTATTAAGCTGGAGTTGATGGAAAGCACTCTGCTGGa < 8:543031/138‑1 (MQ=255)
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ATGTCAGAAGATATTGATATAAAGCTCGTGCCAACAGAGAACTTTATGCAAAATGGCAGAGACAAGAGAAGAAAAATTCGCAAGGAAATCGTG‑CAAATAATCACGGATGTTATTCATAATTCTGACATTTTCAGCTTGGATAATGAAAACGCCCGTATAACACGTGATGAGTATCGTTATAACGAAATCTCGGTACGTTATCCCCAGACATTTGCACAAGTCCCCTGTCTTCGTCCATTTATTAAGCTGGAGTTGATGGAAAGCACTCTGCTGGAA > NZ_CP022686/1804909‑1805184
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
