Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A30 F36 I0 R1
|
275 |
10897.2 |
10515506 |
98.4% |
10347257 |
135.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,633,854 |
C→A |
29.7% |
V250V (GTG→GTT) |
yqeB ← |
selenium‑dependent molybdenum cofactor biosynthesis protein YqeB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,633,854 | 0 | C | A | 29.7%
| 302.6
/ 27.7
| 231 | V250V (GTG→GTT) | yqeB | selenium‑dependent molybdenum cofactor biosynthesis protein YqeB |
| Reads supporting (aligned to +/- strand): ref base C (28/99); new base A (61/2); total (129/102) |
| Fisher's exact test for biased strand distribution p-value = 3.35e-25 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 232 total aligned reads displayed.
ACATGATCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGGCGCAGG > NZ_CP022686/1633715‑1633986
|
tGATCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCAcc < 7:49520/140‑1 (MQ=255)
aTCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTg < 7:1148686/140‑1 (MQ=255)
cACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTa < 6:967516/140‑1 (MQ=255)
cACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTCACCtt > 3:962368/1‑137 (MQ=255)
cACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTAAccgt > 4:202830/1‑136 (MQ=255)
cTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCGCGTTATTTTTTACCAGTa > 2:426136/1‑138 (MQ=255)
ttAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAatat < 7:678265/140‑1 (MQ=255)
tAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAAAAtt > 6:519511/1‑140 (MQ=255)
aaaCCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTAACCTGTAataat > 1:1046271/1‑136 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGATAAACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCGCGGTTTTTTTGACCAGTAATATTTCttgcag > 7:789697/1‑135 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCGCGGTATTTTTGACCTGTAATATTTATGCCac > 5:247714/1‑139 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGcc < 1:85826/138‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGcc < 2:15397/138‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTAACCTGTAATATTTATTCCac > 5:718178/1‑139 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACAGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGcc < 2:375107/138‑1 (MQ=255)
gCATGATACAGACGTAGAGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGCATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTAAACTTTAATATTTTTGCCac > 5:623073/1‑139 (MQ=255)
ccATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGcc < 2:612733/137‑1 (MQ=255)
aTGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGGTTTTTTTACAGGTAATATTTATGGCaa > 3:176423/1‑137 (MQ=255)
aTACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCAc < 1:561548/138‑1 (MQ=255)
cAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTaa < 5:875886/140‑1 (MQ=255)
cAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTaa < 6:121704/140‑1 (MQ=255)
gACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATg < 6:1185551/140‑1 (MQ=255)
gTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATgg < 3:20604/138‑1 (MQ=255)
aGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGAt < 7:856874/140‑1 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCCTCATCACCCCACCCGGCGCGTGTTTTTTAACCAGTTATAATTCTTCCAGCAAGCAAAATGCGAta > 6:88258/1‑139 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCg > 8:588791/1‑137 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGAta > 6:600511/1‑139 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTAACCAGTAATATTTATGCCAGCACGCGAATGGCGAtc > 6:188811/1‑140 (MQ=255)
gcTACACCACTGGCGATATCCCCCGCACCGCGATTCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTGACCAGTTATATTTATGCCACCACGCTAAATGCGAtc > 3:1308116/1‑138 (MQ=255)
gcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCCCCAGCTGGTGTCCGGAAGGATGGGAAGGCTTCATCATCAACCCACCCGGCGCGAGATTTTTCACCTGTTATAATTCTGCCAGCACGCGAAAGGCGAtc > 4:914345/1‑138 (MQ=255)
gcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTTTTTTTCACCAGTAATATTTATTCCAGCACGCTAATGGGGAta > 4:276622/1‑137 (MQ=255)
gcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTGTTTTTTCACCGGTAATAATTCTGCCAGCACCCTAATGGCGCtc > 2:261131/1‑138 (MQ=255)
gcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTTAGCAGGTATATTTTTTCCCGCACCCGAAATGCGAta > 1:214212/1‑137 (MQ=255)
gcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTAAACTGTAATATTTATGCCAGCACCATAAAGTCGAta > 3:1328212/1‑137 (MQ=255)
gcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGCTGTCCGGAAGGATGAGAAGGCTTCATCATCACCCCCCCCGGCGCGGTTTTTTTAACCAGTAAGATTTATGCCCGCCCGCGAATGGCGaaa > 1:691637/1‑136 (MQ=255)
acacCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTAACCTGTATTATTTATGCCCGCACGCTAATTGGGGTCTCCTg > 8:856874/1‑140 (MQ=255)
ccacTGGCGATATCCCCCGCACCGCGCATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTgc < 2:1137041/138‑1 (MQ=255)
ccacTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCTCCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTgc < 4:786679/138‑1 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCGCGGTATTTTTAAGCTGTTATATTTGTTGCAGCCAGCAAATTGCGATATCCAgcggcgg > 7:556706/1‑139 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTGTGCCAGCACCCTAATGGGGGTCTCCTGCGGCGt > 8:837915/1‑140 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTCACCTGGAATATTTATGGCAGCACCCGAAAGGCGATCTCCTgccgggg > 6:47609/1‑135 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTTAACTGTAAAATTTTTTCCAGCACGGAAAATGCGATCTCCAgcggcgg > 5:341433/1‑139 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTTAACAGTAATATTTATGCCAGCCCCCGAAATGGGCTCTCCTgcggcgg > 8:489923/1‑139 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTAACCAGTAATATTTCTGCCAGCACGCTAATGGCGCTCACCTGCGGCGt > 8:415420/1‑140 (MQ=255)
ggCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTCAACAGGAATATTTATTCCAGCCCCCGAATGGCGATAGACTgcggcgg > 1:405962/1‑137 (MQ=255)
gCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTc < 8:1231200/140‑1 (MQ=255)
gATATCCCCCGCCCAGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCg < 8:18770/140‑1 (MQ=255)
gATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTc < 1:624060/138‑1 (MQ=255)
gATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCg < 6:244693/140‑1 (MQ=255)
gATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGACAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCg < 8:401664/140‑1 (MQ=255)
gATATCCCCCGCACAGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCGCTGGAATTTTAAACGGGTATATTTCTTCCATCAAGCTAATGGCGAGATCAGTCGGCGtttg > 4:244660/1‑137 (MQ=255)
atatCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTAACCTGTAATATTTCTTCCAGCCCGCGAATGGCGATCTCCTTCGGCGTTTACGc > 6:807687/1‑140 (MQ=255)
cccccGCACCGCGAATCACCTCCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCt < 7:409380/140‑1 (MQ=255)
cccccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCAc < 3:64797/138‑1 (MQ=255)
cccccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTGATTTTTCACCTGTAATATTTCTGCACGCACGCGAATGGCGATCGACTGGGGCGTGTCCGGAc > 1:1325723/1‑138 (MQ=255)
ccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCCTCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTAtg < 8:696749/140‑1 (MQ=255)
ccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCGCGGTTTTTTTGACCAGTAATATTTATGGCCGCCCGCGAATTGCGGTCTCCAGTGGCGTTTGCGCCCCTAtg > 8:1096789/1‑140 (MQ=255)
cACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTGGACTGTAATATTTCTGCCAGCACGCGAATGGCGTTCTCCTGCGGCGTTTCCGCACCAAtgt > 2:663449/1‑138 (MQ=255)
aCCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTGCCCGGTAAGATTTATGCCCGCACGCTAAAGGCGATCTACGGCGGCGTTTGCGCGCCAAtgtt > 1:949790/1‑138 (MQ=255)
ccGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTAACCAGTAATATTTATTCCAACACCCGAATAGCGAAATGCAGCGGCGGTTCAGCACCAAtgttt > 3:809377/1‑137 (MQ=255)
aaTCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCACCCCACCCGGCGCGGTATTTTTAACCTGTGATATTTATGCCAGCACGCGAAATGCGATCTCCTGGGGCGTTTCAGCCCCTATGGTGTAAcaca > 6:744457/1‑137 (MQ=255)
aaTCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCATCCGGCGCGTTATTTTTAACCTGTAATATTTCTTCCAGCACCCGAATGGCGCTCTCCTGCGGCGTTTCAGCACCTATTTTTTTAcc > 1:855241/1‑138 (MQ=255)
aaTCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTAACCGGTAATATTTATTGCCGCCCGCGAATTGCGATATGCTGCGGCGTTTCCGCACCAAtgttgttaac > 2:483308/1‑134 (MQ=255)
aaTCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTTACCTGTTATTTTTTTTCCAGCCCGCTAATGGGGGTCTCCTGCGGCGGTTCAGCACCAATGTTGTTAcc > 3:434242/1‑138 (MQ=255)
aTCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTTACCTGTTATATTTATGCCCGCCCGCTAATTGCGGTTTCATGGGGCGTTTACCCCCCGTTTTTGTTACCaaa > 8:905438/1‑139 (MQ=255)
accaccAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACggg < 5:188811/140‑1 (MQ=255)
accaccAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACggg < 8:631109/140‑1 (MQ=255)
accaccAGCTGGGGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGGTCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACg < 3:720796/138‑1 (MQ=255)
ccaGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGGTTTTTTAACCAGTAATATTTAAGGCAGCACGCGAATGGCGGTCTCCAGCGGCGTTTCCCCCCCAAAGTTGTTACCCACggggg > 4:404065/1‑136 (MQ=255)
cTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATg < 4:1290814/138‑1 (MQ=255)
tGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTTTTTTTGAACAGTTAAATTTATGCCACCCCCCTAATGGGGATCAACTGCGGCGGTTACGCACCTATGTTGTAACCAAAGGGCGCAAGt > 2:856907/1‑138 (MQ=255)
tGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTAACCTGTAAAATTTAATCCACCACGCGAAATGCGATATCCATCGGCGGTTCCGCACCTAATTTGTTACCAACGGGCGCATGt > 3:279839/1‑138 (MQ=255)
ggTGTTCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTAACCAGTAATATTTATTCCAGCACGCTAATTGCGCTATCCTGCGGCCTTTACCCCCCTATGTTGTAACCAACCGGCGCCTGTtaa > 6:293807/1‑140 (MQ=255)
ggTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTaaa < 7:466101/140‑1 (MQ=255)
ggTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTa < 2:209893/138‑1 (MQ=255)
ggTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGGATTTTTGACCTGGTATAATTATTCCAGCACCCTAATTGGGATTTACTGCGGGCTTTGCGCACCAATTTTGTAACCAACCGGGGCATGtt > 1:1076618/1‑137 (MQ=255)
tgtCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTTTTTTTAAACAGTAATATTTCTGCCACCACACTTAATGCGATATACAGCGGAGTTTGAGCCACAATGTTGTTACCCACGGGGGCATGTgaa > 4:674091/1‑138 (MQ=255)
tCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACg < 3:687455/138‑1 (MQ=255)
ccGGAAGGATGAGAAGGCATCCTCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACgg < 4:480824/138‑1 (MQ=255)
cGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTTTTTTTAACCTGTAATATTTATTCCAGCCCGCTAATTGCGATATCCTGCGGCGTTTACGCCCCAATGTTGTAACCAACGGGCGCATGGAAACGGGCa > 6:717590/1‑140 (MQ=255)
cGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCa < 7:162800/140‑1 (MQ=255)
gAAGGATGAGAAGGCTTCATCATCAACCCACCCGGTGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACg < 4:185895/120‑1 (MQ=255)
aaGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCaa < 1:426136/138‑1 (MQ=255)
aGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAAAGGGCAatat < 8:246447/140‑1 (MQ=255)
agaAGGCTTCATCATCAACCCACCCGGCGCGTTATTTATCACCTGTAATATTTCTGCCAGCACGCTAATGGCGAGATCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTGAACGGGCAATATGttctt < 6:992872/140‑1 (MQ=255)
tcatcctcaACCCACGCGGCGCGTTATTTTTCACCTGTAATAGTTCTGCCAGCACGCTAATGGCGAGCTCCTGCGGCGTTTCCGCACCTATGTAGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCa < 2:585762/138‑1 (MQ=255)
catcatcaACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTTCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCAACTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCAc < 4:1194272/138‑1 (MQ=255)
catcatcaACCCACCCGGCGCGTTATTTTTCACCAGTAATATTTCTGCCCCCACGCGAAAGGCGCTCTCCTTCGGCGGTTACCCACCTATGGTGTAACCCACGGGCGCATTTAAAAGGGGAATATTTTATTGCGCCAccc > 6:1065952/1‑138 (MQ=255)
catcatcaACCCACCCGGCGCGTTATTTTTAAACGGTAATATTTCTTCCAGCCCCCGAATGGCGCGCTCCTGCGGCGTTTCCGCACCTATGGTGTAACCAACGGGCGCATGTTAACGGGCAATATGTTCGTCAGCCAc > 2:927953/1‑138 (MQ=255)
tcatcaACCCACCCGGCGCGGTATTTTTCCACAGTAATAAATATGCCAGCACGCAAAAGGCGAACTCCTTCGGCGTTTACGCCCCGATGATGTAAACAAAAGGCGCATTTAAACAGGGAATAATTTGTTAAGCCACGc > 2:1260178/1‑138 (MQ=255)
acatcaACCCACCCGGCGCGTTATTTTTCACCTGTACTATTTCTGCCAGCTCGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCt < 7:1198468/139‑1 (MQ=255)
atcaACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCt < 3:46178/138‑1 (MQ=255)
cccGGCGCGTTATTTTTGACCTGTAATATTTGTGCCACCACGCGAATGGCGATCTCCTGCGGCGGTTACGCACCGATTTTGGAACACAAGGGCGGATGTAAACCGGCAATATGTTATTCAGCCACGCCATTCTCAAGcca > 8:356801/1‑138 (MQ=255)
ccGGCGCGGTATTTTTAACCTGTAATATTTCTGCCAGCCCGCTAATGGCGATCTCCAGCGGCGTTTCCGCACCGATGTTGTAACCAACGGGCCCATGGAAACGGGCAAAAATTTCTTCCGCCCCGCCTTTATCACGCa > 2:559133/1‑138 (MQ=255)
ggCGCGGTATTTTTGACCGGGTATATTTATGGCAGCACGCGAATTGCGATCTCCTGCGGCGTTTGCGCACCTATTTTGTTACCAAAGGGGGCATGTAAACGGGCAATATGTTCTTCCGCCACGCCATTCTCACGCAAt > 4:422427/1‑138 (MQ=255)
cgcgTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTg < 3:1050966/138‑1 (MQ=255)
tATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGGCGCa < 2:1221550/138‑1 (MQ=255)
tATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGGCGCa < 1:1219051/138‑1 (MQ=255)
tATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGGCGCAgg < 5:1268258/140‑1 (MQ=255)
tATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGGTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGGCGCAgg < 8:1052513/140‑1 (MQ=255)
|
ACATGATCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGGCGCAGG > NZ_CP022686/1633715‑1633986
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
