Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A28 F11 I0 R1
|
246 |
10296.8 |
9866480 |
98.4% |
9708616 |
135.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,633,861 |
A→T |
17.9% |
L248* (TTA→TAA) |
yqeB ← |
selenium‑dependent molybdenum cofactor biosynthesis protein YqeB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,633,861 | 0 | A | T | 17.9%
| 391.6
/ 21.8
| 207 | L248* (TTA→TAA) | yqeB | selenium‑dependent molybdenum cofactor biosynthesis protein YqeB |
| Reads supporting (aligned to +/- strand): ref base A (69/98); new base T (36/3); total (106/101) |
| Fisher's exact test for biased strand distribution p-value = 1.97e-09 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 207 total aligned reads displayed.
CTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGGCGCAGGAAAAGCTGAACCT > NZ_CP022686/1633724‑1633999
|
tAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTAACCTGTAATAtt > 4:537695/1‑140 (MQ=255)
tAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCCCGTTATTTTTAACCTGTAATAtt > 2:594919/1‑140 (MQ=255)
tcATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCCCCAGATGGTGTCAGGAAGGATGAGAAGGCTTCATCATCACCCCACCCGGCGAGTTATTTTGAACCTGTAATATTTATGCCAg > 8:666268/2‑140 (MQ=255)
gCATGCTACAGACGTAGCGCTACCCCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAg < 4:14292/140‑1 (MQ=255)
gCATGATACAGCCGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCCCCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGcc < 5:1087475/138‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGCTATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAg < 7:917945/140‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGCCTCACCACCAGCTGGTGTCCGGAAAGAGGAGAAGGCTTCATGATCAACCCCCCCGGCGCGGGATTTTTGTACTGTTATAtttaaggcag > 3:1055309/1‑133 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCCCCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATTTTTATGcccg > 7:803170/1‑138 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGcc < 5:79095/138‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCac > 3:897451/1‑139 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAg < 1:610620/140‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGGATTTTTAACCGGTAATATTTCTGCGAg > 2:1114329/1‑140 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTGCATCATCAACCCACCCGGCGCGGTTATTTTGACCAGTAATATTTATGCAAg > 7:488697/1‑140 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCACGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTTTTTTTCACCTGTAATATTTATGCCAg > 8:853086/1‑140 (MQ=255)
ccATGATAACGAAGTAGCGCTACACCACTGGCGATATCCCCCGCACCGAGAATCAAGACAAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCGACCCGGCGCGTTATTTTTCAGCTGTAATATTTCTGCCAg < 4:484923/139‑1 (MQ=255)
aCGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTTGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAAt < 6:269140/138‑1 (MQ=255)
gTAGCGCTACACCTCTGGCGATCTCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGCAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCg < 1:1014523/140‑1 (MQ=255)
gTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCg < 8:300915/140‑1 (MQ=255)
tAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCCCCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTCACCTGTAATATTTCAGCCACCACGCGAATGGCgc > 8:101226/1‑139 (MQ=255)
tAGAGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGATAAGTCTTCATCATCAACCCACCCGGCGCGTTATATTTCACCTGGAATAATTCTACCAGCACGATAAATGCGa > 2:1206345/1‑140 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCCCCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACACCCCCGGCGCGGTATTTTTGACCAGTAAAAATTATGACCGCACGCTAATggagcaa > 2:988030/1‑135 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCGCGGTTTTTTTAACCAGGATTTATTATGTCAGCACGCGAATTGCGCtc > 3:355285/1‑140 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTTAGCGGTAATTTTTTTTACCGCGCGCCAATGGCggtg > 1:833054/1‑137 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTCACCGGGAATATTTATGCCAGGACGCGAAgggggctg > 3:1179042/1‑135 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTAACCTTTAATATTTATGCCAGACCGCGAATTGCGaga > 4:322073/1‑138 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTAAACTGTAATTTTTATTCCAGCACCGAAATTGCGAta > 1:353643/1‑139 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGGTTTTTTTAACGGTAATATTTATGCCCGCCCCCGAATGGGGAtt > 1:272215/1‑139 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGGTTTTTTGCCGTGTAATTTTTCTGCCCCCACGCGAATGGccagc > 1:571982/1‑136 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCATTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGAtc > 3:1028287/1‑140 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTGCATCAGCACCCCACCCGGCGCGTGATTTTTACCCTGTATTATTTCTGGCAGCACGCTAATGGCCAtc > 8:813865/1‑140 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTGAATCATCAACCCACCCGGCGCGGTATTTTTGCGCAGGTATATTTATGCCATCACGCAAATGGCGagc > 3:922248/1‑138 (MQ=255)
caccacTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTAAACTGTAATATTTATTCCACCACCCGAATAGCGAtcgactgg > 7:13562/1‑134 (MQ=255)
accacTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTGACCAGGTATATTTATGCCCGCACCCTAATGGCGCTCTCCAgcc > 8:424647/1‑139 (MQ=255)
ccacTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCACCCCACCCGGCGCGGTTTTTTTAAACTGTTATATTTATGCCAGCAAGGAAATGGCGATGTccggg > 6:605329/1‑135 (MQ=255)
cacTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTTTTTTTCACCGGTTATATTTCTGCCCGCACGCGAATGGCGGTCTCCTgcggc > 2:687755/1‑140 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCCCCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTGACCGTTTATATTTCTGCCCGCCCCCTAATGGCGGTCGCCTgcggcgg > 4:1046414/1‑139 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCACCCCACCCGGCGCGGTATTTTTGACCAGGAATATTTATGGCCGCACCCTAATTGCGCTCTACTgcggcgg > 3:879536/1‑139 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTGAACTGGTATATTTTTGGCAGCCCGCGAATGGCGATAGCCTGCGGGGt > 7:28465/1‑140 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTTACCAGTGAAATTTATGGCCGCCCGCAAAAGGGGCTCTCCAgcggcgg > 3:402743/1‑139 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTAACCTGTAATATTTATTCCAGCACGCTAATGGCGATCTCCTGCGGCGt > 4:107193/1‑140 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATAATCAACCCACACGGCGCGTTAATTTTCACCGGTAATATTTCTGCCAGCACCCGAATGGCGCTCTCCTGCGCCGt > 4:988198/1‑140 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCGTCATCATCAACCCACCAGGCGCGGTATTTTTCACCTGGAATATTTATTACACCACCCAAATGGGGAACACCTACGGCGt > 4:56038/1‑140 (MQ=255)
ggCGATATCCCCCGCCCCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCCTCATCAACCCACCCGGCGCGGTTTTTTTCTCCGGTAATATTTATGGCGACCCGCGATTGGGGGTATACTgcggcgg > 6:857139/1‑137 (MQ=255)
ggCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTCACCTGTAATATTTATTCCCGCACGCTAATGGCGCACTCCAgcggcgg > 6:471794/1‑137 (MQ=255)
gCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTc < 4:650281/140‑1 (MQ=255)
gCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTCACCGGTAATATTTCTGCCAACACGCGAATTGCGCTCTCCTGCGGGGTTTc > 4:115366/1‑140 (MQ=255)
gATATCCCCCGCACCGCGAATCACCACCAGCTGTTGTCCGGAAGGATGAGAAGTCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTTTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCg < 1:460482/140‑1 (MQ=255)
gATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGACGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCg < 3:29549/140‑1 (MQ=255)
gATATCCCCCGCACCGCGAATCACCAACAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCg < 7:1007070/140‑1 (MQ=255)
gATAACCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATATTTCACCTGAAATATTTCTGCCACCACGCTAATGGCGATCTCCTGCGGCGTTTCCg < 4:633720/140‑1 (MQ=255)
atatCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTAACCGGTAATATATATGCCACCACCCAAATTGCGAGGACCAGCGGCGGTTACGc > 2:176623/1‑140 (MQ=255)
atCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTAACCTGTAATATTTATGCCCGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCAc > 4:1183761/1‑140 (MQ=255)
atCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTAACCGGTTATATTTATGCCAGCACGCGAATGTGGAGATCCAGCGGCGGTTTCgg > 6:319264/1‑137 (MQ=255)
atCCCCCGCACCGCGAATCACCAACAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTAAACTGGTATTTTTATTCCAGCACGCGAATGGCGTTCTCCTGCCGCGGTTCGGccc > 8:746861/1‑138 (MQ=255)
atCACCCGCACCGCGAATCACCACCAGCTGGTGTCCTGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGGTTCCGCAc < 2:414578/140‑1 (MQ=255)
cccccGCACCTCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCt < 3:935298/140‑1 (MQ=255)
cccccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCt < 1:1132305/140‑1 (MQ=255)
cccccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCt < 8:511234/140‑1 (MQ=255)
ccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCTCCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTAtg < 2:771405/140‑1 (MQ=255)
ccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTAtg < 4:913556/140‑1 (MQ=255)
cGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGGATTTTTGACCGGTTATATTTATGCCAGCACCGTAATTGCGATCACCTGCGGCGTTTGCGCACCAAttt > 8:613979/1‑138 (MQ=255)
cgAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCCTCATCAACCCACCCGGCGCGGTTTTTTTCAGCTGTAATATTTCTGGCCCCACGCGAATGGCGCTCTCCTGCGGCGGTTCCGCACCTATGGTTTAAcc > 2:288444/1‑140 (MQ=255)
cgAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTTACCGGTTATATTTATGCCACCCCGCTATAGGCGAAAGCCTGCGGGGGTTTCTCACCTAAGTTGTAAcc > 3:151705/1‑140 (MQ=255)
gAATCACCACCCGCTGGTGTCCGGAAGTATGCGAAGGCTGCATCATCAACCCACCCGGCGCGTTA‑TTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCaa < 3:1139760/140‑1 (MQ=255)
aaTCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCaa < 7:954783/140‑1 (MQ=255)
aTCACCA‑CAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCACCCCACCCGGCGCGGTTTTTTTAACCTGGAATATTTCTGCCAGCACGCTAATGGCGTTATCCTTCGGCGTTTACGCCCCTAATTTGTAACCaa > 6:772701/1‑138 (MQ=255)
tCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTATTCCAGCCCGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCaa > 6:682490/1‑138 (MQ=255)
tCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTCCCCTGTTATGTTTATGCCCGCCCGCTAATGGCGCTCACCATCGGCGTTTCCGCCCCAAAGTTGGAACCac > 6:100650/1‑137 (MQ=255)
cccaccaGCTGGTGTCCGGAAGGATGCGAAGGCTTCATCATCTCCCCCCCCGGCGCGTTATTTTTCTCCTTTAATATTTCTGCCAGCACGCTAATGGAGATCTACTGCGGCGTTTCCGCACCTATGTTGTAACCAACggg < 4:1112273/139‑1 (MQ=255)
accaccAGCTGGTGTCCGGCAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACggg < 1:1273166/140‑1 (MQ=255)
accaccAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACggg < 1:1108344/140‑1 (MQ=255)
accaccAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACg < 6:1138102/138‑1 (MQ=255)
acaaccaGCTGGGGTCCGGAACGATGAGATCGTATCATAATGAACCCACCCGGCGCGTTATTTTTCTCATGTAATATTTCTGCCAGCACGCTAATGTCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACggg < 8:1145170/137‑1 (MQ=255)
ccaGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGgcg < 6:503649/138‑1 (MQ=255)
gCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCGCGGTTTTTTTACCAGGGTATATTTAGGGCCACCCGCGAATTGGGACCTCCGGCGGCGTTTGCGCGCCTATGTTGGTAACAACGGgcggctgt > 1:1186766/1‑135 (MQ=255)
gCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTTTTTTTGACCGGTTATATTTATGGCAGCACGCTTATTGCGATATACTGCGGGGTTTAAGCACCTATTTTGTAACCAACGGGCGCATGt > 2:1174062/1‑140 (MQ=255)
ggTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTaaa < 3:441688/140‑1 (MQ=255)
ggTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGAACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTaaa < 4:399233/140‑1 (MQ=255)
gtCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACgg < 3:33239/140‑1 (MQ=255)
cGGAAGGATGAGAAGGCTTCATCATCAACCCAGCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCa < 7:758157/140‑1 (MQ=255)
cGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTTACCTGTTATATTTATGCCAGCACGCTAATGGCGATCTCCAGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCa > 4:803256/1‑140 (MQ=255)
cGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCa < 3:588644/140‑1 (MQ=255)
cGGAAGGATGAGAAGGCTTCATCAGCAACCCACCCGGCGCGTAATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCa < 7:556715/140‑1 (MQ=255)
aaGGATGAGAAGGCTTCATCATCAACCCACCCGGCTCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACAGGCGCATGTAAACGGGCaa < 6:95789/138‑1 (MQ=255)
tGAGAAGGCTTCATCATCAGCCCACCAGGCGCGGTTTTTTTAACCTGTTATAAATCTGCCAACCAGCTAAAGGCCTTCTCCTTCGGCGGTTCCCCACCGAATGTGTTACAAACGGGCCCATGAAAACCGGGAAAATGttt > 2:550275/1‑139 (MQ=255)
tGAGAAGGCTTCATCATCAACCCACCGGCCGCGGTTTTTTTAACCAGGAATATTTTTTACATAACGCTTATGGAGATCCACTGCAGCGTTTGCGCCAAAAAGTGGTGACCGAACGGCGGATGTAATCGGCGAATATGttg > 8:535817/1‑139 (MQ=255)
tGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTCACCAGTTAAATTTATGCCAGCACGCGAATGGCGGTCTCCTGCGGCGTTTCCGCCCCAATGTTGTAAACCACGGGCGCATGTAAACCGGCAATATGttt > 2:1184605/1‑139 (MQ=255)
gagaAGGCGTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGttct < 2:1146387/140‑1 (MQ=255)
agaAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTGACCGGTAATATTTATGCCAGCACGCGTATGGCGATCTCCTGGCGCGGTTACGGCCCCATGTTGTAACCCACGGGCGCATGTAAAAGGGGAATATGttg > 5:897452/1‑137 (MQ=255)
cTTCATCCTCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCa < 4:1233544/140‑1 (MQ=255)
ttCATCATCAACCCACCCGGCGCGTTATTTTTAACCTGGAATATTTCTTCCCGCACGCGAATGGCGATCTCCTGCGGCGTTTACGCCACGATTTTGTAACCACAGGGCGCATGTAAACGGGGAATATGttattgcgcc > 6:16569/1‑133 (MQ=255)
ttCATCATCAACCCACCCGGAGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGcc < 5:282499/138‑1 (MQ=255)
acccacccGGCGCGTGATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCa < 3:817569/140‑1 (MQ=255)
cgcgTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTg < 5:57587/138‑1 (MQ=255)
tttttCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGGTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACTCAATTGGCGCAGGaa < 3:1118732/140‑1 (MQ=255)
cACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGGCGCAGGAAAAGCt < 2:862301/140‑1 (MQ=255)
cTGAAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGATGTAACCCACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGGCGCAGGAAAAGCTg < 5:240612/138‑1 (MQ=255)
tGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGGCGCAGGAAAAGCTGAAc < 7:385894/140‑1 (MQ=255)
gTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCACTTGGCGCAGGAAAAGCTGac > 6:292777/1‑137 (MQ=255)
gTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGGCGCAGGAAAAGCTGAAcc > 1:767737/1‑140 (MQ=255)
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CTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGGCGCAGGAAAAGCTGAACCT > NZ_CP022686/1633724‑1633999
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
