Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A26 F12 I0 R1
|
131 |
9881.0 |
7547414 |
98.3% |
7419107 |
134.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,640,925 |
A→C |
15.7% |
R7S (AGA→AGC) |
ygfM → |
molybdopterin‑dependent oxidoreductase FAD‑binding subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,640,925 | 0 | A | C | 15.7%
| 173.1
/ 9.3
| 116 | R7S (AGA→AGC) | ygfM | molybdopterin‑dependent oxidoreductase FAD‑binding subunit |
| Reads supporting (aligned to +/- strand): ref base A (49/46); new base C (4/17); total (53/63) |
| Fisher's exact test for biased strand distribution p-value = 7.67e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 116 total aligned reads displayed.
CATTTATGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGG > NZ_CP022686/1640791‑1641061
|
attttATGCGAAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGTATGGAGGCGCTGGCATAAATAACA‑GCTCCCCTCTTATTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGAccc < 8:361977/136‑1 (MQ=255)
ttAGGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGAGGGATGCGCTGGCATAAATAACA‑GCTCCCCTCTTCTTTCAGAGACGAGGGGAAATTAAGGAAAGACGATGATTCAACAATTTTTCAGACCCGActc < 4:343991/140‑1 (MQ=255)
ggcgcAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACA‑GCACCCCTCTTCTTTCAGAGAAGAGGGGAAATTACGGAAAGACGATGATTGAACAATTTTTCAGACCCGActct < 1:921235/137‑1 (MQ=255)
aGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACA‑GCTCCCCTCTTCTTTCAGCGAAGAGGGGATATTAAGGAAAGACGATGATTGAACAATTTTTAAGACCCGACTCTGGCGaa > 2:724056/1‑138 (MQ=255)
aGCCAGAAAAGCCGCTGCAAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGTAAATTAAGGAAACACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACa < 4:728234/140‑1 (MQ=255)
cAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACaa > 2:351760/1‑138 (MQ=255)
taaaaGCCGCTGCCAGTATGTGGCGTCGTATGTATGCGGTGGCAAAAATAACA‑GCTCCCATCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTTAAAAATTTTTCAGACCCGACTCTGTCGAACAAgcgc < 4:856369/139‑1 (MQ=255)
caaaaGCCGCTGCCCGTATGGGTCGGCGGATGGAGGGGCTGGCATAAATAACC‑GCTCCCCTCTTCTTTCAGAGCAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAgc < 8:109537/137‑1 (MQ=255)
gCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATACATAACA‑GCTCCCCTCTTCTTTAAGAGAAGAGGGGCAATTAAGGAAAGACGGTGAATGAACTATTTTTCAGACACGCATCGGTCGCACAAGCGCTTGagc > 7:567296/1‑136 (MQ=255)
gCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAGCAATTTTTCCGACCCGACTCTGTCGCACAAGCGCTGGAAc > 2:383816/1‑138 (MQ=255)
gCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTAAGACCCGACTCTGTCGAACAAGCGCTGGAACTg > 4:726081/1‑140 (MQ=255)
tGCCAGTATGTGGCGTCGGTTGGATGAGCTGGCATAAATAACA‑GCTCCCCTGTTCTTTCTGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGCCCCGGCTCGGTCGAACAAGCGCTGGAACTg > 1:713895/1‑138 (MQ=255)
gtgtCGTCGTATGTTTGCGGTTGCAAAAATACCT‑GCTCCCATATTCTTTCAGTGATGTGGGTAAATAAAGTAATTAGGATGTTTGAACATTTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGcgccgc < 8:627933/138‑1 (MQ=255)
tgGCGTCGCATGGATGCGCTGGCATAAA‑AACACGCCCCCCACTTCTTACCCATAAGAGGGTAAATAAAGGAACGACGATGATTGAACAATTTTTCACACCCGACTCTTTCGAACAAGCGCTGGAACTGAAGCGCCGCt < 6:738331/138‑1 (MQ=255)
gCGTCGGATGGATGCGCTGGCATAAATAACA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCTACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCa > 3:62396/1‑140 (MQ=255)
gTCGGATGGATGCGCTGGCATAAATAACA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCa > 7:847501/1‑138 (MQ=255)
ggatggatGCGCTGGCAAAAAAAACA‑GCCCCCCTCTTCTTTCATAGACGCGGGGAAATTAAGGAAAGACGATTATTCAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGa < 8:400368/138‑1 (MQ=255)
gatggatgCGCTGGCATAAATAACA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGAt > 5:866677/1‑138 (MQ=255)
gatggatgCGCTGGCATAAATAACA‑GCTCCCCTCTTCATTCAGAGAAGAGGGGAAATTAATGAAATACGATGATTGAACAATTTTTCAGCCCCGACTCTGGCGAACCAGCTCTGGAACTGAAGCGCCGCGACCAGCAt > 8:606756/1‑138 (MQ=255)
ttggatgCGCTGGCATAAAAAACA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATg < 8:306590/137‑1 (MQ=255)
ttggatgCGCTGGAATAAATAACA‑GCTCCCCTCTTCTTTCAGCGAATAGGGTAAATTAAGGAAAGACGATGATTTAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATg < 8:621539/137‑1 (MQ=255)
tggatgCGCTGGCATAAATAACA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGa > 1:663902/1‑138 (MQ=255)
gggatgCGCTGGAATAAAAAACA‑GCACCCCTCTTCTTTCAGAGAAGAGGGTAAATTAAGGAAAGACGATGATTCAAAAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGa < 5:35469/137‑1 (MQ=255)
gcgcGGGCATAAATAACC‑GCTCCCCTCTTCTTTCAGACACGTGGGTAAATTAAGGAAAGACGATGATTCACCAATTTTCCCGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCg < 1:13800/138‑1 (MQ=255)
cgcTGGCATAAATAACA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCgg > 1:938586/1‑137 (MQ=255)
cTGGCATAAATAACA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTAAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGGCt > 7:673356/1‑138 (MQ=255)
ggCATAAATAACA‑TCTCCCCTCTTCTTACAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTgg > 1:396618/1‑138 (MQ=255)
ggCATAAATAACA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTgg > 1:508405/1‑138 (MQ=255)
ggCATAAATAACA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTgg > 1:494271/1‑138 (MQ=255)
ataaataaCA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGATCAAGCGCTGGAACTGAAGCGCCGCTACCAGGATTAAGCCGTCTGGTTc > 5:717524/1‑138 (MQ=255)
ataaataaCA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGc > 4:628984/1‑140 (MQ=255)
aaaaaaaCA‑GCCCCCCTCTTCTTTCAGACAAGAGGGTAAATTAAGCAAAGACGATGATTCAACAATTTTACACCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGcc < 3:747882/139‑1 (MQ=255)
aaataaCA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGc > 5:36731/1‑138 (MQ=255)
aCA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCgggg > 1:110157/1‑138 (MQ=255)
cA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgca > 3:422240/1‑140 (MQ=255)
cA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgca > 4:261766/1‑140 (MQ=255)
cA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgca > 4:469131/1‑140 (MQ=255)
tcTCCCCTCTTGTTCAATACAAGTGGGGAAATTAAGGAAAGACGATTATTGAACAATTTTCCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGAAGAAGCCGTCTGGTTCGCCGGGGgcagc < 4:736396/139‑1 (MQ=255)
gCTCCCCTCTTGTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGACGCTACCAGCATGAAGCCGTCTGGATCGCCGGGGgca > 7:653998/1‑138 (MQ=255)
gCTCCCCTCTTCTTTCCCAGAAGAGGGTAAATTAAGCAAAGACGATGATTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgcagc < 4:450162/140‑1 (MQ=255)
gCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgcc > 6:905803/1‑137 (MQ=255)
gCTCCCCTCTTCTTTCAGAGAAGAGGGGAAAGTAAGGAAAGACGATGATTGAACAATTTTTCAGCCCCGCCTCTGGCGCACCAGCGCTGTCCCTGAAGCGCCGCTCCCAGGATGAAGCCGTCTGGTTCGCCGGGGgcc > 1:207803/1‑137 (MQ=255)
ccTCCCATGTTCTTTCAGAGACGTGGGTAAATTAAGTAACGACGATGATTCAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgca < 1:602839/137‑1 (MQ=255)
tCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGATCAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGACGCCGTCTGGTTCGCCGGGGgcagc > 7:560810/1‑138 (MQ=255)
tCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGgcagc > 6:6521/1‑138 (MQ=255)
cccgTCTTCTTTCTTAGAAGTGTGTAAATTAATTAAAGACGTTGATTGAACTATTTTTCAGACCCGCCTCTGGCGAACAAGCTCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 3:410768/140‑1 (MQ=255)
cccTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAAc > 3:409636/1‑140 (MQ=255)
cgtctgctTTCAGAGACTAGGGTATATTATGGAACGACGATGATTGCACAATTTTTCCTACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 6:422020/136‑1 (MQ=255)
ccTCTTCTTTCCGAGACGAGGGTAAATAATGGAAACCCGATGATTCAAATATTTTTCTCACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 2:298527/138‑1 (MQ=255)
ccTCTTCTTTCATATAAGAGGGTAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 6:79743/138‑1 (MQ=255)
ccTCTTCTTTCAGAGATGTGGGGAAATTAAGGAAAGACTATGATTCAACAATTTTTCATACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 2:508405/138‑1 (MQ=255)
ccTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 2:264461/138‑1 (MQ=255)
ccTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAAAAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 4:336766/140‑1 (MQ=255)
ccTCTTCTTTCAGACAAGAGGGTAAATTAAGGAAAGACTATGATTGAACAATTTTACAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 2:594034/138‑1 (MQ=255)
ccTCTTCTTTAAGAGATTTGGTGAAATTAAGGAAACACTTTGATTCAAAAATTTTTAATCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 6:74275/138‑1 (MQ=255)
ccTCTTCTTACACATAAGAGGGGAAATTAAGTAAAGACTATGATTGAACAATTTTTCCGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 8:491972/138‑1 (MQ=255)
ccTCTTCTATCAGAGAAGAGGGTAAATTAAGTAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACt < 4:711797/140‑1 (MQ=255)
ccTCTTATTTCAGAGAAGAGGGGAAATTAAGGAAAGACTATGATTTAACATTTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 7:724981/138‑1 (MQ=255)
ccTATTATTTCAGTCAATATGTGAAATTAATGATACACTTTGATTGCACATTTTTTCAGCCCCGACTCTGTCGAACAAGCGCTTGAACTGAAGCGCCGCTACCAGGCTGAAGCCGTCTGGTTCGCCGGGGGCATCaaa < 5:859225/138‑1 (MQ=255)
cagctttttTCAGAGAAGAGGGGAATTTACGCAACTCCCTTTATTTCACATTTTTTCACCCCCGACTCTGTCGAACAAGCGCTGTAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCaaa < 7:182492/135‑1 (MQ=255)
gtattgtttCAGAGATGTGGGGAATTTAAGTAACTATGTTTTTTGAACATTTTTTCAGACCCGACTCTGTCGAACAAGAGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAAc < 2:655823/132‑1 (MQ=255)
ctctTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCCCACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAAc < 7:729450/138‑1 (MQ=255)
ctctTCTTTCAGAGAAGAGGGGAAATGAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAAc > 1:972927/1‑138 (MQ=255)
attcttTCAGAGATGTGGGTAAATTAAGTAAACCCGCTGATTGAAAAATTTTTCATACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTc < 6:805809/137‑1 (MQ=255)
tcttTCTGACAAGAGGGGAAATTAAGTAAAGACGATGTTTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACg < 4:588704/140‑1 (MQ=255)
tcttTCATATAAGAGGGTATATTAAGGAAAGACGATGATTTAACATTTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCaa < 2:590821/138‑1 (MQ=255)
tcttTCAGAGAAGAGGGGAAATTAATCAAAGACGATGATTCAACAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCaa < 5:324372/138‑1 (MQ=255)
tatttCAGATAAGAGGGGAAATTAAGGAAACACTATTATTCAACAATTTTTCACCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACg < 4:633554/138‑1 (MQ=255)
atttCAGAGAAGAGGGTAAATTAAGGAAACACGATGATTTAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGc < 3:94623/139‑1 (MQ=255)
ctgagtAGTGGGTAAATTATGTAAAGACGATTATGTAATAATTTTTCAGCCCCTACTCTGTCGACCAAGCGCTGGACCTGAAGCGCCGCTACCAGGATGAAGCCGTCGGGTTCGCCGGGGGCAGCAAACTCAACGCTa < 8:128860/136‑1 (MQ=255)
ccgagaAGAGGTTAAATTACGGAAAGCATATTATTCAACAATTTTTCTGCCCCGACTCTGTCTAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTaca < 4:678207/138‑1 (MQ=255)
agggaagaGGGGAAATTAAGGAAAGACGATGATTGAACAATATTTCAGACCCGACTCTGTCGAAAAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGGCTGGTTCGCCGGGGGCAGCAAACTCAACGCTac > 7:677527/4‑138 (MQ=255)
agagAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTacac > 4:314787/1‑140 (MQ=255)
tagaagaGGGTAAATTAAGGAAAGACTATGATTTAAAAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTaca < 2:908569/137‑1 (MQ=255)
agaagaGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTacac > 2:708503/1‑138 (MQ=255)
agGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAAcc > 2:573799/1‑138 (MQ=255)
agGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCg > 4:23450/1‑140 (MQ=255)
agGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGGCTGGTTCGCAGGGGGCAGCAAACTCAACGCTACACCAAcc > 8:384283/1‑138 (MQ=255)
ttaatttAAGGAAAGACGTTGATTTAACAATTTTTCCCCCCCGACTCTGTCGACCAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGt < 8:653998/133‑1 (MQ=255)
ggAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTCCCAGGATGAAGCCGTCTGGATCGCCGGGGGCAGCAAACTCAACGCTCCACCCACCCGt > 6:883017/1‑138 (MQ=255)
atAAGGAAAGACGATGAATGAACACTTTTTCAGCCCCGTCTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGTGGGCAGCAAACTCAACGCTACACCAACCCGTACCGa < 8:576430/137‑1 (MQ=255)
aaaGACGATTATTGAAAAATTTTTCAGCCCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATaaaaa < 1:222424/138‑1 (MQ=255)
aaGACGATTATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGAt < 3:484058/140‑1 (MQ=255)
aCGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCCGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGAtt > 1:328431/1‑138 (MQ=255)
tatgatTTAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGc < 2:894094/137‑1 (MQ=255)
tatgatTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGc < 5:797060/137‑1 (MQ=255)
gatTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCAt > 8:33720/1‑138 (MQ=255)
atTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGGACCGTTAAAACGATTGCCAtttg > 3:172889/1‑139 (MQ=255)
tGAACAATTTTTCAGACCCGACTCTTTCGAAAAAGCGCTGGAACTGAAGCGCCGCTACCTGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAGCTCTACACCAACCCGTCCCGATAAAAAGATTGCAATTTc > 6:306798/1‑138 (MQ=255)
taaaaaTTTTACCGCCCCGCCTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTcc < 6:254714/134‑1 (MQ=255)
aaCAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg > 4:825646/1‑140 (MQ=255)
cAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCACCGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg > 7:468823/1‑138 (MQ=255)
cAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg > 1:469202/1‑138 (MQ=255)
aaaTTTTTCAGACCCGACTATTTGTAACAAGCGCTGTAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACAGATAAAAAGATTGCCATTTCATTGCa < 3:183208/139‑1 (MQ=255)
aaaTTTTCAAGACCCGACTCTGTCGAACAAGCGCTGTAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGTGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg < 7:700309/137‑1 (MQ=255)
aaaTTTTACAGACCCGACTCTGTCGAACAAGCGCTGTCACTGACGCGCCGCTACCAGGATGAAGCCGACTGGCTCGCCGGGGGCAGCAAACGCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTg < 7:285160/137‑1 (MQ=255)
tttCAGACCCTACTCTGTCGAAAAAGCGCTGTAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATc < 3:325788/140‑1 (MQ=255)
tCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGCTTGCCATTTCCTTGCAGGAtg > 7:650893/1‑137 (MQ=255)
tCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATc > 7:819775/1‑138 (MQ=255)
gACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTgg < 1:573799/138‑1 (MQ=255)
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CATTTATGCGCAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATAACA‑GCTCCCCTCTTCTTTCAGAGAAGAGGGGAAATTAAGGAAAGACGATGATTGAACAATTTTTCAGACCCGACTCTGTCGAACAAGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAACGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTGCAGGATCTGG > NZ_CP022686/1640791‑1641061
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
