Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F5 I97 R1
|
275 |
44.0 |
1733530 |
96.5% |
1672856 |
122.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NZ_CP009273 |
757,924 |
T→C |
L316P (CTG→CCG) |
odhB → |
2‑oxoglutarate dehydrogenase complex dihydrolipoyllysine‑residue succinyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP009273 | 757,924 | 0 | T | C | 100.0%
| 131.8
/ NA
| 39 | L316P (CTG→CCG) | odhB | 2‑oxoglutarate dehydrogenase complex dihydrolipoyllysine‑residue succinyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (17/22); total (17/22) |
TTTCTACGCCGCGCGGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCTGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACGCTATCAAAGATCGTCCGATGGCGGTGAATGGT > NZ_CP009273/757795‑758057
|
tttCTACGCCGCGCGGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCggggg > 2:483073/1‑139 (MQ=255)
cgcgcgGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTtcac > 1:533098/1‑139 (MQ=255)
gcgcgGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTtcacc < 1:4275/139‑1 (MQ=255)
cgcgGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGa > 1:739120/1‑121 (MQ=255)
cgcgGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGa < 2:739120/121‑1 (MQ=255)
cgcgGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTtca > 2:606252/1‑136 (MQ=255)
cgcgGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTtca < 1:606252/136‑1 (MQ=255)
cgGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTtcaccatc < 1:472051/139‑1 (MQ=255)
ccGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTtca < 2:632714/121‑1 (MQ=255)
ccGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTtca > 1:632714/1‑121 (MQ=255)
ccGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGgtggtg > 1:79752/1‑139 (MQ=255)
cGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCgg < 2:95327/137‑1 (MQ=255)
cGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCg < 2:315634/136‑1 (MQ=255)
aTGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCt < 2:79752/139‑1 (MQ=255)
tGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCt > 1:360367/1‑138 (MQ=255)
tCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGcc > 1:378319/1‑139 (MQ=255)
cGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACg > 2:786018/1‑136 (MQ=255)
cGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGcc > 2:721604/1‑138 (MQ=255)
ggCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGa > 1:750947/1‑139 (MQ=255)
tcAGGCAGCGAGAAGAAAAGCAAAGAGCTGGCAGACAAAGGCCGTGACGGCAAGCTGACCGTGGAAGATCCGCCCGGTGGTAACTTCACCATCACCAACGGTGGGGTGTTCGGTCCCCTGATGTCTCGGCCGatcacaa < 2:616265/138‑4 (MQ=255)
gCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTa > 2:709020/1‑127 (MQ=255)
gCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTa > 2:806048/1‑127 (MQ=255)
gCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTa < 1:806048/127‑1 (MQ=255)
gCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTa < 1:709020/127‑1 (MQ=255)
cAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCaa > 1:29431/1‑139 (MQ=255)
gaaAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAgc < 1:211252/139‑1 (MQ=255)
aaaGAGCGGGCAGTCAAAGGCGGTGACGGCAAGCTGACGGGTGAAGTCCCGACCGGTGGTAACTCCACCATCACCAACGGGGTTGTTTTGGGTTCCCTGATGTTTACGCCGATCATCACCCCGCCGCAGAGCGCAATTc < 1:387929/139‑1 (MQ=255)
cAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCa < 2:360367/139‑1 (MQ=255)
gtaaaaGGCCGTGACGGCAAGCTGCCCGTTGAAGACCCGCCCGGTGGTAACTTCCCCATCACCACCGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACg < 2:378319/136‑1 (MQ=255)
gTCAAAGGCCGTGACGGCAAGCTGCCCGTTGAAGATCCGACCGGTGGTACCTTCCCCATCACCAACGGTGGTGTGTTCGTTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACg < 2:204392/139‑1 (MQ=255)
gTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACg < 1:721604/139‑1 (MQ=255)
gTCAAAGGCCGTGACGCCAAGCTGACCGTTGAATATCCGCCCGGTGGTAACTTCACCATCACCAACGGTGGTGTTTTCGTTTCCCTGATGTCTACCCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACg < 1:459107/139‑1 (MQ=255)
tGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCt > 1:798715/1‑75 (MQ=255)
tGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCt < 2:798715/75‑1 (MQ=255)
aGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCg < 2:477794/80‑1 (MQ=255)
aGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCg > 1:477794/1‑80 (MQ=255)
aCCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACGCTATCAAAGATCGTCCGATGGCgg > 1:852660/1‑139 (MQ=255)
ttGAAGATCCGCCCGGTGGTAACTTAACAATCACCAAGGGTGGGGTGTGCGGTTCCCGGATGTCTACGCCGATCATAAACCCGCCGCAGAGCGCAATTCTGGGTATGCACGCTATCAAAGATCGTCCGATGGCGGTGaa < 2:182633/139‑1 (MQ=255)
aGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACGCTATCAAAGATCGTCCGATGGCGGTGAATGGt < 1:370616/139‑1 (MQ=255)
|
TTTCTACGCCGCGCGGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCTGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACGCTATCAAAGATCGTCCGATGGCGGTGAATGGT > NZ_CP009273/757795‑758057
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGTTTCTACGCCGCGCGGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCTGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACGCTATCAAAGATCGTCCGATGGCGGTGAATGGTCAGGTTGAGAT > NZ_CP009273/757793‑758068
|
GGTTTCTACGCCGCGCGGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACC > SRR3722120.540665/1‑151 (MQ=60)
TTTCTACGCCGCGCGGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACctgtctct > SRR3722120.749142/1‑143 (MQ=60)
GCCGCGCGGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAAC < SRR3722120.614669/151‑1 (MQ=60)
CGCGCGGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGG < SRR3722120.4327/151‑1 (MQ=60)
GCGGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGG < SRR3722120.478887/151‑1 (MQ=60)
GCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACctgtctct > SRR3722120.641459/1‑143 (MQ=60)
GCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGT > SRR3722120.80792/1‑151 (MQ=60)
GTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTG > SRR3722120.365601/1‑150 (MQ=60)
TGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCG > SRR3722120.383893/1‑151 (MQ=60)
TCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGAT > SRR3722120.761106/1‑151 (MQ=60)
agCCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATC < SRR3722120.816918/149‑1 (MQ=60)
agCCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATC < SRR3722120.718694/149‑1 (MQ=60)
CCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAAC > SRR3722120.29766/1‑151 (MQ=60)
GCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCTGtctcttatacacatctccgagcccacgagactaaggcgaatctcgtatgccgtcttctgcttgaaaaaacaaa > SRR3722120.820691/1‑77 (MQ=60)
AGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGG < SRR3722120.214168/151‑1 (MQ=60)
CAAAGAGCGGGCAGTCAAAGGCGGTGACGGCAAGCTGACGGGTGAAGTCCCGACCGGTGGTAACTCCACCATCACCAACGGGGTTGTTTTGGGTTCCCTGATGTTTACGCCGATCATCACCCCGCCGCAGAGCGCAATTCTGGGTATGCAC < SRR3722120.393621/151‑1 (MQ=60)
AGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACGCTATCAAAGAT < SRR3722120.731417/151‑1 (MQ=60)
AGTCAAAGGCCGTGACGCCAAGCTGACCGTTGAATATCCGCCCGGTGGTAACTTCACCATCACCAACGGTGGTGTTTTCGTTTCCCTGATGTCTACCCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACGCTATCAAAGAT < SRR3722120.465783/151‑1 (MQ=60)
GTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCtgtctcttatacacatctccgagcccacgagactaaggcgaatatcgtatgcc > SRR3722120.809453/1‑98 (MQ=60)
CCGTGACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCctgtctcttatacacatctccgagcccacgagactaaggcgaatctcgg > SRR3722120.484695/1‑102 (MQ=60)
ACGGCAAGCTGACCGTTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACGCTATCAAAGATCGTCCGATGGCGGT > SRR3722120.864088/1‑151 (MQ=60)
TTGAAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACGCTATCAAAGATCGTCCGATGGCGGTGAATGGTCAGGTTGC > SRR3722120.185140/1‑151 (MQ=60)
AAGATCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACGCTATCAAAGATCGTCCGATGGCGGTGAATGGTCAGGTTGAGAT < SRR3722120.376095/151‑1 (MQ=60)
AAGACCCGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACGCTATCAAAGATCGTCCGATGGCGGTGAATGGTCAGGTTGAGAT < SRR3722120.851184/151‑1 (MQ=60)
|
GGTTTCTACGCCGCGCGGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCTGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACGCTATCAAAGATCGTCCGATGGCGGTGAATGGTCAGGTTGAGAT > NZ_CP009273/757793‑758068
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
