Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
5 3 4
6 3 4
7 3 4
8 3 4
5 13 17

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 22 97
Multiple Base Substitutions 0 0
Deletions 9 72
Insertions 3 34
Mobile Element Insertions 1 17
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 35 220

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 10 0 129.8 6430323 94.0% 6044503 100.0
A5 F24 I0 R1 107 0 541.0 16915304 98.9% 16729235 149.7
A5 F44 I0 R1 81 0 90.1 2817932 99.0% 2789752 149.8
A5 F59 I0 R1 613 0 91.1 3201758 95.3% 3051275 148.1
A5 F59 I1 R1 12 0 126.4 3994322 97.9% 3910441 149.9
A6 F24 I0 R1 132 0 382.8 12015400 98.9% 11883230 149.7
A6 F44 I0 R1 145 0 463.1 14472986 99.0% 14328256 149.9
A6 F58 I0 R1 99 0 133.7 4209358 98.1% 4129380 149.9
A6 F58 I1 R1 14 0 129.6 4117300 98.1% 4039071 149.9
A7 F24 I0 R1 100 0 529.4 16504576 99.0% 16339530 149.8
A7 F42 I0 R1 155 0 268.7 8414120 99.0% 8329978 149.9
A7 F56 I0 R1 356 0 121.4 3827240 97.9% 3746867 149.9
A7 F56 I1 R1 12 0 137.8 4394400 97.9% 4302117 149.9
A8 F23 I0 R1 165 0 165.4 5172476 99.1% 5125923 149.9
A8 F44 I0 R1 146 0 188.7 5884870 99.0% 5826021 149.9
A8 F59 I0 R1 391 0 140.5 4431994 97.9% 4338922 149.9
A8 F59 I1 R1 11 0 127.3 4060544 97.7% 3967151 149.9

Mutation Needle Plot

Mutation Targets

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