mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,774,215 | 0 | T | G | 57.1% | 7.5 / 11.7 | 14 | G343G (GGT→GGG) | lldD | quinone‑dependent L‑lactate dehydrogenase |
| * | NZ_CP009273 | 262,051 | 0 | T | G | 54.5% | 7.5 / 10.8 | 11 | T72P (ACC→CCC) | BW25113_RS25425 | hypothetical protein |
| * | NZ_CP009273 | 262,069 | 0 | T | G | 54.5% | 4.9 / 10.6 | 11 | T66P (ACC→CCC) | BW25113_RS25425 | hypothetical protein |
| * | NZ_CP009273 | 117,252 | 0 | T | G | 53.8% | 1.8 / 11.8 | 13 | T263P (ACC→CCC) | aroP | aromatic amino acid transporter AroP |
| * | NZ_CP009273 | 2,254,480 | 0 | A | C | 53.8% | 9.2 / 13.6 | 13 | V137G (GTG→GGG) | fruA | PTS fructose transporter subunit IIBC |
| * | NZ_CP009273 | 3,659,062 | 0 | C | A | 53.8% | 3.1 / 15.4 | 13 | A37S (GCG→TCG) | gadX | acid resistance transcriptional activator GadX |
| * | NZ_CP009273 | 1,613,555 | 0 | T | G | 40.0% | ‑2.6 / 10.5 | 10 | L60R (CTG→CGG) | marR | multiple antibiotic resistance transcriptional regulator MarR |