breseq  version 0.35.4  revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence position mutation annotation gene description
RA 49,765 C→T intergenic (+134/‑58) kefC → / → folA glutathione‑regulated potassium‑efflux system protein KefC/type 3 dihydrofolate reductase
RA 49,898 G→A A26T (GCC→ACC)  folA → type 3 dihydrofolate reductase
RA 49,912 G→T W30C (TGG→TGT)  folA → type 3 dihydrofolate reductase
MC JC 2,399,465 Δ7 bp coding (650‑656/939 nt) lrhA ← transcriptional regulator LrhA

Unassigned missing coverage evidence
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 17152 17282 131 2 [1] [1] 2 mokC/nhaA type I toxin‑antitoxin system toxin MokC/Na+/H+ antiporter NhaA
* * ÷ NZ_CP009273 41958 42052 95 2 [1] [1] 3 caiT/fixA L‑carnitine/gamma‑butyrobetaine antiporter/electron transfer flavoprotein FixA
* * ÷ NZ_CP009273 76307 76318 12 2 [0] [0] 2 leuC 3‑isopropylmalate dehydratase large subunit
* * ÷ NZ_CP009273 80506 80520 15 2 [1] [0] 2 leuL/leuO leu operon leader peptide/transcriptional regulator LeuO
* * ÷ NZ_CP009273 96839 96878 40 2 [1] [1] 2 murG undecaprenyldiphospho‑muramoylpentapeptide beta‑N‑acetylglucosaminyltransferase
* * ÷ NZ_CP009273 118082 118110 29 3 [1] [1] 2 aroP/pdhR aromatic amino acid transporter AroP/pyruvate dehydrogenase complex transcriptional repressor PdhR
* * ÷ NZ_CP009273 118273 118312 40 3 [1] [1] 2 aroP/pdhR aromatic amino acid transporter AroP/pyruvate dehydrogenase complex transcriptional repressor PdhR
* * ÷ NZ_CP009273 123002 123020 19 3 [0] [1] 3 aceF pyruvate dehydrogenase complex dihydrolipoyllysine‑residue acetyltransferase
* * ÷ NZ_CP009273 153335 153340 6 3 [1] [0] 2 yadN fimbrial protein
* * ÷ NZ_CP009273 153603 153625 23 2 [0] [1] 2 yadN/folK fimbrial protein/2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine diphosphokinase
* * ÷ NZ_CP009273 153696 153772 77 2 [1] [1] 3 [folK] [folK]
* * ÷ NZ_CP009273 181414 181424 11 4 [1] [0] 5 yaeI phosphodiesterase YaeI
* * ÷ NZ_CP009273 227421 227443 23 4 [1] [0] 3 yafC/yafD DNA‑binding transcriptional regulator YafC/endonuclease/exonuclease/phosphatase family protein
* * ÷ NZ_CP009273 233664 233757 94 2 [1] [1] 2 BW25113_RS01085/BW25113_RS01090 tRNA‑Asp/lipoprotein
* * ÷ NZ_CP009273 234981 235072 92 2 [1] [1] 2 BW25113_RS01095 hypothetical protein
* * ÷ NZ_CP009273 238070 238091 22 3 [0] [1] 2 fadE acyl‑CoA dehydrogenase FadE
* * ÷ NZ_CP009273 271637 271667 31 2 [1] [1] 2 mmuP S‑methylmethionine permease
* * ÷ NZ_CP009273 286061 286069 9 2 [0] [1] 2 argL putative translational regulatory protein ArgL
* * ÷ NZ_CP009273 290596 290637 42 2 [0] [1] 2 [ykgV] [ykgV]
* * ÷ NZ_CP009273 301201 301213 13 2 [1] [0] 2 ecpD fimbrial adhesin EcpD
* * ÷ NZ_CP009273 356978 357577 600 2 [1] [1] 2 [lacA] [lacA]
* * ÷ NZ_CP009273 380361 380476 116 3 [1] [1] 2 BW25113_RS01880/tauA PIG‑L family deacetylase/taurine ABC transporter substrate‑binding protein
* * ÷ NZ_CP009273 396613 396690 78 2 [1] [1] 2 [BW25113_RS25915] [BW25113_RS25915]
* * ÷ NZ_CP009273 428503 428577 75 3 [1] [1] 2 nrdR transcriptional regulator NrdR
* * ÷ NZ_CP009273 447439 447457 19 3 [1] [0] 2 cyoA/ampG cytochrome o ubiquinol oxidase subunit II/muropeptide MFS transporter AmpG
* * ÷ NZ_CP009273 508911 508940 30 3 [1] [1] 2 ybaT APC family permease
* * ÷ NZ_CP009273 509558 509568 11 2 [1] [0] 2 cueR Cu(I)‑responsive transcriptional regulator
* * ÷ NZ_CP009273 509918 509954 37 2 [0] [1] 2 ybbJ NfeD family protein
* * ÷ NZ_CP009273 518305 518364 60 2 [1] [1] 2 ybbP/rhsD ABC transporter permease/rhs element protein RhsD
* * ÷ NZ_CP009273 518455 518621 167 2 [1] [1] 2 ybbP/rhsD ABC transporter permease/rhs element protein RhsD
* * ÷ NZ_CP009273 524146 524156 11 2 [1] [0] 2 BW25113_RS24960 hypothetical protein
* * ÷ NZ_CP009273 541941 541974 34 4 [1] [0] 2 allD/fdrA ureidoglycolate dehydrogenase/acyl‑CoA synthetase FdrA
* * ÷ NZ_CP009273 564455 564477 23 2 [1] [1] 2 ybcK recombinase family protein
* * ÷ NZ_CP009273 565505 565541 37 2 [1] [1] 2 ybcK recombinase family protein
* * ÷ NZ_CP009273 572338 572405 68 2 [1] [0] 2 BW25113_RS02855/essD porin/phage lysis protein EssD
* * ÷ NZ_CP009273 574703 574713 11 2 [0] [1] 2 ybcV DUF1398 domain‑containing protein
* * ÷ NZ_CP009273 578784 578994 211 2 [1] [1] 2 BW25113_RS26085/appY tail fiber assembly protein/DNA‑binding transcriptional activator AppY
* * ÷ NZ_CP009273 579533 579596 64 2 [1] [1] 2 appY DNA‑binding transcriptional activator AppY
* * ÷ NZ_CP009273 579906 579914 9 2 [0] [0] 2 appY/ompT DNA‑binding transcriptional activator AppY/omptin family outer membrane protease OmpT
* * ÷ NZ_CP009273 580206 580237 32 5 [0] [1] 2 ompT omptin family outer membrane protease OmpT
* * ÷ NZ_CP009273 581069 581212 144 2 [1] [1] 2 [ompT] [ompT]
* * ÷ NZ_CP009273 602533 602638 106 2 [1] [1] 2 ybdK YbdK family carboxylate‑amine ligase
* * ÷ NZ_CP009273 613512 613587 76 2 [1] [0] 5 entF/wzz(fepE) enterobactin non‑ribosomal peptide synthetase EntF/LPS O‑antigen length regulator Wzz(fepE)
* * ÷ NZ_CP009273 613799 613837 39 2 [1] [1] 2 wzz(fepE) LPS O‑antigen length regulator Wzz(fepE)
* * ÷ NZ_CP009273 620268 620328 61 4 [1] [1] 2 fepB/entC Fe2+‑enterobactin ABC transporter substrate‑binding protein/isochorismate synthase EntC
* * ÷ NZ_CP009273 633197 633209 13 3 [1] [0] 2 ybdO/dsbG LysR family transcriptional regulator/thiol:disulfide interchange protein DsbG
* * ÷ NZ_CP009273 647510 647664 155 2 [1] [1] 2 citC/dpiB [citrate (pro‑3S)‑lyase] ligase/sensor histidine kinase DpiB
* * ÷ NZ_CP009273 653955 653971 17 2 [0] [1] 2 BW25113_RS03250 deaminated glutathione amidase
* * ÷ NZ_CP009273 655387 655396 10 2 [0] [0] 2 lipA lipoyl synthase
* * ÷ NZ_CP009273 656224 656234 11 3 [1] [0] 2 ybeF YbeF family transcriptional regulator
* * ÷ NZ_CP009273 669376 669399 24 2 [1] [1] 3 leuS leucine‑‑tRNA ligase
* * ÷ NZ_CP009273 674218 674282 65 3 [0] [1] 2 djlB J domain‑containing protein
* * ÷ NZ_CP009273 674806 674912 107 2 [1] [1] 2 [ybeT] [ybeT]
* * ÷ NZ_CP009273 677408 677520 113 2 [1] [1] 3 hscC molecular chaperone HscC
* * ÷ NZ_CP009273 681364 681410 47 2 [1] [1] 2 [gltK]–[gltJ] [gltK],[gltJ]
* * ÷ NZ_CP009273 701001 701021 21 2 [1] [1] 2 nagE PTS N‑acetyl glucosamine transporter subunit IIABC
* * ÷ NZ_CP009273 703510 703559 50 3 [1] [1] 2 glnS/chiP glutamine‑‑tRNA ligase/chitoporin
* * ÷ NZ_CP009273 712657 712668 12 2 [0] [0] 2 potE putrescine‑ornithine antiporter
* * ÷ NZ_CP009273 716342 716533 192 3 [1] [1] 3 [kdpE] [kdpE]
* * ÷ NZ_CP009273 719012 719097 86 3 [1] [1] 2 kdpD two‑component system sensor histidine kinase KdpD
* * ÷ NZ_CP009273 721029 721049 21 2 [1] [1] 2 kdpB potassium‑transporting ATPase subunit KdpB
* * ÷ NZ_CP009273 722508 722565 58 2 [1] [1] 2 [kdpA] [kdpA]
* * ÷ NZ_CP009273 724391 724527 137 2 [1] [1] 2 kdpF/ybfA K(+)‑transporting ATPase subunit F/YbfA family protein
* * ÷ NZ_CP009273 724884 724992 109 3 [0] [1] 2 ybfA/rhsC YbfA family protein/rhs element protein RhsC
* * ÷ NZ_CP009273 731698 731832 135 2 [1] [1] 3 BW25113_RS03640/ybfQ hypothetical protein/ISAs1 family transposase
* * ÷ NZ_CP009273 732182 732284 103 2 [0] [1] 3 [BW25113_RS03650] [BW25113_RS03650]
* * ÷ NZ_CP009273 732409 732428 20 2 [1] [1] 2 BW25113_RS03650 ISAs1 family transposase
* * ÷ NZ_CP009273 736519 736539 21 2 [1] [0] 4 [dtpD] [dtpD]
* * ÷ NZ_CP009273 745003 745008 6 2 [0] [0] 2 ybgP molecular chaperone
* * ÷ NZ_CP009273 747442 747516 75 2 [1] [1] 2 ybgQ fimbrial biogenesis outer membrane usher protein
* * ÷ NZ_CP009273 748082 748097 16 2 [0] [1] 2 ybgD fimbrial protein
* * ÷ NZ_CP009273 748292 748410 119 2 [0] [0] 2 ybgD/gltA fimbrial protein/citrate synthase
* * ÷ NZ_CP009273 748475 748579 105 2 [0] [1] 2 ybgD/gltA fimbrial protein/citrate synthase
* * ÷ NZ_CP009273 748872 748876 5 2 [0] [1] 3 gltA citrate synthase
* * ÷ NZ_CP009273 761312 761402 91 2 [1] [1] 4 [mngR] [mngR]
* * ÷ NZ_CP009273 763990 764000 11 3 [0] [0] 2 mngB mannosylglycerate hydrolase
* * ÷ NZ_CP009273 766214 766363 150 2 [1] [1] 3 mngB/cydA mannosylglycerate hydrolase/cytochrome ubiquinol oxidase subunit I
* * ÷ NZ_CP009273 766450 766583 134 2 [1] [1] 2 mngB/cydA mannosylglycerate hydrolase/cytochrome ubiquinol oxidase subunit I
* * ÷ NZ_CP009273 772265 772292 28 2 [0] [1] 2 tolA cell envelope integrity protein TolA
* * ÷ NZ_CP009273 772678 772706 29 2 [1] [0] 2 tolA cell envelope integrity protein TolA
* * ÷ NZ_CP009273 774459 774527 69 2 [1] [1] 2 [tolB]–[pal] [tolB],[pal]
* * ÷ NZ_CP009273 791121 791148 28 2 [1] [0] 2 modA molybdate ABC transporter substrate‑binding protein
* * ÷ NZ_CP009273 794803 794872 70 2 [1] [0] 2 pgl 6‑phosphogluconolactonase
* * ÷ NZ_CP009273 796393 796427 35 2 [1] [1] 2 ybhH 4‑oxalomesaconate tautomerase
* * ÷ NZ_CP009273 806178 806227 50 2 [1] [0] 2 bioF 8‑amino‑7‑oxononanoate synthase
* * ÷ NZ_CP009273 808476 808501 26 2 [0] [0] 2 bioD/uvrB dethiobiotin synthase/excinuclease ABC subunit UvrB
* * ÷ NZ_CP009273 808566 808643 78 2 [0] [0] 2 bioD/uvrB dethiobiotin synthase/excinuclease ABC subunit UvrB
* * ÷ NZ_CP009273 816159 816267 109 3 [1] [1] 2 [ybhM] [ybhM]
* * ÷ NZ_CP009273 827644 827691 48 2 [1] [1] 2 rhlE ATP‑dependent RNA helicase RhlE
* * ÷ NZ_CP009273 836316 836384 69 2 [1] [0] 2 fiu catecholate siderophore receptor Fiu
* * ÷ NZ_CP009273 837646 837689 44 2 [1] [1] 3 mcbA/rlmF DUF1471 family periplasmic protein McbA/23S rRNA (adenine(1618)‑N(6))‑methyltransferase RlmF
* * ÷ NZ_CP009273 845010 845133 124 4 [1] [1] 2 rhtA threonine/homoserine exporter RhtA
* * ÷ NZ_CP009273 856682 856711 30 2 [1] [1] 2 ybiW glycyl radical protein
* * ÷ NZ_CP009273 860470 860488 19 2 [1] [1] 3 moeB molybdopterin‑synthase adenylyltransferase MoeB
* * ÷ NZ_CP009273 861343 861361 19 2 [1] [1] 3 moeA molybdopterin molybdotransferase MoeA
* * ÷ NZ_CP009273 862759 862788 30 2 [1] [1] 2 iaaA beta‑aspartyl‑peptidase
* * ÷ NZ_CP009273 869168 869264 97 2 [1] [1] 2 pdeI EAL domain‑containing protein
* * ÷ NZ_CP009273 884962 885050 89 2 [1] [1] 2 ybjL aspartate:alanine antiporter
* * ÷ NZ_CP009273 896095 896171 77 3 [1] [1] 2 artJ/artM ABC transporter substrate‑binding protein ArtJ/arginine ABC transporter permease ArtM
* * ÷ NZ_CP009273 897054 897101 48 2 [1] [1] 2 artQ arginine ABC transporter permease ArtQ
* * ÷ NZ_CP009273 907700 907793 94 2 [1] [1] 3 hcp hydroxylamine reductase
* * ÷ NZ_CP009273 909264 909287 24 2 [1] [0] 2 [hcp] [hcp]
* * ÷ NZ_CP009273 914866 914868 3 2 [0] [1] 3 macA macrolide transporter subunit MacA
* * ÷ NZ_CP009273 916991 917011 21 2 [0] [0] 2 macB macrolide ABC transporter ATP‑binding protein/permease MacB
* * ÷ NZ_CP009273 919556 919578 23 2 [0] [1] 2 clpA ATP‑dependent Clp protease ATP‑binding subunit ClpA
* * ÷ NZ_CP009273 930991 931035 45 2 [1] [1] 2 ftsK DNA translocase FtsK
* * ÷ NZ_CP009273 932894 933052 159 2 [1] [1] 2 lolA outer membrane lipoprotein chaperone LolA
* * ÷ NZ_CP009273 938277 938346 70 2 [1] [1] 2 dmsA dimethylsulfoxide reductase subunit A
* * ÷ NZ_CP009273 946231 946240 10 2 [0] [0] 2 pflA pyruvate formate lyase 1‑activating protein
* * ÷ NZ_CP009273 950751 950777 27 2 [1] [1] 2 ycaO 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
* * ÷ NZ_CP009273 951095 951100 6 3 [1] [1] 2 ycaO 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
* * ÷ NZ_CP009273 958849 958886 38 3 [1] [0] 2 rpsA 30S ribosomal protein S1
* * ÷ NZ_CP009273 970150 970165 16 2 [1] [1] 2 mukF chromosome partition protein MukF
* * ÷ NZ_CP009273 975506 975547 42 2 [1] [1] 2 mukB chromosome partition protein MukB
* * ÷ NZ_CP009273 982724 982771 48 2 [0] [0] 2 ompF/asnS porin OmpF/asparagine‑‑tRNA ligase
* * ÷ NZ_CP009273 982898 982977 80 2 [1] [1] 2 ompF/asnS porin OmpF/asparagine‑‑tRNA ligase
* * ÷ NZ_CP009273 988256 988285 30 2 [1] [0] 2 pepN aminopeptidase N
* * ÷ NZ_CP009273 991346 991393 48 2 [1] [1] 2 ssuD FMNH2‑dependent alkanesulfonate monooxygenase
* * ÷ NZ_CP009273 993109 993178 70 2 [1] [1] 2 ssuE/elfA NADPH‑dependent FMN reductase/fimbrial protein
* * ÷ NZ_CP009273 993855 993907 53 2 [0] [1] 2 [elfA] [elfA]
* * ÷ NZ_CP009273 1001836 1001920 85 2 [1] [1] 3 zapC cell division protein ZapC
* * ÷ NZ_CP009273 1015846 1015880 35 2 [1] [1] 2 [sulA] [sulA]
* * ÷ NZ_CP009273 1023298 1023300 3 2 [0] [1] 2 yccT/yccU DUF2057 family protein/CoA‑binding protein
* * ÷ NZ_CP009273 1023577 1023646 70 3 [1] [1] 2 yccU CoA‑binding protein
* * ÷ NZ_CP009273 1025024 1025086 63 2 [1] [1] 3 rlmI 23S rRNA (cytosine(1962)‑C(5))‑methyltransferase RlmI
* * ÷ NZ_CP009273 1025701 1025773 73 2 [1] [1] 2 yccX acylphosphatase
* * ÷ NZ_CP009273 1029664 1029691 28 2 [1] [0] 2 hyaB Ni/Fe‑hydrogenase large subunit
* * ÷ NZ_CP009273 1032507 1032590 84 2 [1] [1] 2 hyaF hydrogenase expression/formation protein
* * ÷ NZ_CP009273 1049355 1049414 60 2 [1] [1] 2 torS TMAO reductase system sensor histidine kinase/response regulator TorS
* * ÷ NZ_CP009273 1055755 1055820 66 2 [0] [1] 2 torA trimethylamine‑N‑oxide reductase TorA
* * ÷ NZ_CP009273 1059379 1059408 30 2 [0] [0] 2 cbpA/yccE curved DNA‑binding protein/YccE family protein
* * ÷ NZ_CP009273 1060292 1060338 47 2 [1] [0] 2 yccE YccE family protein
* * ÷ NZ_CP009273 1060488 1060509 22 2 [1] [1] 2 yccE YccE family protein
* * ÷ NZ_CP009273 1066625 1066647 23 2 [1] [0] 2 rutD pyrimidine utilization protein D
* * ÷ NZ_CP009273 1068503 1068538 36 3 [1] [1] 2 rutA pyrimidine utilization protein A
* * ÷ NZ_CP009273 1070043 1070046 4 2 [0] [1] 2 rutR HTH‑type transcriptional regulator RutR
* * ÷ NZ_CP009273 1080331 1080353 23 3 [1] [0] 2 efeB/phoH iron uptake transporter deferrochelatase/peroxidase subunit/phosphate starvation‑inducible protein PhoH
* * ÷ NZ_CP009273 1088113 1088154 42 2 [0] [0] 2 pgaA/dgcT poly‑beta‑1,6 N‑acetyl‑D‑glucosamine export porin PgaA/GGDEF domain‑containing protein
* * ÷ NZ_CP009273 1089136 1089203 68 3 [1] [0] 2 dgcT GGDEF domain‑containing protein
* * ÷ NZ_CP009273 1097099 1097116 18 2 [0] [1] 3 csgG curli production assembly/transport protein CsgG
* * ÷ NZ_CP009273 1098786 1098983 198 2 [1] [1] 2 csgD/csgB biofilm master transcriptional regulator CsgD/curli minor subunit CsgB
* * ÷ NZ_CP009273 1104586 1104650 65 2 [1] [0] 2 mdoC/mdoG glucans biosynthesis protein MdoC/glucans biosynthesis protein MdoG
* * ÷ NZ_CP009273 1105242 1105268 27 3 [1] [0] 2 mdoG glucans biosynthesis protein MdoG
* * ÷ NZ_CP009273 1114843 1114854 12 2 [0] [0] 2 BW25113_RS05515 YceO family protein
* * ÷ NZ_CP009273 1116551 1116611 61 2 [1] [1] 2 bssS/dinI biofilm formation regulator BssS/DNA damage‑inducible protein I
* * ÷ NZ_CP009273 1116652 1116702 51 2 [1] [0] 2 [dinI] [dinI]
* * ÷ NZ_CP009273 1128504 1128545 42 2 [1] [1] 2 flgE flagellar hook protein FlgE
* * ÷ NZ_CP009273 1129462 1129479 18 2 [1] [1] 3 flgF flagellar basal‑body rod protein FlgF
* * ÷ NZ_CP009273 1134629 1134639 11 2 [1] [0] 2 flgK flagellar hook‑associated protein FlgK
* * ÷ NZ_CP009273 1136560 1136574 15 2 [1] [0] 2 flgL/rne flagellar hook‑associated protein FlgL/ribonuclease E
* * ÷ NZ_CP009273 1137400 1137486 87 2 [1] [1] 2 rne ribonuclease E
* * ÷ NZ_CP009273 1138239 1138286 48 2 [1] [0] 2 rne ribonuclease E
* * ÷ NZ_CP009273 1148568 1148576 9 3 [1] [0] 2 fabF beta‑ketoacyl‑ACP synthase II
* * ÷ NZ_CP009273 1148763 1148781 19 2 [1] [0] 3 pabC aminodeoxychorismate lyase
* * ÷ NZ_CP009273 1153353 1153390 38 2 [1] [1] 2 ptsG PTS glucose transporter subunit IIBC
* * ÷ NZ_CP009273 1155656 1155660 5 3 [1] [1] 2 fhuE ferric‑rhodotorulic acid/ferric‑coprogen receptor FhuE
* * ÷ NZ_CP009273 1157915 1157979 65 2 [1] [1] 2 ycfL YcfL family protein
* * ÷ NZ_CP009273 1164354 1164468 115 2 [1] [0] 3 comR/bhsA TetR family copper‑responsive transcriptional repressor ComR/multiple stress resistance protein BhsA
* * ÷ NZ_CP009273 1165625 1165755 131 2 [0] [0] 2 ldtC L,D‑transpeptidase LdtC
* * ÷ NZ_CP009273 1169647 1169647 1 2 [0] [0] 3 ycfT acyltransferase family protein
* * ÷ NZ_CP009273 1172138 1172153 16 2 [0] [0] 2 lolD lipoprotein‑releasing ABC transporter ATP‑binding protein LolD
* * ÷ NZ_CP009273 1172277 1172353 77 3 [1] [1] 2 lolD lipoprotein‑releasing ABC transporter ATP‑binding protein LolD
* * ÷ NZ_CP009273 1176879 1176987 109 4 [0] [1] 2 ymfA DUF3592 domain‑containing protein
* * ÷ NZ_CP009273 1178610 1178635 26 2 [1] [1] 2 potC spermidine/putrescine ABC transporter permease PotC
* * ÷ NZ_CP009273 1189840 1189866 27 3 [1] [1] 3 rluE 23S rRNA pseudouridine(2457) synthase RluE
* * ÷ NZ_CP009273 1191830 1191860 31 3 [1] [1] 2 icd/ymfD NADP‑dependent isocitrate dehydrogenase/class I SAM‑dependent methyltransferase
* * ÷ NZ_CP009273 1192692 1192714 23 3 [0] [0] 2 ymfD class I SAM‑dependent methyltransferase
* * ÷ NZ_CP009273 1193092 1193156 65 2 [1] [1] 2 BW25113_RS05920 hypothetical protein
* * ÷ NZ_CP009273 1197211 1197248 38 3 [0] [0] 2 BW25113_RS23630 hypothetical protein
* * ÷ NZ_CP009273 1203608 1203656 49 2 [1] [1] 2 tfaP tail assembly chaperone
* * ÷ NZ_CP009273 1204402 1204426 25 2 [0] [1] 2 tfaE tail fiber assembly protein
* * ÷ NZ_CP009273 1204735 1204747 13 2 [0] [1] 2 BW25113_RS06005 phage tail protein
* * ÷ NZ_CP009273 1206778 1206814 37 2 [0] [1] 2 mcrA/BW25113_RS23640 5‑methylcytosine‑specific endonuclease McrA/isocitrate/isopropylmalate family dehydrogenase
* * ÷ NZ_CP009273 1207107 1207211 105 2 [1] [1] 2 [iraM] [iraM]
* * ÷ NZ_CP009273 1207536 1207655 120 2 [0] [1] 2 iraM/BW25113_RS25985 anti‑adapter protein IraM/protein YmgK
* * ÷ NZ_CP009273 1210800 1210810 11 2 [0] [1] 2 bluF blue light‑responsive regulator BluF
* * ÷ NZ_CP009273 1211133 1211178 46 4 [0] [1] 3 bluF/ycgZ blue light‑responsive regulator BluF/regulatory protein YcgZ
* * ÷ NZ_CP009273 1212105 1212168 64 2 [0] [1] 2 ariR/BW25113_RS06060 biofilm/acid‑resistance regulator AriR/hypothetical protein
* * ÷ NZ_CP009273 1212285 1212313 29 2 [1] [0] 2 BW25113_RS06060 hypothetical protein
* * ÷ NZ_CP009273 1214868 1214940 73 2 [1] [1] 2 BW25113_RS06070/BW25113_RS25990 hypothetical protein/autotransporter outer membrane beta‑barrel domain‑containing protein
* * ÷ NZ_CP009273 1215031 1215088 58 2 [1] [0] 2 BW25113_RS06070/BW25113_RS25990 hypothetical protein/autotransporter outer membrane beta‑barrel domain‑containing protein
* * ÷ NZ_CP009273 1218603 1218678 76 2 [1] [1] 2 [BW25113_RS06100] [BW25113_RS06100]
* * ÷ NZ_CP009273 1221898 1221933 36 2 [0] [1] 2 minC/ycgJ septum site‑determining protein MinC/YcgJ family protein
* * ÷ NZ_CP009273 1224348 1224354 7 2 [1] [1] 2 ycgN YcgN family cysteine cluster protein
* * ÷ NZ_CP009273 1225865 1226021 157 3 [1] [1] 2 hlyE/umuD hemolysin HlyE/translesion error‑prone DNA polymerase V autoproteolytic subunit
* * ÷ NZ_CP009273 1226205 1226227 23 2 [0] [1] 3 [umuD] [umuD]
* * ÷ NZ_CP009273 1227290 1227299 10 2 [1] [0] 2 umuC DNA polymerase V catalytic protein
* * ÷ NZ_CP009273 1229723 1229761 39 2 [1] [1] 2 nhaB Na(+)/H(+) antiporter NhaB
* * ÷ NZ_CP009273 1240884 1240903 20 2 [1] [1] 2 BW25113_RS06225 hypothetical protein
* * ÷ NZ_CP009273 1243712 1243764 53 3 [1] [1] 2 dhaM dihydroxyacetone kinase phosphoryl donor subunit DhaM
* * ÷ NZ_CP009273 1251635 1251743 109 2 [1] [1] 2 ycgV/ychF autotransporter outer membrane beta‑barrel domain‑containing protein/redox‑regulated ATPase YchF
* * ÷ NZ_CP009273 1252132 1252204 73 2 [1] [1] 2 [ychF] [ychF]
* * ÷ NZ_CP009273 1252443 1252477 35 2 [1] [0] 2 ychF redox‑regulated ATPase YchF
* * ÷ NZ_CP009273 1263157 1263211 55 2 [1] [1] 2 sirB1 invasion regulator SirB1
* * ÷ NZ_CP009273 1269082 1269103 22 2 [1] [1] 2 ychN/ychO DsrE/F sulfur relay family protein YchN/inverse autotransporter invasin YchO
* * ÷ NZ_CP009273 1269190 1269255 66 2 [1] [1] 2 [ychO] [ychO]
* * ÷ NZ_CP009273 1274906 1274977 72 2 [1] [1] 2 narK/narG nitrate transporter NarK/nitrate reductase subunit alpha
* * ÷ NZ_CP009273 1281288 1281308 21 2 [1] [0] 2 [narJ]–[narI] [narJ],[narI]
* * ÷ NZ_CP009273 1284982 1285022 41 3 [1] [1] 2 rssA patatin‑like phospholipase RssA
* * ÷ NZ_CP009273 1286030 1286106 77 2 [1] [1] 2 rssB two‑component system response regulator RssB
* * ÷ NZ_CP009273 1289270 1289290 21 2 [0] [1] 2 tdk thymidine kinase
* * ÷ NZ_CP009273 1294800 1294839 40 2 [1] [0] 2 ychE/BW25113_RS25865 NAAT family transporter YchE/hypothetical protein
* * ÷ NZ_CP009273 1297380 1297420 41 2 [1] [1] 4 oppB oligopeptide ABC transporter permease OppB
* * ÷ NZ_CP009273 1301501 1301547 47 2 [1] [1] 2 cls cardiolipin synthase
* * ÷ NZ_CP009273 1303392 1303637 246 2 [1] [1] 2 kch voltage‑gated potassium channel protein
* * ÷ NZ_CP009273 1305496 1305550 55 2 [1] [1] 2 tonB TonB system transport protein TonB
* * ÷ NZ_CP009273 1306046 1306114 69 2 [1] [1] 2 [tonB]–[yciA] [tonB],[yciA]
* * ÷ NZ_CP009273 1306228 1306238 11 2 [0] [1] 2 yciA acyl‑CoA thioester hydrolase YciA
* * ÷ NZ_CP009273 1310400 1310534 135 3 [0] [1] 2 yciG/trpA general stress protein/tryptophan synthase subunit alpha
* * ÷ NZ_CP009273 1312429 1312529 101 2 [1] [1] 2 trpB tryptophan synthase subunit beta
* * ÷ NZ_CP009273 1313006 1313019 14 2 [1] [1] 2 trpCF bifunctional indole‑3‑glycerol‑phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF
* * ÷ NZ_CP009273 1313689 1313713 25 2 [1] [1] 2 trpCF bifunctional indole‑3‑glycerol‑phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF
* * ÷ NZ_CP009273 1313901 1313922 22 2 [1] [1] 2 trpCF bifunctional indole‑3‑glycerol‑phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF
* * ÷ NZ_CP009273 1314921 1314976 56 2 [0] [1] 2 trpD bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD
* * ÷ NZ_CP009273 1315093 1315144 52 2 [1] [1] 3 trpD bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD
* * ÷ NZ_CP009273 1315453 1315497 45 2 [1] [1] 2 trpD bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD
* * ÷ NZ_CP009273 1316188 1316278 91 2 [1] [1] 2 trpE anthranilate synthase component I
* * ÷ NZ_CP009273 1319514 1319560 47 2 [0] [1] 2 yciQ DUF2207 domain‑containing protein
* * ÷ NZ_CP009273 1319980 1319984 5 2 [1] [0] 2 yciQ DUF2207 domain‑containing protein
* * ÷ NZ_CP009273 1320647 1320667 21 2 [1] [1] 2 yciQ DUF2207 domain‑containing protein
* * ÷ NZ_CP009273 1320790 1320980 191 2 [1] [1] 2 [yciQ] [yciQ]
* * ÷ NZ_CP009273 1326398 1326459 62 2 [1] [1] 2 topA type I DNA topoisomerase
* * ÷ NZ_CP009273 1327190 1327232 43 2 [1] [1] 3 topA type I DNA topoisomerase
* * ÷ NZ_CP009273 1327640 1327701 62 2 [1] [0] 2 topA type I DNA topoisomerase
* * ÷ NZ_CP009273 1327993 1327997 5 2 [1] [0] 2 topA/cysB type I DNA topoisomerase/HTH‑type transcriptional regulator CysB
* * ÷ NZ_CP009273 1329811 1329864 54 2 [1] [1] 4 [BW25113_RS25560] [BW25113_RS25560]
* * ÷ NZ_CP009273 1331708 1331817 110 2 [1] [1] 2 acnA aconitate hydratase AcnA
* * ÷ NZ_CP009273 1334711 1334772 62 2 [1] [1] 2 lapA lipopolysaccharide assembly protein LapA
* * ÷ NZ_CP009273 1335278 1335333 56 2 [1] [1] 2 lapB lipopolysaccharide assembly protein LapB
* * ÷ NZ_CP009273 1338624 1338729 106 3 [1] [1] 3 [BW25113_RS06720] [BW25113_RS06720]
* * ÷ NZ_CP009273 1338996 1339019 24 2 [1] [1] 2 ymiD protein YmiD
* * ÷ NZ_CP009273 1341037 1341116 80 2 [1] [0] 2 [BW25113_RS25050] [BW25113_RS25050]
* * ÷ NZ_CP009273 1350392 1350404 13 3 [1] [1] 2 sapA peptide ABC transporter substrate‑binding protein SapA
* * ÷ NZ_CP009273 1350484 1350620 137 2 [1] [1] 2 sapA peptide ABC transporter substrate‑binding protein SapA
* * ÷ NZ_CP009273 1351268 1351277 10 2 [0] [1] 2 sapA peptide ABC transporter substrate‑binding protein SapA
* * ÷ NZ_CP009273 1351945 1352005 61 2 [1] [0] 3 ymjA/puuP YmjA family protein/putrescine/proton symporter PuuP
* * ÷ NZ_CP009273 1352645 1352703 59 2 [1] [1] 3 puuP putrescine/proton symporter PuuP
* * ÷ NZ_CP009273 1353487 1353542 56 2 [1] [1] 2 BW25113_RS25565 protein YmjE
* * ÷ NZ_CP009273 1359171 1359206 36 5 [1] [1] 2 puuB gamma‑glutamylputrescine oxidase
* * ÷ NZ_CP009273 1360793 1360805 13 2 [0] [1] 2 puuE 4‑aminobutyrate transaminase
* * ÷ NZ_CP009273 1362207 1362279 73 2 [1] [1] 2 pspF/pspA phage shock protein operon transcriptional activator/phage shock protein PspA
* * ÷ NZ_CP009273 1366297 1366304 8 3 [1] [0] 2 ycjN ABC transporter substrate‑binding protein
* * ÷ NZ_CP009273 1373025 1373104 80 3 [1] [1] 2 ycjT kojibiose phosphorylase
* * ÷ NZ_CP009273 1375443 1375525 83 3 [1] [1] 2 BW25113_RS06905 ABC transporter ATP‑binding protein
* * ÷ NZ_CP009273 1379689 1379713 25 5 [1] [1] 2 ycjX YcjX family protein
* * ÷ NZ_CP009273 1398824 1398836 13 2 [0] [1] 2 abgA/abgR p‑aminobenzoyl‑glutamate hydrolase subunit AbgA/LysR family transcriptional regulator
* * ÷ NZ_CP009273 1402320 1402351 32 2 [0] [1] 2 zntB zinc transporter ZntB
* * ÷ NZ_CP009273 1407113 1407237 125 3 [1] [1] 2 intR site‑specific integrase
* * ÷ NZ_CP009273 1407764 1407775 12 2 [1] [1] 2 xisR/rcbA excisionase XisR/double‑strand break reduction protein RcbA
* * ÷ NZ_CP009273 1417976 1418045 70 3 [0] [0] 2 [trkG] [trkG]
* * ÷ NZ_CP009273 1418213 1418281 69 3 [1] [0] 2 trkG Trk system potassium transporter TrkG
* * ÷ NZ_CP009273 1420194 1420241 48 3 [1] [1] 2 [BW25113_RS07160] [BW25113_RS07160]
* * ÷ NZ_CP009273 1424164 1424224 61 2 [1] [0] 2 stfR prophage tail fiber N‑terminal domain‑containing protein
* * ÷ NZ_CP009273 1429151 1429183 33 2 [1] [1] 2 BW25113_RS25575/uspF hypothetical protein/universal stress protein UspF
* * ÷ NZ_CP009273 1430914 1430934 21 4 [1] [1] 2 ompN porin OmpN
* * ÷ NZ_CP009273 1431699 1431745 47 3 [1] [1] 3 nifJ pyruvate:ferredoxin (flavodoxin) oxidoreductase
* * ÷ NZ_CP009273 1432372 1432375 4 2 [0] [1] 2 nifJ pyruvate:ferredoxin (flavodoxin) oxidoreductase
* * ÷ NZ_CP009273 1452416 1452440 25 2 [1] [1] 3 paaF 2,3‑dehydroadipyl‑CoA hydratase
* * ÷ NZ_CP009273 1459503 1459554 52 2 [1] [1] 2 BW25113_RS25580/BW25113_RS07350 hypothetical protein/autotransporter domain‑containing protein
* * ÷ NZ_CP009273 1481352 1481365 14 2 [1] [1] 2 hrpA/ydcF ATP‑dependent RNA helicase HrpA/YdcF family protein
* * ÷ NZ_CP009273 1489393 1489427 35 2 [1] [1] 2 ydcI/ydcJ LysR substrate‑binding domain‑containing protein/VOC family protein
* * ÷ NZ_CP009273 1496460 1496471 12 3 [1] [1] 2 tehB/ydcL tellurite resistance methyltransferase TehB/DUF3313 domain‑containing protein
* * ÷ NZ_CP009273 1521086 1521139 54 2 [1] [1] 2 [yncG] [yncG]
* * ÷ NZ_CP009273 1524374 1524470 97 2 [1] [0] 2 [BW25113_RS26145] [BW25113_RS26145]
* * ÷ NZ_CP009273 1537555 1537576 22 2 [1] [1] 2 narU nitrate/nitrite transporter NarU
* * ÷ NZ_CP009273 1539072 1539192 121 2 [1] [0] 2 BW25113_RS07710 leucine‑rich repeat domain‑containing protein
* * ÷ NZ_CP009273 1540207 1540506 300 3 [1] [1] 2 [yddL] [yddL]
* * ÷ NZ_CP009273 1573636 1573679 44 2 [1] [1] 2 yddA/BW25113_RS25610 ABC transporter ATP‑binding protein/permease/protein YneP
* * ÷ NZ_CP009273 1574939 1574947 9 2 [1] [1] 3 ydeM anaerobic sulfatase maturase
* * ÷ NZ_CP009273 1576961 1576982 22 2 [1] [1] 2 ydeN/ydeO sulfatase/acid stress response transcriptional regulator YdeO
* * ÷ NZ_CP009273 1577951 1577997 47 4 [1] [1] 2 ydeO/safA acid stress response transcriptional regulator YdeO/two‑component system connector SafA
* * ÷ NZ_CP009273 1580902 1580949 48 2 [1] [0] 2 ydeP/ydeQ acid resistance putative oxidoreductase YdeP/fimbrial protein
* * ÷ NZ_CP009273 1632452 1632462 11 3 [1] [0] 5 BW25113_RS25620 hypothetical protein
* * ÷ NZ_CP009273 1632943 1632982 40 2 [1] [1] 2 cspI/rzpQ cold shock protein CspI/DUF2514 domain‑containing protein
* * ÷ NZ_CP009273 1680705 1680719 15 2 [1] [1] 2 fumC class II fumarate hydratase
* * ÷ NZ_CP009273 1696649 1696654 6 2 [0] [0] 2 add adenosine deaminase
* * ÷ NZ_CP009273 1731072 1731125 54 2 [1] [1] 2 ydhP MFS transporter
* * ÷ NZ_CP009273 1733908 1733915 8 2 [1] [0] 2 punR DNA‑binding transcriptional activator PunR
* * ÷ NZ_CP009273 1764813 1764858 46 2 [1] [1] 2 rprA/ydiL antisense sRNA RprA/YdiL family protein
* * ÷ NZ_CP009273 1782086 1782111 26 2 [1] [0] 2 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR
* * ÷ NZ_CP009273 1784994 1785004 11 4 [0] [1] 3 selO protein adenylyltransferase SelO
* * ÷ NZ_CP009273 1800452 1800465 14 2 [1] [0] 2 ydiY/pfkB YdiY family protein/6‑phosphofructokinase II
* * ÷ NZ_CP009273 1807478 1807562 85 2 [1] [1] 2 BW25113_RS09050/cedA hypothetical protein/cell division activator CedA
* * ÷ NZ_CP009273 1818573 1818620 48 2 [1] [1] 2 cho excinuclease Cho
* * ÷ NZ_CP009273 1820208 1820285 78 3 [1] [1] 2 [astE] [astE]
* * ÷ NZ_CP009273 1864791 1864891 101 3 [1] [1] 3 cdgI GGDEF domain‑containing protein
* * ÷ NZ_CP009273 1896102 1896124 23 2 [1] [1] 2 yoaE/manX CNNM family cation transport protein YoaE/PTS mannose transporter subunit IIAB
* * ÷ NZ_CP009273 1902220 1902265 46 2 [1] [0] 2 yobF/yebO DUF2627 domain‑containing protein/YebO family protein
* * ÷ NZ_CP009273 1902351 1902401 51 2 [0] [1] 2 yobF/yebO DUF2627 domain‑containing protein/YebO family protein
* * ÷ NZ_CP009273 1940368 1940435 68 3 [1] [1] 2 [yobI] [yobI]
* * ÷ NZ_CP009273 1972982 1973033 52 2 [1] [1] 3 flhD/uspC flagellar transcriptional regulator FlhD/universal stress protein UspC
* * ÷ NZ_CP009273 1980176 1980236 61 2 [1] [1] 2 araF/ftnB arabinose ABC transporter substrate‑binding protein AraF/non‑heme ferritin‑like protein
* * ÷ NZ_CP009273 1982088 1982181 94 2 [1] [1] 3 yecR/ftnA YecR‑like lipofamily protein/non‑heme ferritin
* * ÷ NZ_CP009273 1989687 1989816 130 2 [1] [1] 2 sdiA transcriptional regulator SdiA
* * ÷ NZ_CP009273 2004827 2004889 63 2 [1] [1] 4 BW25113_RS10120 DUF5503 domain‑containing protein
* * ÷ NZ_CP009273 2005447 2005482 36 2 [1] [0] 2 BW25113_RS10120 DUF5503 domain‑containing protein
* * ÷ NZ_CP009273 2008691 2008828 138 2 [1] [1] 2 fliG flagellar motor switch protein FliG
* * ÷ NZ_CP009273 2020909 2020917 9 2 [0] [1] 2 yedQ cellulose biosynthesis regulator diguanylate cyclase DgcQ
* * ÷ NZ_CP009273 2025682 2025692 11 3 [0] [0] 2 dcm DNA‑cytosine methyltransferase
* * ÷ NZ_CP009273 2027083 2027142 60 2 [1] [1] 4 drpB/ompC cell division protein DrpB/porin OmpC
* * ÷ NZ_CP009273 2027350 2027453 104 2 [1] [1] 3 drpB/ompC cell division protein DrpB/porin OmpC
* * ÷ NZ_CP009273 2050132 2050287 156 3 [0] [1] 2 amn/yeeN AMP nucleosidase/YebC/PmpR family DNA‑binding transcriptional regulator
* * ÷ NZ_CP009273 2051075 2051226 152 2 [0] [1] 2 yeeN/BW25113_RS10360 YebC/PmpR family DNA‑binding transcriptional regulator/tRNA‑Asn
* * ÷ NZ_CP009273 2051424 2051487 64 5 [0] [1] 2 yeeN/BW25113_RS10360 YebC/PmpR family DNA‑binding transcriptional regulator/tRNA‑Asn
* * ÷ NZ_CP009273 2055704 2055711 8 2 [1] [1] 2 nac/BW25113_RS10385 nitrogen assimilation transcriptional regulator NAC/tRNA‑Asn
* * ÷ NZ_CP009273 2062048 2062107 60 2 [1] [1] 2 BW25113_RS10415/BW25113_RS24005 IS5‑like element IS5 family transposase/TonB‑dependent receptor plug domain‑containing protein
* * ÷ NZ_CP009273 2064859 2064880 22 2 [1] [1] 3 BW25113_RS10440/agn43 GTPase family protein/autotransporter adhesin Ag43
* * ÷ NZ_CP009273 2079496 2079520 25 3 [1] [0] 2 plaP putrescine/proton symporter PlaP
* * ÷ NZ_CP009273 2083227 2083261 35 2 [1] [0] 2 yefM/hisL YoeB‑YefM toxin‑antitoxin system antitoxin YefM/his operon leader peptide
* * ÷ NZ_CP009273 2096859 2096871 13 6 [1] [1] 2 [wbbL] [wbbL]
* * ÷ NZ_CP009273 2097017 2097076 60 2 [1] [1] 3 wbbK glycosyltransferase family 1 protein
* * ÷ NZ_CP009273 2099135 2099170 36 2 [1] [1] 2 wbbI beta‑1,6‑galactofuranosyltransferase
* * ÷ NZ_CP009273 2099584 2099687 104 3 [1] [1] 2 wzy O16 family O‑antigen polymerase
* * ÷ NZ_CP009273 2100703 2100713 11 3 [0] [0] 4 [wzy]–[glf] [wzy],[glf]
* * ÷ NZ_CP009273 2102908 2102913 6 3 [0] [1] 6 wzx O16 family O‑antigen flippase
* * ÷ NZ_CP009273 2118183 2118203 21 2 [1] [0] 2 wcaI colanic acid biosynthesis fucosyltransferase WcaI
* * ÷ NZ_CP009273 2125388 2125441 54 3 [1] [1] 2 wcaC colanic acid biosynthesis glycosyltransferase WcaC
* * ÷ NZ_CP009273 2125595 2125653 59 3 [1] [1] 3 wcaB colanic acid biosynthesis acetyltransferase WcaB
* * ÷ NZ_CP009273 2131136 2131167 32 2 [0] [0] 2 wza/yegH polysaccharide export protein Wza/TerC family protein
* * ÷ NZ_CP009273 2142048 2142058 11 2 [1] [1] 2 yegD molecular chaperone
* * ÷ NZ_CP009273 2144474 2144513 40 2 [1] [1] 2 yegI/yegJ protein kinase YegI/DUF2314 domain‑containing protein
* * ÷ NZ_CP009273 2161649 2161661 13 2 [1] [1] 2 BW25113_RS10880 hypothetical protein
* * ÷ NZ_CP009273 2166179 2166221 43 3 [1] [1] 2 gatD galactitol‑1‑phosphate 5‑dehydrogenase
* * ÷ NZ_CP009273 2170075 2170141 67 3 [1] [1] 2 gatY tagatose‑bisphosphate aldolase subunit GatY
* * ÷ NZ_CP009273 2176363 2176408 46 2 [1] [1] 2 yegX glycoside hydrolase family 25 protein
* * ÷ NZ_CP009273 2196490 2196504 15 2 [1] [0] 2 BW25113_RS11045 DUF4132 domain‑containing protein
* * ÷ NZ_CP009273 2212607 2212670 64 3 [1] [1] 2 osmF glycine betaine ABC transporter substrate‑binding protein OsmF
* * ÷ NZ_CP009273 2235583 2235597 15 2 [1] [1] 2 yeiB DUF418 family protein
* * ÷ NZ_CP009273 2243109 2243171 63 3 [1] [0] 4 yeiE/yeiH DNA‑binding transcriptional regulator YeiE/YeiH family protein
* * ÷ NZ_CP009273 2249344 2249408 65 2 [1] [1] 2 yeiL transcriptional regulator YeiL
* * ÷ NZ_CP009273 2287698 2287715 18 3 [1] [0] 2 ccmF cytochrome c‑type biogenesis heme lyase CcmF
* * ÷ NZ_CP009273 2300312 2300363 52 2 [0] [1] 3 mqo/yojI malate dehydrogenase (quinone)/microcin J25 efflux ABC transporter YojI
* * ÷ NZ_CP009273 2348489 2348525 37 3 [1] [1] 2 glpB glycerol‑3‑phosphate dehydrogenase subunit GlpB
* * ÷ NZ_CP009273 2357862 2357984 123 2 [1] [1] 2 yfaZ/nudI YfaZ family protein/nucleoside triphosphatase NudI
* * ÷ NZ_CP009273 2359238 2359311 74 3 [0] [1] 2 ais/arnB lipopolysaccharide core heptose(II)‑phosphate phosphatase Ais/UDP‑4‑amino‑4‑deoxy‑L‑arabinose aminotransferase
* * ÷ NZ_CP009273 2379200 2379255 56 2 [0] [0] 2 [yfbK] [yfbK]
* * ÷ NZ_CP009273 2398738 2398767 30 4 [1] [1] 3 nuoA/lrhA NADH‑quinone oxidoreductase subunit NuoA/transcriptional regulator LrhA
* * ÷ NZ_CP009273 2400597 2400640 44 2 [1] [1] 2 lrhA/alaA transcriptional regulator LrhA/alanine transaminase AlaA
* * ÷ NZ_CP009273 2400844 2400854 11 2 [0] [1] 3 lrhA/alaA transcriptional regulator LrhA/alanine transaminase AlaA
* * ÷ NZ_CP009273 2419801 2419844 44 2 [1] [1] 2 hisJ histidine ABC transporter substrate‑binding protein HisJ
* * ÷ NZ_CP009273 2449139 2449163 25 3 [1] [0] 2 yfcV/sixA fimbrial protein/phosphohistidine phosphatase SixA
* * ÷ NZ_CP009273 2449281 2449321 41 3 [1] [1] 2 yfcV/sixA fimbrial protein/phosphohistidine phosphatase SixA
* * ÷ NZ_CP009273 2462759 2462763 5 2 [0] [0] 2 BW25113_RS12270 hypothetical protein
* * ÷ NZ_CP009273 2462817 2463237 421 2 [0] [1] 2 BW25113_RS12270 hypothetical protein
* * ÷ NZ_CP009273 2463596 2463780 185 2 [1] [1] 2 BW25113_RS12270 hypothetical protein
* * ÷ NZ_CP009273 2467450 2467497 48 2 [1] [0] 3 BW25113_RS12305/yfdQ hypothetical protein/YfdQ family protein
* * ÷ NZ_CP009273 2488097 2488138 42 2 [1] [0] 2 yfdX/ypdI YfdX family protein/colanic acid biosynthesis lipoprotein YpdI
* * ÷ NZ_CP009273 2564590 2564609 20 3 [1] [1] 2 eutE aldehyde dehydrogenase EutE
* * ÷ NZ_CP009273 2569309 2569336 28 2 [0] [0] 2 eutS/maeB ethanolamine utilization microcompartment protein EutS/NADP‑dependent oxaloacetate‑decarboxylating malate dehydrogenase
* * ÷ NZ_CP009273 2584428 2584493 66 2 [0] [1] 2 ypfM/yffB protein YpfM/ArsC family reductase
* * ÷ NZ_CP009273 2614346 2614421 76 2 [1] [1] 2 upp/purM uracil phosphoribosyltransferase/phosphoribosylformylglycinamidine cyclo‑ligase
* * ÷ NZ_CP009273 2622963 2623095 133 2 [0] [1] 2 yfgG/yfgH YfgG family protein/glycine zipper 2TM domain‑containing protein
* * ÷ NZ_CP009273 2628347 2628390 44 3 [1] [1] 2 xseA exodeoxyribonuclease VII large subunit
* * ÷ NZ_CP009273 2631663 2631688 26 2 [1] [0] 2 bamB outer membrane protein assembly factor BamB
* * ÷ NZ_CP009273 2646941 2647007 67 2 [1] [1] 2 sseA/timP 3‑mercaptopyruvate sulfurtransferase/small toxic inner membrane protein TimP
* * ÷ NZ_CP009273 2667426 2667511 86 2 [1] [1] 2 yphB aldose 1‑epimerase
* * ÷ NZ_CP009273 2671294 2671329 36 2 [1] [1] 2 yphE sugar ABC transporter ATP‑binding protein
* * ÷ NZ_CP009273 2708704 2708748 45 2 [1] [1] 2 yfiE/eamB LysR family transcriptional regulator/cysteine/O‑acetylserine transporter
* * ÷ NZ_CP009273 2719174 2719210 37 2 [1] [1] 2 kgtP/rrf alpha‑ketoglutarate permease/5S ribosomal RNA
* * ÷ NZ_CP009273 2751012 2751149 138 2 [1] [1] 2 BW25113_RS13685 hypothetical protein
* * ÷ NZ_CP009273 2753652 2753740 89 2 [1] [1] 4 yfjI YfjI family protein
* * ÷ NZ_CP009273 2767722 2767811 90 2 [1] [1] 2 BW25113_RS13770 hypothetical protein
* * ÷ NZ_CP009273 2772481 2772492 12 2 [1] [1] 2 ypjA adhesin‑like autotransporter YpjA/EhaD
* * ÷ NZ_CP009273 2776915 2776951 37 2 [1] [1] 2 BW25113_RS24210/BW25113_RS25705 recombinase family protein/DUF5507 domain‑containing protein
* * ÷ NZ_CP009273 2777897 2777938 42 3 [1] [1] 2 BW25113_RS25705 DUF5507 domain‑containing protein
* * ÷ NZ_CP009273 2778504 2778626 123 3 [1] [1] 2 BW25113_RS25705/BW25113_RS13825 DUF5507 domain‑containing protein/tRNA‑Ile
* * ÷ NZ_CP009273 2779402 2779429 28 2 [0] [0] 2 BW25113_RS13825/BW25113_RS26005 tRNA‑Ile/alpha‑amylase family glycosyl hydrolase
* * ÷ NZ_CP009273 2779473 2779481 9 2 [0] [1] 2 BW25113_RS13825/BW25113_RS26005 tRNA‑Ile/alpha‑amylase family glycosyl hydrolase
* * ÷ NZ_CP009273 2779572 2779621 50 2 [1] [0] 2 BW25113_RS13825/BW25113_RS26005 tRNA‑Ile/alpha‑amylase family glycosyl hydrolase
* * ÷ NZ_CP009273 2779684 2779731 48 3 [1] [1] 2 BW25113_RS13825/BW25113_RS26005 tRNA‑Ile/alpha‑amylase family glycosyl hydrolase
* * ÷ NZ_CP009273 2779871 2779888 18 3 [1] [1] 2 BW25113_RS26005 alpha‑amylase family glycosyl hydrolase
* * ÷ NZ_CP009273 2781998 2782014 17 3 [1] [1] 2 [BW25113_RS26005] [BW25113_RS26005]
* * ÷ NZ_CP009273 2783772 2783792 21 2 [0] [1] 2 lhgO L‑2‑hydroxyglutarate oxidase
* * ÷ NZ_CP009273 2792288 2792328 41 2 [1] [1] 2 stpA/alaE DNA‑binding protein StpA/L‑alanine exporter AlaE
* * ÷ NZ_CP009273 2834100 2834120 21 2 [1] [1] 2 ascF PTS cellobiose/arbutin/salicin transporter subunit IIBC
* * ÷ NZ_CP009273 2847433 2847456 24 2 [1] [1] 3 hypE hydrogenase maturation carbamoyl dehydratase HypE
* * ÷ NZ_CP009273 2857589 2857636 48 2 [1] [1] 2 [ygbL]–[ygbM] [ygbL],[ygbM]
* * ÷ NZ_CP009273 2877697 2877791 95 2 [0] [1] 2 casA/cas3 type I‑E CRISPR‑associated protein Cse1/CasA/CRISPR‑associated helicase/endonuclease Cas3
* * ÷ NZ_CP009273 2896913 2897012 100 2 [1] [1] 2 ygcE/queE FGGY‑family carbohydrate kinase/7‑carboxy‑7‑deazaguanine synthase QueE
* * ÷ NZ_CP009273 2897124 2897259 136 2 [0] [1] 2 ygcE/queE FGGY‑family carbohydrate kinase/7‑carboxy‑7‑deazaguanine synthase QueE
* * ÷ NZ_CP009273 2898939 2898995 57 2 [1] [1] 3 BW25113_RS14445 hypothetical protein
* * ÷ NZ_CP009273 2972264 2972296 33 2 [0] [1] 2 lysA/lysR diaminopimelate decarboxylase/DNA‑binding transcriptional regulator LysR
* * ÷ NZ_CP009273 2977572 2977577 6 2 [1] [1] 2 kduI/yqeF 5‑dehydro‑4‑deoxy‑D‑glucuronate isomerase/acetyl‑CoA C‑acetyltransferase
* * ÷ NZ_CP009273 2981757 2981811 55 2 [0] [1] 4 yqeH/yqeI helix‑turn‑helix transcriptional regulator/transcriptional regulator
* * ÷ NZ_CP009273 2983821 2983843 23 2 [1] [1] 2 BW25113_RS14820/BW25113_RS14825 hypothetical protein/hypothetical protein
* * ÷ NZ_CP009273 2984134 2984156 23 2 [1] [1] 2 BW25113_RS14825 hypothetical protein
* * ÷ NZ_CP009273 2987749 2987759 11 3 [0] [1] 5 BW25113_RS14845 lytic transglycosylase domain‑containing protein
* * ÷ NZ_CP009273 2988525 2988647 123 2 [0] [1] 2 BW25113_RS14850/BW25113_RS26010 response regulator transcription factor/hypothetical protein
* * ÷ NZ_CP009273 3029050 3029069 20 3 [0] [1] 2 prfB peptide chain release factor 2
* * ÷ NZ_CP009273 3072801 3072902 102 2 [0] [1] 2 cmtB/tkt PTS mannitol transporter subunit IIA/transketolase
* * ÷ NZ_CP009273 3112495 3112520 26 2 [0] [1] 2 sslE/glcA lipoprotein metalloprotease SslE/glycolate permease GlcA
* * ÷ NZ_CP009273 3165523 3165576 54 4 [1] [1] 3 [ygiZ] [ygiZ]
* * ÷ NZ_CP009273 3176925 3177005 81 2 [1] [1] 2 BW25113_RS25885/ribB hypothetical protein/3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase
* * ÷ NZ_CP009273 3179380 3180705–3179454 75–1326 2 [1] [1] 2 BW25113_RS15805–[BW25113_RS15805] BW25113_RS15805,[BW25113_RS15805]
* * ÷ NZ_CP009273 3220945 3220987 43 2 [1] [1] 2 ygjI amino acid permease
* * ÷ NZ_CP009273 3222226 3222246 21 2 [0] [1] 3 [ygjJ] [ygjJ]
* * ÷ NZ_CP009273 3246062 3246184 123 3 [1] [1] 2 yhaH/yhaI DUF805 domain‑containing protein/DUF805 domain‑containing protein
* * ÷ NZ_CP009273 3246662 3246683 22 3 [1] [1] 2 [yhaJ] [yhaJ]
* * ÷ NZ_CP009273 3262631 3262708 78 3 [1] [0] 2 yhaC YhaC family protein
* * ÷ NZ_CP009273 3280377 3280402 26 3 [0] [1] 2 [agaI] [agaI]
* * ÷ NZ_CP009273 3280514 3280557 44 3 [1] [0] 2 agaI/yraH galactosamine‑6‑phosphate isomerase/fimbrial protein
* * ÷ NZ_CP009273 3280599 3280761 163 3 [1] [1] 2 agaI/yraH galactosamine‑6‑phosphate isomerase/fimbrial protein
* * ÷ NZ_CP009273 3294700 3294711 12 2 [1] [0] 2 ubiT/ubiU SCP2 domain‑containing protein/U32 family peptidase
* * ÷ NZ_CP009273 3343820 3343882 63 2 [1] [1] 2 elbB/arcB isoprenoid biosynthesis glyoxalase ElbB/aerobic respiration two‑component sensor histidine kinase ArcB
* * ÷ NZ_CP009273 3354409 3354533 125 2 [1] [1] 2 gltD/gltF glutamate synthase subunit GltD/DUF1120 domain‑containing protein
* * ÷ NZ_CP009273 3378672 3378788 117 3 [1] [1] 3 argR/yhcN transcriptional regulator ArgR/peroxide/acid stress response protein YhcN
* * ÷ NZ_CP009273 3448779 3448879 101 2 [1] [0] 3 gspA/gspC type II secretion system protein GspA/type II secretion system protein GspC
* * ÷ NZ_CP009273 3463215 3463394 180 2 [1] [1] 2 chiA/tuf bifunctional chitinase/lysozyme/elongation factor Tu
* * ÷ NZ_CP009273 3505722 3505736 15 3 [1] [0] 5 BW25113_RS17530/trpS GntR family transcriptional regulator YhfZ/tryptophan‑‑tRNA ligase
* * ÷ NZ_CP009273 3575454 3575462 9 3 [1] [0] 2 hcp Hcp1 family type VI secretion system effector
* * ÷ NZ_CP009273 3575534 3575541 8 2 [0] [1] 2 hcp Hcp1 family type VI secretion system effector
* * ÷ NZ_CP009273 3576455 3576548 94 2 [1] [0] 2 BW25113_RS17825 YrhA family protein
* * ÷ NZ_CP009273 3616898 3616906 9 2 [1] [0] 2 yhhH YbbC/YhhH family protein
* * ÷ NZ_CP009273 3644325 3644343 19 3 [1] [0] 2 arsC/BW25113_RS18155 glutaredoxin‑dependent arsenate reductase/hypothetical protein
* * ÷ NZ_CP009273 3645334 3645338 5 2 [1] [0] 6 BW25113_RS18155 hypothetical protein
* * ÷ NZ_CP009273 3647242 3647290 49 3 [1] [1] 2 BW25113_RS18165/slp hypothetical protein/outer membrane lipoprotein Slp
* * ÷ NZ_CP009273 3659411 3659431 21 2 [1] [0] 6 gadX/gadA acid resistance transcriptional activator GadX/glutamate decarboxylase
* * ÷ NZ_CP009273 3717932 3718005 74 2 [1] [0] 5 glyQ glycine‑‑tRNA ligase subunit alpha
* * ÷ NZ_CP009273 3745293 3745340 48 2 [1] [0] 2 yiaT/yiaU MipA/OmpV family protein/LysR family transcriptional regulator
* * ÷ NZ_CP009273 3763096 3763106 11 2 [0] [0] 5 BW25113_RS26240 Imm57 family immunity protein
* * ÷ NZ_CP009273 3763248 3763258 11 2 [1] [1] 2 BW25113_RS26240/yibH Imm57 family immunity protein/HlyD family secretion protein
* * ÷ NZ_CP009273 3787055 3787104 50 2 [0] [1] 2 yibB/rfaD protein YibB/ADP‑glyceromanno‑heptose 6‑epimerase
* * ÷ NZ_CP009273 3790400 3790509 110 2 [1] [1] 2 waaL O‑antigen ligase
* * ÷ NZ_CP009273 3791535 3791569 35 2 [0] [1] 2 [waaL] [waaL]
* * ÷ NZ_CP009273 3792437 3792606 170 2 [1] [1] 2 waaU glycosyltransferase family 9 protein
* * ÷ NZ_CP009273 3793122 3793124 3 2 [0] [0] 4 waaZ 3‑deoxy‑D‑manno‑oct‑2‑ulosonate III transferase WaaZ
* * ÷ NZ_CP009273 3794633 3794653 21 3 [0] [0] 2 rfaJ lipopolysaccharide 1,2‑glucosyltransferase RfaJ
* * ÷ NZ_CP009273 3797689 3797730 42 2 [0] [1] 2 rfaS LPS core biosynthesis protein RfaS
* * ÷ NZ_CP009273 3798389 3798473 85 2 [1] [1] 2 rfaS LPS core biosynthesis protein RfaS
* * ÷ NZ_CP009273 3830048 3830103 56 2 [0] [0] 2 BW25113_RS26245/setC virulence RhuM family protein/sugar efflux transporter
* * ÷ NZ_CP009273 3900161 3900184 24 2 [0] [1] 3 bglG/phoU transcriptional antiterminator BglG/phosphate signaling complex protein PhoU
* * ÷ NZ_CP009273 3916111 3916164 54 3 [1] [1] 2 atpI/rsmG F0F1 ATP synthase subunit I/16S rRNA (guanine(527)‑N(7))‑methyltransferase RsmG
* * ÷ NZ_CP009273 3943538 3943576 39 2 [0] [1] 3 yifB/ilvL YifB family Mg chelatase‑like AAA ATPase/ilv operon leader peptide
* * ÷ NZ_CP009273 4037418 4037473 56 2 [0] [1] 2 dsbA/yihF thiol:disulfide interchange protein DsbA/YdgA family protein
* * ÷ NZ_CP009273 4043121 4043144 24 3 [0] [1] 2 polA/yihA DNA polymerase I/ribosome biogenesis GTP‑binding protein YihA/YsxC
* * ÷ NZ_CP009273 4072138 4072158 21 2 [1] [1] 2 fabY/BW25113_RS26270 fatty acid biosynthesis protein FabY/hypothetical protein
* * ÷ NZ_CP009273 4079898 4079930 33 2 [1] [1] 2 fdhD formate dehydrogenase accessory sulfurtransferase FdhD
* * ÷ NZ_CP009273 4080331 4080398 68 2 [0] [1] 2 [yiiG] [yiiG]
* * ÷ NZ_CP009273 4102504 4102540 37 2 [1] [1] 2 yiiR DUF805 domain‑containing protein
* * ÷ NZ_CP009273 4221641 4221675 35 3 [1] [1] 2 yjbD/lysC DUF3811 domain‑containing protein/lysine‑sensitive aspartokinase 3
* * ÷ NZ_CP009273 4225534 4225606 73 3 [1] [1] 2 pgi/yjbE glucose‑6‑phosphate isomerase/exopolysaccharide production protein YjbE
* * ÷ NZ_CP009273 4241485 4241622 138 2 [1] [1] 2 BW25113_RS20970 SopA family protein
* * ÷ NZ_CP009273 4258454 4258471 18 2 [0] [1] 3 tyrB/BW25113_RS26020 aromatic amino acid transaminase/hypothetical protein
* * ÷ NZ_CP009273 4266202 4266224 23 2 [1] [1] 2 pdeC c‑di‑GMP phosphodiesterase PdeC
* * ÷ NZ_CP009273 4272695 4272849 155 2 [1] [1] 2 espX5 T3SS effector pentapeptide repeat protein EspX5
* * ÷ NZ_CP009273 4302918 4302959 42 2 [1] [1] 2 alsR/rpiB als operon DNA‑binding transcriptional repressor AlsR/bifunctional allose‑6‑phosphate isomerase/ribose‑5‑phosphate isomerase RpiB
* * ÷ NZ_CP009273 4316779 4316881 103 2 [1] [1] 2 yjdM/crfC zinc ribbon domain‑containing protein YjdM/clamp‑binding protein CrfC
* * ÷ NZ_CP009273 4465872 4465894 23 2 [1] [0] 5 BW25113_RS22080 hypothetical protein
* * ÷ NZ_CP009273 4466835 4466907 73 2 [0] [1] 2 BW25113_RS22080 hypothetical protein
* * ÷ NZ_CP009273 4494816 4494876 61 2 [1] [1] 2 nanX MFS transporter
* * ÷ NZ_CP009273 4511595 4511608 14 2 [1] [1] 3 yjhF GntP family permease
* * ÷ NZ_CP009273 4530470 4530485 16 2 [0] [0] 2 nanC/fimB N‑acetylneuraminic acid outer membrane channel NanC/type 1 fimbria switch DNA invertase FimB
* * ÷ NZ_CP009273 4531650 4531746 97 3 [1] [1] 2 fimB/fimE type 1 fimbria switch DNA invertase FimB/type 1 fimbria switch DNA invertase FimE
* * ÷ NZ_CP009273 4532508 4532620 113 3 [0] [1] 3 fimE/fimA type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA
* * ÷ NZ_CP009273 4546371 4546458 88 2 [0] [1] 2 yjiC/idlP YjfZ/YjiC family protein/iraD leader peptide IdlP
* * ÷ NZ_CP009273 4581323 4581336 14 3 [1] [1] 3 btsT/tsr pyruvate/proton symporter BtsT/methyl‑accepting chemotaxis protein
* * ÷ NZ_CP009273 4630526 4630582 57 2 [1] [1] 2 BW25113_RS22930/yjtD hypothetical protein/tRNA/rRNA methyltransferase

Unassigned new junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP009273 360104 =NA (NA)15 (1.330) 10/166 0.2 65.2% intergenic (‑35/+251) lacZ/BW25113_RS23320 beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein
?NZ_CP009273 = 360286 8 (0.710)intergenic (‑217/+69) lacZ/BW25113_RS23320 beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein
* ? NZ_CP009273 1203246 =12 (1.060)6 (0.660) 4/134 0.6 46.7% coding (290/630 nt) BW25113_RS05990 hypothetical protein
?NZ_CP009273 1205075 = 4 (0.440)coding (40/540 nt) BW25113_RS06005 phage tail protein
* ? NZ_CP009273 = 1391494NA (NA)12 (1.070) 6/164 0.5 100% intergenic (+145/‑128) BW25113_RS06980/ynaJ IS5‑like element IS5 family transposase/DUF2534 family protein
?NZ_CP009273 1972747 = 0 (0.000)intergenic (‑293/‑487) flhD/uspC flagellar transcriptional regulator FlhD/universal stress protein UspC
* ? NZ_CP009273 = 19727510 (0.000)19 (1.680) 13/166 0.1 100% intergenic (‑297/‑483) flhD/uspC flagellar transcriptional regulator FlhD/universal stress protein UspC
?NZ_CP009273 = 2283592 NA (NA)intergenic (‑68/‑387) BW25113_RS11435/narP IS5‑like element IS5 family transposase/nitrate/nitrite response regulator protein NarP
* ? NZ_CP009273 = 45325070 (0.000)3 (0.300) 3/148 0.9 66.7% intergenic (+57/‑425) fimE/fimA type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA
?NZ_CP009273 = 4532803 3 (0.300)intergenic (+353/‑129) fimE/fimA type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA