breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
Predicted mutations | |||||
---|---|---|---|---|---|
evidence | position | mutation | annotation | gene | description |
RA | 49,785 | C→T | intergenic (+154/‑38) | kefC → / → folA | glutathione‑regulated potassium‑efflux system protein KefC/type 3 dihydrofolate reductase |
JC | 1,613,496 | (CTGGATATTACCGCG)1→2 | coding (120/435 nt) | marR → | multiple antibiotic resistance transcriptional regulator MarR |
MC JC | 2,399,465 | Δ7 bp | coding (650‑656/939 nt) | lrhA ← | transcriptional regulator LrhA |
RA | 3,754,231 | G→T | R127S (CGC→AGC) | selA ← | L‑seryl‑tRNA(Sec) selenium transferase |
Unassigned missing coverage evidence | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NZ_CP009273 | 307236 | 307279 | 44 | 2 [1] | [1] 2 | ecpR/BW25113_RS01515 | ECP biosynthesis operon DNA‑binding transcriptional regulator EcpR/hypothetical protein |
* | * | ÷ | NZ_CP009273 | 356981 | 357580 | 600 | 2 [0] | [1] 2 | [lacA] | [lacA] |
* | * | ÷ | NZ_CP009273 | 382523 | 382541 | 19 | 2 [1] | [1] 2 | tauC | taurine ABC transporter permease TauC |
* | * | ÷ | NZ_CP009273 | 404815 | 404821 | 7 | 2 [1] | [0] 2 | rdgC | recombination‑associated protein RdgC |
* | * | ÷ | NZ_CP009273 | 578977 | 579059 | 83 | 2 [1] | [0] 2 | BW25113_RS26085/appY | tail fiber assembly protein/DNA‑binding transcriptional activator AppY |
* | * | ÷ | NZ_CP009273 | 587696 | 587714 | 19 | 2 [1] | [1] 2 | nrfB | cyclic di‑3',5'‑guanylate‑activated glycosyltransferase NrfB |
* | * | ÷ | NZ_CP009273 | 716403 | 716449 | 47 | 2 [0] | [1] 3 | BW25113_RS26090/kdpE | leader peptide SpeFL/two‑component system response regulator KdpE |
* | * | ÷ | NZ_CP009273 | 738358 | 738368 | 11 | 3 [0] | [1] 2 | ybgI | radiation resistance protein YbgI |
* | * | ÷ | NZ_CP009273 | 785878 | 785890 | 13 | 2 [1] | [1] 2 | galT | galactose‑1‑phosphate uridylyltransferase |
* | * | ÷ | NZ_CP009273 | 806178 | 806217 | 40 | 2 [1] | [0] 2 | bioF | 8‑amino‑7‑oxononanoate synthase |
* | * | ÷ | NZ_CP009273 | 827485 | 827529 | 45 | 5 [0] | [1] 2 | rhlE | ATP‑dependent RNA helicase RhlE |
* | * | ÷ | NZ_CP009273 | 877635 | 877658 | 24 | 2 [1] | [1] 2 | deoR | DNA‑binding transcriptional repressor DeoR |
* | * | ÷ | NZ_CP009273 | 903003 | 903077 | 75 | 2 [1] | [1] 2 | ybjT | SDR family oxidoreductase |
* | * | ÷ | NZ_CP009273 | 933389 | 933436 | 48 | 2 [0] | [1] 2 | lolA | outer membrane lipoprotein chaperone LolA |
* | * | ÷ | NZ_CP009273 | 982945 | 982990 | 46 | 2 [1] | [1] 2 | ompF/asnS | porin OmpF/asparagine‑‑tRNA ligase |
* | * | ÷ | NZ_CP009273 | 993860 | 993904 | 45 | 2 [0] | [1] 2 | [elfA] | [elfA] |
* | * | ÷ | NZ_CP009273 | 1088364 | 1088369 | 6 | 4 [0] | [1] 2 | dgcT | GGDEF domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1114555 | 1114663 | 109 | 3 [1] | [1] 2 | yceJ/BW25113_RS05515 | cytochrome b/YceO family protein |
* | * | ÷ | NZ_CP009273 | 1115960 | 1115995 | 36 | 3 [0] | [1] 2 | solA | N‑methyl‑L‑tryptophan oxidase |
* | * | ÷ | NZ_CP009273 | 1118164 | 1118176 | 13 | 2 [1] | [1] 2 | [yceB] | [yceB] |
* | * | ÷ | NZ_CP009273 | 1148897 | 1148918 | 22 | 2 [1] | [1] 2 | pabC | aminodeoxychorismate lyase |
* | * | ÷ | NZ_CP009273 | 1168969 | 1168992 | 24 | 2 [1] | [1] 3 | mfd | transcription‑repair coupling factor |
* | * | ÷ | NZ_CP009273 | 1187379 | 1187392 | 14 | 2 [1] | [0] 3 | purB | adenylosuccinate lyase |
* | * | ÷ | NZ_CP009273 | 1225285 | 1225323 | 39 | 2 [1] | [0] 3 | hlyE | hemolysin HlyE |
* | * | ÷ | NZ_CP009273 | 1258945 | 1259003 | 59 | 2 [1] | [0] 2 | [lolB] | [lolB] |
* | * | ÷ | NZ_CP009273 | 1265262 | 1265282–1265272 | 11–21 | 2 [0] | [1] 2 | [BW25113_RS06335] | [BW25113_RS06335] |
* | * | ÷ | NZ_CP009273 | 1306010 | 1306029 | 20 | 2 [1] | [1] 2 | tonB | TonB system transport protein TonB |
* | * | ÷ | NZ_CP009273 | 1314744 | 1314820 | 77 | 3 [1] | [1] 2 | trpD | bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD |
* | * | ÷ | NZ_CP009273 | 1320930 | 1320946 | 17 | 3 [1] | [1] 3 | yciQ/rluB | DUF2207 domain‑containing protein/23S rRNA pseudouridine(2605) synthase RluB |
* | * | ÷ | NZ_CP009273 | 1359123 | 1359181 | 59 | 4 [1] | [0] 3 | puuB | gamma‑glutamylputrescine oxidase |
* | * | ÷ | NZ_CP009273 | 1370681 | 1370691 | 11 | 2 [0] | [0] 2 | ycjR | sugar phosphate isomerase/epimerase |
* | * | ÷ | NZ_CP009273 | 1384013 | 1384109 | 97 | 2 [1] | [1] 2 | ycjG | L‑Ala‑D/L‑Glu epimerase |
* | * | ÷ | NZ_CP009273 | 1398035 | 1398089 | 55 | 4 [1] | [1] 3 | abgA | p‑aminobenzoyl‑glutamate hydrolase subunit AbgA |
* | * | ÷ | NZ_CP009273 | 1416798 | 1416814 | 17 | 2 [1] | [1] 2 | ydaV | ATP‑binding protein |
* | * | ÷ | NZ_CP009273 | 1433059 | 1433137 | 79 | 2 [1] | [1] 2 | nifJ | pyruvate:ferredoxin (flavodoxin) oxidoreductase |
* | * | ÷ | NZ_CP009273 | 1437779 | 1437813 | 35 | 2 [1] | [1] 2 | ydbH | YdbH family protein |
* | * | ÷ | NZ_CP009273 | 1459454 | 1459482 | 29 | 2 [1] | [0] 2 | BW25113_RS25580 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 1476858 | 1476882 | 25 | 2 [1] | [1] 4 | azoR | FMN‑dependent NADH‑azoreductase |
* | * | ÷ | NZ_CP009273 | 1484045 | 1484061 | 17 | 2 [1] | [1] 2 | gap | type I glyceraldehyde‑3‑phosphate dehydrogenase |
* | * | ÷ | NZ_CP009273 | 1499420 | 1499493 | 74 | 2 [1] | [1] 3 | ydcO | BenE family transporter YdcO |
* | * | ÷ | NZ_CP009273 | 1540288 | 1540321 | 34 | 3 [1] | [1] 2 | yddL/yddG | porin/aromatic amino acid efflux DMT transporter YddG |
* | * | ÷ | NZ_CP009273 | 1541306 | 1541313 | 8 | 2 [1] | [1] 2 | yddG | aromatic amino acid efflux DMT transporter YddG |
* | * | ÷ | NZ_CP009273 | 1560914 | 1560971 | 58 | 2 [1] | [1] 3 | dosC | diguanylate cyclase DosC |
* | * | ÷ | NZ_CP009273 | 1576819 | 1576841 | 23 | 2 [1] | [1] 2 | ydeN/ydeO | sulfatase/acid stress response transcriptional regulator YdeO |
* | * | ÷ | NZ_CP009273 | 1586351 | 1586363 | 13 | 6 [1] | [1] 2 | hipA | type II toxin‑antitoxin system serine/threonine protein kinase toxin HipA |
* | * | ÷ | NZ_CP009273 | 1592539 | 1592553 | 15 | 2 [1] | [1] 2 | BW25113_RS07915/lsrK | ECSE_1600 family autotransporter/autoinducer‑2 kinase |
* | * | ÷ | NZ_CP009273 | 1598631 | 1598658 | 28 | 2 [0] | [1] 3 | lsrD | autoinducer 2 ABC transporter permease LsrD |
* | * | ÷ | NZ_CP009273 | 1618470 | 1618485 | 16 | 2 [0] | [1] 2 | ydeI | YdeI family stress tolerance OB fold protein |
* | * | ÷ | NZ_CP009273 | 1620493 | 1620531 | 39 | 3 [0] | [1] 2 | dcp | peptidyl‑dipeptidase Dcp |
* | * | ÷ | NZ_CP009273 | 1646924 | 1646996 | 73 | 2 [1] | [1] 2 | [BW25113_RS25635] | [BW25113_RS25635] |
* | * | ÷ | NZ_CP009273 | 1663580 | 1663600 | 21 | 2 [0] | [0] 2 | ynfL | LysR family transcriptional regulator |
* | * | ÷ | NZ_CP009273 | 1663638 | 1663782 | 145 | 3 [1] | [1] 2 | ynfL | LysR family transcriptional regulator |
* | * | ÷ | NZ_CP009273 | 1671486 | 1671495 | 10 | 2 [0] | [0] 2 | pntA | Re/Si‑specific NAD(P)(+) transhydrogenase subunit alpha |
* | * | ÷ | NZ_CP009273 | 1681655 | 1681673 | 19 | 3 [1] | [1] 2 | fumB | class I fumarate hydratase |
* | * | ÷ | NZ_CP009273 | 1681952 | 1681958 | 7 | 2 [0] | [1] 4 | fumB | class I fumarate hydratase |
* | * | ÷ | NZ_CP009273 | 1699955 | 1699985 | 31 | 2 [1] | [1] 3 | ydgK/rsxA | DUF2569 domain‑containing protein/electron transport complex subunit RsxA |
* | * | ÷ | NZ_CP009273 | 1731438 | 1731545 | 108 | 2 [1] | [1] 3 | ydhP | MFS transporter |
* | * | ÷ | NZ_CP009273 | 1731671 | 1731698 | 28 | 2 [0] | [1] 2 | ydhP/ynhF | MFS transporter/cytochrome bd‑I accessory subunit CydH |
* | * | ÷ | NZ_CP009273 | 1736312 | 1736338 | 27 | 2 [1] | [1] 2 | cfa | cyclopropane fatty acyl phospholipid synthase |
* | * | ÷ | NZ_CP009273 | 1751448 | 1751517 | 70 | 2 [1] | [1] 2 | pykF/lpp | pyruvate kinase PykF/murein lipoprotein Lpp |
* | * | ÷ | NZ_CP009273 | 1782269 | 1782320 | 52 | 2 [1] | [1] 2 | ppsR | posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR |
* | * | ÷ | NZ_CP009273 | 1808815 | 1808873 | 59 | 2 [1] | [1] 2 | katE | catalase HPII |
* | * | ÷ | NZ_CP009273 | 1819290 | 1819346 | 57 | 2 [1] | [0] 2 | ves/spy | environmental stress‑induced protein Ves/ATP‑independent periplasmic protein‑refolding chaperone Spy |
* | * | ÷ | NZ_CP009273 | 1820549 | 1820608 | 60 | 3 [1] | [1] 2 | astE | succinylglutamate desuccinylase |
* | * | ÷ | NZ_CP009273 | 1823772 | 1823780 | 9 | 2 [1] | [0] 2 | astD | succinylglutamate‑semialdehyde dehydrogenase |
* | * | ÷ | NZ_CP009273 | 1828943 | 1828953 | 11 | 4 [0] | [0] 2 | ydjY | lipoprotein YdjY |
* | * | ÷ | NZ_CP009273 | 1886959 | 1886963 | 5 | 2 [0] | [0] 2 | yoaA | ATP‑dependent DNA helicase |
* | * | ÷ | NZ_CP009273 | 1888054 | 1888114 | 61 | 2 [1] | [1] 2 | yoaB/yoaC | RidA family protein/DUF1889 family protein |
* | * | ÷ | NZ_CP009273 | 1917576 | 1917620 | 45 | 2 [1] | [1] 2 | pphA/yebY | protein‑serine/threonine phosphatase/YebY family protein |
* | * | ÷ | NZ_CP009273 | 1934477 | 1934539 | 63 | 2 [0] | [1] 2 | lpxM/mepM | lauroyl‑Kdo(2)‑lipid IV(A) myristoyltransferase/murein DD‑endopeptidase MepM |
* | * | ÷ | NZ_CP009273 | 1977196 | 1977238 | 43 | 6 [1] | [0] 2 | araG | arabinose ABC transporter ATP‑binding protein AraG |
* | * | ÷ | NZ_CP009273 | 1992562 | 1992600 | 39 | 4 [1] | [1] 2 | dcyD | D‑cysteine desulfhydrase |
* | * | ÷ | NZ_CP009273 | 2001117 | 2001197 | 81 | 2 [1] | [1] 2 | [amyA]–[yedD] | [amyA],[yedD] |
* | * | ÷ | NZ_CP009273 | 2005548 | 2005576 | 29 | 2 [1] | [1] 2 | BW25113_RS10120 | DUF5503 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 2010340 | 2010350 | 11 | 2 [0] | [1] 2 | fliI | flagellar protein export ATPase FliI |
* | * | ÷ | NZ_CP009273 | 2033140 | 2033236 | 97 | 2 [1] | [1] 3 | msrP | protein‑methionine‑sulfoxide reductase catalytic subunit MsrP |
* | * | ÷ | NZ_CP009273 | 2051441 | 2051446 | 6 | 2 [1] | [1] 2 | yeeN/BW25113_RS10360 | YebC/PmpR family DNA‑binding transcriptional regulator/tRNA‑Asn |
* | * | ÷ | NZ_CP009273 | 2081730 | 2081758 | 29 | 4 [1] | [1] 2 | [yeeY] | [yeeY] |
* | * | ÷ | NZ_CP009273 | 2125989 | 2126064 | 76 | 2 [1] | [1] 2 | [wcaB]–[wcaA] | [wcaB],[wcaA] |
* | * | ÷ | NZ_CP009273 | 2142461 | 2142502 | 42 | 2 [1] | [1] 2 | yegD | molecular chaperone |
* | * | ÷ | NZ_CP009273 | 2144474 | 2144494 | 21 | 2 [1] | [1] 2 | yegI/yegJ | protein kinase YegI/DUF2314 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 2156929 | 2156998 | 70 | 2 [1] | [1] 2 | baeS | two‑component system sensor histidine kinase BaeS |
* | * | ÷ | NZ_CP009273 | 2192967 | 2193025 | 59 | 2 [1] | [0] 2 | BW25113_RS25680 | WGR and DUF4132 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 2222156 | 2222196 | 41 | 2 [1] | [0] 2 | mdtQ | multidrug resistance outer membrane protein MdtQ |
* | * | ÷ | NZ_CP009273 | 2269080 | 2269093 | 14 | 2 [1] | [1] 2 | yejE | ABC transporter permease |
* | * | ÷ | NZ_CP009273 | 2303121 | 2303149 | 29 | 2 [0] | [1] 2 | ada | bifunctional DNA‑binding transcriptional regulator/O6‑methylguanine‑DNA methyltransferase Ada |
* | * | ÷ | NZ_CP009273 | 2359238 | 2359265 | 28 | 2 [1] | [1] 2 | ais/arnB | lipopolysaccharide core heptose(II)‑phosphate phosphatase Ais/UDP‑4‑amino‑4‑deoxy‑L‑arabinose aminotransferase |
* | * | ÷ | NZ_CP009273 | 2430276 | 2430281 | 6 | 2 [1] | [0] 2 | pdxB | 4‑phosphoerythronate dehydrogenase PdxB |
* | * | ÷ | NZ_CP009273 | 2463180 | 2463190 | 11 | 2 [0] | [1] 3 | BW25113_RS12270 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 2494953 | 2494963 | 11 | 3 [1] | [1] 2 | ypdC | AraC family transcriptional regulator |
* | * | ÷ | NZ_CP009273 | 2495753 | 2495766 | 14 | 2 [0] | [1] 2 | ptsP | phosphoenolpyruvate‑‑protein phosphotransferase |
* | * | ÷ | NZ_CP009273 | 2505243 | 2505270 | 28 | 2 [1] | [0] 3 | mntH | Nramp family divalent metal transporter |
* | * | ÷ | NZ_CP009273 | 2535184 | 2535199 | 16 | 3 [1] | [0] 2 | cysT | sulfate/thiosulfate ABC transporter permease CysT |
* | * | ÷ | NZ_CP009273 | 2536216 | 2536231 | 16 | 2 [1] | [1] 2 | cysP | thiosulfate/sulfate ABC transporter substrate‑binding protein CysP |
* | * | ÷ | NZ_CP009273 | 2559518 | 2559538 | 21 | 2 [1] | [1] 2 | eutA | ethanolamine ammonia‑lyase reactivating factor EutA |
* | * | ÷ | NZ_CP009273 | 2578015 | 2578040 | 26 | 3 [1] | [1] 2 | aegA | formate‑dependent uric acid utilization protein AegA |
* | * | ÷ | NZ_CP009273 | 2606472 | 2606496 | 25 | 2 [0] | [0] 3 | hyfR | DNA‑binding transcriptional regulator HyfR |
* | * | ÷ | NZ_CP009273 | 2646452 | 2646460 | 9 | 2 [0] | [1] 2 | sseA | 3‑mercaptopyruvate sulfurtransferase |
* | * | ÷ | NZ_CP009273 | 2673342 | 2673379 | 38 | 5 [0] | [1] 2 | yphG | DUF5107 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 2753665 | 2753752 | 88 | 2 [1] | [1] 2 | yfjI | YfjI family protein |
* | * | ÷ | NZ_CP009273 | 2843842 | 2843857 | 16 | 2 [1] | [1] 3 | hycA/hypA | formate hydrogenlyase regulator HycA/hydrogenase maturation nickel metallochaperone HypA |
* | * | ÷ | NZ_CP009273 | 3387048 | 3387067 | 20 | 2 [1] | [1] 3 | yhdP | AsmA2 domain‑containing protein YhdP |
* | * | ÷ | NZ_CP009273 | 3628272 | 3629173 | 902 | 29 [0] | [0] 2 | yhiM | DUF2776 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 3629221 | 3629650 | 430 | 2 [0] | [1] 3 | [yhiM]–[yhiN] | [yhiM],[yhiN] |
* | * | ÷ | NZ_CP009273 | 3629816 | 3630037 | 222 | 2 [1] | [1] 2 | yhiN | NAD(P)/FAD‑dependent oxidoreductase |
* | * | ÷ | NZ_CP009273 | 3630043 | 3630280 | 238 | 2 [1] | [1] 2 | yhiN | NAD(P)/FAD‑dependent oxidoreductase |
* | * | ÷ | NZ_CP009273 | 3630313 | 3630498 | 186 | 2 [1] | [1] 2 | yhiN | NAD(P)/FAD‑dependent oxidoreductase |
* | * | ÷ | NZ_CP009273 | 3630584 | 3631227 | 644 | 2 [1] | [1] 2 | [yhiN]–[pitA] | [yhiN],[pitA] |
* | * | ÷ | NZ_CP009273 | 3631230 | 3632286 | 1057 | 2 [1] | [0] 2 | pitA | inorganic phosphate transporter PitA |
* | * | ÷ | NZ_CP009273 | 3632340 | 3633380 | 1041 | 2 [0] | [0] 2 | [pitA]–uspB | [pitA],uspB |
* | * | ÷ | NZ_CP009273 | 3633465 | 3635559 | 2095 | 2 [0] | [1] 2 | uspA–[dtpB] | uspA,BW25113_RS26225,BW25113_RS26230,[dtpB] |
* | * | ÷ | NZ_CP009273 | 3635650 | 3637210 | 1561 | 2 [1] | [1] 2 | [dtpB]–[prlC] | [dtpB],rsmJ,[prlC] |
* | * | ÷ | NZ_CP009273 | 3637244 | 3637437 | 194 | 2 [1] | [1] 2 | prlC | oligopeptidase A |
* | * | ÷ | NZ_CP009273 | 3637494 | 3637801 | 308 | 2 [1] | [1] 2 | prlC | oligopeptidase A |
* | * | ÷ | NZ_CP009273 | 3637821 | 3638137 | 317 | 2 [1] | [1] 3 | prlC | oligopeptidase A |
* | * | ÷ | NZ_CP009273 | 3638183 | 3638259 | 77 | 2 [0] | [0] 2 | prlC | oligopeptidase A |
* | * | ÷ | NZ_CP009273 | 3638338 | 3642591 | 4254 | 2 [0] | [1] 2 | [prlC]–[arsB] | [prlC],rlmJ,gorA,dinQ,arsR,[arsB] |
* | * | ÷ | NZ_CP009273 | 3642651 | 3643525 | 875 | 2 [1] | [1] 2 | arsB | arsenite/antimonite:H(+) antiporter ArsB |
* | * | ÷ | NZ_CP009273 | 3643562 | 3644141 | 580 | 2 [1] | [0] 2 | [arsB]–arsC | [arsB],arsC |
* | * | ÷ | NZ_CP009273 | 3644179 | 3644229 | 51 | 2 [0] | [1] 2 | arsC/BW25113_RS18155 | glutaredoxin‑dependent arsenate reductase/hypothetical protein |
* | * | ÷ | NZ_CP009273 | 3644320 | 3646519–3645398 | 1079–2200 | 2 [1] | [1] 3 | BW25113_RS18155–[BW25113_RS18160] | BW25113_RS18155,[BW25113_RS18160] |
* | * | ÷ | NZ_CP009273 | 3781416 | 3781427 | 12 | 2 [0] | [1] 3 | envC | murein hydrolase activator EnvC |
* | * | ÷ | NZ_CP009273 | 4080276 | 4080295 | 20 | 2 [1] | [1] 2 | fdhD/yiiG | formate dehydrogenase accessory sulfurtransferase FdhD/YiiG family protein |
* | * | ÷ | NZ_CP009273 | 4141268 | 4141300 | 33 | 2 [1] | [1] 2 | ppc | phosphoenolpyruvate carboxylase |
* | * | ÷ | NZ_CP009273 | 4195347 | 4195352 | 6 | 2 [1] | [0] 2 | purD | phosphoribosylamine‑‑glycine ligase |
* | * | ÷ | NZ_CP009273 | 4207538 | 4207558 | 21 | 2 [0] | [1] 2 | aceA | isocitrate lyase |
Unassigned new junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NZ_CP009273 | 360104 = | NA (NA) | 15 (1.160) | 8/168 | 0.4 | NA | intergenic (‑35/+251) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein |
? | NZ_CP009273 | = 360286 | NA (NA) | intergenic (‑217/+69) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein | |||||
* | ? | NZ_CP009273 | 1203246 = | 4 (0.310) | 9 (0.860) | 9/136 | 0.2 | 80.9% | coding (290/630 nt) | BW25113_RS05990 | hypothetical protein |
? | NZ_CP009273 | 1205075 = | 1 (0.100) | coding (40/540 nt) | BW25113_RS06005 | phage tail protein | |||||
* | ? | NZ_CP009273 | = 1203261 | 4 (0.310) | 7 (0.670) | 5/136 | 0.6 | 76.8% | coding (305/630 nt) | BW25113_RS05990 | hypothetical protein |
? | NZ_CP009273 | = 1205058 | 1 (0.100) | coding (57/540 nt) | BW25113_RS06005 | phage tail protein | |||||
* | ? | NZ_CP009273 | = 1972751 | 1 (0.080) | 10 (0.770) | 7/168 | 0.5 | 90.9% | intergenic (‑297/‑483) | flhD/uspC | flagellar transcriptional regulator FlhD/universal stress protein UspC |
? | NZ_CP009273 | = 2283592 | NA (NA) | intergenic (‑68/‑387) | BW25113_RS11435/narP | IS5‑like element IS5 family transposase/nitrate/nitrite response regulator protein NarP | |||||
* | ? | NZ_CP009273 | 2282399 = | NA (NA) | 29 (2.260) | 18/166 | 0.0 | 100% | pseudogene (2/2532 nt) | yejO | autotransporter YejO |
? | NZ_CP009273 | = 3628271 | 0 (0.000) | coding (71/1053 nt) | yhiM | DUF2776 domain‑containing protein | |||||
* | ? | NZ_CP009273 | 4532499 = | 0 (0.000) | 5 (0.430) | 5/150 | 0.6 | 58.8% | intergenic (+49/‑433) | fimE/fimA | type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA |
? | NZ_CP009273 | 4532813 = | 7 (0.600) | intergenic (+363/‑119) | fimE/fimA | type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA | |||||
* | ? | NZ_CP009273 | = 4532507 | 0 (0.000) | 6 (0.520) | 6/150 | 0.5 | 63.2% | intergenic (+57/‑425) | fimE/fimA | type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA |
? | NZ_CP009273 | = 4532803 | 7 (0.600) | intergenic (+353/‑129) | fimE/fimA | type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA |