mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 349,999 | 0 | T | G | 60.0% | 1.5 / 16.0 | 15 | V528G (GTG→GGG) | prpE | propionate‑‑CoA ligase |
| * | NZ_CP009273 | 69,900 | 0 | A | C | 58.3% | 7.1 / 10.4 | 12 | V370G (GTG→GGG) | thiP | thiamine/thiamine pyrophosphate ABC transporter permease ThiP |
| * | NZ_CP009273 | 341,013 | 0 | C | A | 55.6% | 4.0 / 11.9 | 9 | intergenic (+311/‑102) | BW25113_RS01680/BW25113_RS01685 | hypothetical protein/hypothetical protein |
| * | NZ_CP009273 | 765,670 | 0 | G | T | 54.5% | 6.7 / 13.6 | 11 | S746I (AGT→ATT) | mngB | mannosylglycerate hydrolase |
| * | NZ_CP009273 | 350,001 | 0 | A | G | 53.8% | 8.4 / 14.7 | 13 | K529E (AAA→GAA) | prpE | propionate‑‑CoA ligase |
| * | NZ_CP009273 | 3,744,897 | 0 | A | C | 53.8% | 8.2 / 16.7 | 13 | V111G (GTT→GGT) | yiaT | MipA/OmpV family protein |
| * | NZ_CP009273 | 3,394,818 | 0 | T | C | 53.3% | 6.1 / 16.3 | 15 | D625G (GAT→GGT) | csrD | RNase E specificity factor CsrD |
| * | NZ_CP009273 | 2,465,390 | 0 | T | G | 22.2% | 28.8 / 11.1 | 18 | K90T (AAG→ACG) | BW25113_RS12285 | hypothetical protein |