mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | 3592725 = | 88 (0.600) | 3 (0.020) | 3/232 | NT | 3.5% | coding (424/702 nt) | urtE | urea ABC transporter ATP‑binding subunit UrtE |
| ? | NZ_CP034943 | = 3592721 | 83 (0.620) | coding (428/702 nt) | urtE | urea ABC transporter ATP‑binding subunit UrtE | |||||
| * | ? | NZ_CP034943 | 1222275 = | 266 (1.820) | 3 (0.020) | 3/242 | NT | 1.2% | coding (52/159 nt) | yjcZ | sporulation protein YjcZ |
| ? | NZ_CP034943 | = 1222271 | 255 (1.820) | coding (48/159 nt) | yjcZ | sporulation protein YjcZ | |||||
| * | ? | NZ_CP034943 | 166199 = | 228 (1.560) | 4 (0.030) +A |
3/244 | NT | 1.8% | intergenic (+4/‑168) | EO946_RS00985/EO946_RS00990 | tRNA‑Ala/16S ribosomal RNA |
| ? | NZ_CP034943 | = 171201 | 220 (1.540) | intergenic (+18/‑167) | rrf/EO946_RS01005 | 5S ribosomal RNA/16S ribosomal RNA | |||||