breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence	position	mutation	annotation	gene	description
RA	176,608	C→T	A373T (GCC→ACC)	hemL ←	glutamate‑1‑semialdehyde aminotransferase
RA	798,273	(A)7→6	coding (1003/1146 nt)	ECB_00739 ←	hypothetical protein
RA	1,163,310	A→C	intergenic (+50/‑18)	plsX → / → fabH	fatty acid/phospholipid synthesis protein/3‑oxoacyl‑(acyl carrier protein) synthase
RA	1,329,516	C→T	H33Y (CAC→TAC)	topA →	DNA topoisomerase I
JC	1,733,297	(CGTATGAA)1→2	coding (333/1413 nt)	pykF →	pyruvate kinase
RA	2,131,466	(A)9→8	intergenic (‑125/+175)	gatY ← / ← fbaB	D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase
RA	2,193,779	G→T	L143I (CTT→ATT)	yeiB ←	conserved inner membrane protein
RA	3,014,276	G→A	G286D (GGT→GAT)	ECB_02815 →	Capsule polysaccharide export inner‑membrane protein kpsE
RA	3,146,012	A→G	D50G (GAC→GGC)	rpoD →	RNA polymerase sigma factor
RA	3,251,892	G→A	P290L (CCG→CTG)	nusA ←	transcription elongation factor NusA
RA	3,328,582	C→A	A133S (GCT→TCT)	mreB ←	cell wall structural complex MreBCD, actin‑like component MreB
RA	3,497,639	A→G	F133L (TTC→CTC)	glgP ←	glycogen phosphorylase
RA	3,762,741	A→T	K662I (AAA→ATA)	spoT →	bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase
RA	3,875,632	(T)7→8	intergenic (‑66/+287)	glmU ← / ← atpC	bifunctional N‑acetylglucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyltransferase/F0F1 ATP synthase subunit epsilon
MC JC	3,894,997	Δ6,934 bp	IS150‑mediated	rbsD–[yieO]	rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO]
RA	3,911,991	(T)5→4	intergenic (‑192/‑131)	yifB ← / → ilvL	predicted bifunctional enzyme and transcriptional regulator/ilvG operon leader peptide
RA	4,163,752	T→A	I966N (ATC→AAC)	rpoB →	DNA‑directed RNA polymerase subunit beta
JC JC	4,524,522	IS186 (+) +6 bp	coding (494‑499/549 nt)	fimA →	major type 1 subunit fimbrin (pilin)