breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence	position	mutation	annotation	gene	description
RA	474,360	Δ1 bp	coding (946/1677 nt)	ybaL ←	predicted transporter with NAD(P)‑binding Rossmann‑fold domain
RA	795,321	(G)6→5	intergenic (+26/+16)	ECB_00736 → / ← ECB_00737	hypothetical protein/hypothetical protein
RA	1,305,477	Δ1 bp	coding (763/1461 nt)	cls ←	cardiolipin synthetase
RA	1,329,516	C→T	H33Y (CAC→TAC)	topA →	DNA topoisomerase I
RA	1,451,762	T→A	I144F (ATC→TTC)	acpD ←	acyl carrier protein phosphodiesterase
JC	1,733,297	(CGTATGAA)1→2	coding (333/1413 nt)	pykF →	pyruvate kinase
RA	2,193,779	G→T	L143I (CTT→ATT)	yeiB ←	conserved inner membrane protein
RA	2,359,374	T→C	F346L (TTC→CTC)	pta →	phosphate acetyltransferase
RA	3,292,285	A→G	K807E (AAG→GAG)	gltB →	glutamate synthase, large subunit
RA	3,497,693	C→T	E115K (GAA→AAA)	glgP ←	glycogen phosphorylase
RA	3,762,741	A→T	K662I (AAA→ATA)	spoT →	bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase
RA	3,875,632	(T)7→8	intergenic (‑66/+287)	glmU ← / ← atpC	bifunctional N‑acetylglucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyltransferase/F0F1 ATP synthase subunit epsilon
MC JC	3,894,997	Δ6,934 bp	IS150‑mediated	rbsD–[yieO]	rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO]
RA	3,928,938	A→T	Q241L (CAG→CTG)	rho →	transcription termination factor Rho
RA	4,202,619	Δ1 bp	intergenic (‑60/‑140)	iclR ← / → metH	DNA‑binding transcriptional repressor/B12‑dependent methionine synthase
RA	4,273,299	A→T	intergenic (+227/‑115)	nrfG → / → gltP	heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG/glutamate/aspartate:proton symporter
JC JC	4,524,522	IS186 (+) +6 bp	coding (494‑499/549 nt)	fimA →	major type 1 subunit fimbrin (pilin)