breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence	position	mutation	annotation	gene	description
RA	1,004,183	C→T	intergenic (‑109/+493)	ompF ← / ← asnS	outer membrane porin 1a (Ia;b;F)/asparaginyl‑tRNA synthetase
RA	1,305,211	Δ1 bp	coding (1029/1461 nt)	cls ←	cardiolipin synthetase
RA	1,329,516	C→T	H33Y (CAC→TAC)	topA →	DNA topoisomerase I
JC	1,733,297	(CGTATGAA)1→2	coding (333/1413 nt)	pykF →	pyruvate kinase
RA	2,131,466	(A)9→8	intergenic (‑125/+175)	gatY ← / ← fbaB	D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase
RA	2,193,779	G→T	L143I (CTT→ATT)	yeiB ←	conserved inner membrane protein
RA	3,498,010	G→A	S9L (TCG→TTG)	glgP ←	glycogen phosphorylase
RA	3,762,741	A→T	K662I (AAA→ATA)	spoT →	bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase
RA	3,875,632	(T)7→8	intergenic (‑66/+287)	glmU ← / ← atpC	bifunctional N‑acetylglucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyltransferase/F0F1 ATP synthase subunit epsilon
MC JC	3,894,997	Δ6,934 bp	IS150‑mediated	rbsD–[yieO]	rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO]
RA	3,914,929	C→T	S215F (TCC→TTC)	ilvE →	branched‑chain amino acid aminotransferase
RA	3,940,843	T→A	I148N (ATC→AAC)	wecF →	putative enterobacterial common antigen polymerase
JC	4,097,191	(CAACACT)1→2	coding (382/846 nt)	glpF ←	glycerol facilitator
RA	4,164,822	T→G	F1323V (TTC→GTC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	4,167,458	A→C	E833A (GAG→GCG)	rpoC →	DNA‑directed RNA polymerase subunit beta'
JC JC	4,524,522	IS186 (+) +6 bp	coding (494‑499/549 nt)	fimA →	major type 1 subunit fimbrin (pilin)