mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 41 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | = 4470814 | 177 (1.150) | 4 (0.030) | 3/374 | NT | 2.4% | coding (47/1422 nt) | treB | PTS trehalose transporter subunit IIBC |
| ? | NC_007779 | = 4470885 | 155 (1.030) | intergenic (‑25/+94) | treB/treR | PTS trehalose transporter subunit IIBC/trehalose operon repressor | |||||
| * | ? | NC_007779 | = 4338674 | 213 (1.380) | 4 (0.030) | 4/364 | NT | 2.1% | coding (1595/1644 nt) | eptA | phosphoethanolamine transferase EptA |
| ? | NC_007779 | = 4338916 | 177 (1.200) | coding (1353/1644 nt) | eptA | phosphoethanolamine transferase EptA | |||||
| * | ? | NC_007779 | = 4202504 | 110 (0.710) | 3 (0.020) | 3/358 | NT | 2.8% | intergenic (‑112/+18) | mscL/trkA | large‑conductance mechanosensitive channel protein MscL/Trk system potassium transporter TrkA |
| ? | NC_007779 | = 4202508 | 109 (0.750) | intergenic (‑116/+14) | mscL/trkA | large‑conductance mechanosensitive channel protein MscL/Trk system potassium transporter TrkA | |||||
| * | ? | NC_007779 | 3952802 = | 123 (0.800) | 4 (0.030) | 3/360 | NT | 2.9% | coding (1561/3474 nt) | bcsC | cellulose biosynthesis protein BcsC |
| ? | NC_007779 | 3953036 = | 150 (1.030) | coding (1795/3474 nt) | bcsC | cellulose biosynthesis protein BcsC | |||||
| * | ? | NC_007779 | = 3898201 | 174 (1.130) | 7 (0.050) | 3/356 | NT | 4.1% | coding (319/849 nt) | yiaJ | IclR family transcriptional regulator YiaJ |
| ? | NC_007779 | = 3898501 | 168 (1.170) | coding (619/849 nt) | yiaJ | IclR family transcriptional regulator YiaJ | |||||
| * | ? | NC_007779 | = 3772081 | 152 (0.990) | 3 (0.020) | 3/368 | NT | 1.9% | coding (979/1251 nt) | Y75_RS18705 | YidR family protein |
| ? | NC_007779 | = 3772088 | 160 (1.080) | coding (986/1251 nt) | Y75_RS18705 | YidR family protein | |||||
| * | ? | NC_007779 | 3759688 = | 181 (1.170) | 4 (0.030) | 4/362 | NT | 2.3% | coding (495/1074 nt) | recF | DNA replication/repair protein RecF |
| ? | NC_007779 | 3759770 = | 161 (1.100) | coding (577/1074 nt) | recF | DNA replication/repair protein RecF | |||||
| * | ? | NC_007779 | = 3629422 | 138 (0.900) | 4 (0.030) | 3/372 | NT | 2.6% | coding (1396/1830 nt) | recQ | ATP‑dependent DNA helicase RecQ |
| ? | NC_007779 | = 3629460 | 160 (1.070) | coding (1358/1830 nt) | recQ | ATP‑dependent DNA helicase RecQ | |||||
| * | ? | NC_007779 | 3506129 = | 80 (0.520) | 4 (0.030) | 4/364 | NT | 3.6% | coding (718/2433 nt) | Y75_RS17400 | bifunctional aspartate kinase/homoserine dehydrogenase II |
| ? | NC_007779 | 3506453 = | 140 (0.950) | coding (394/2433 nt) | Y75_RS17400 | bifunctional aspartate kinase/homoserine dehydrogenase II | |||||
| * | ? | NC_007779 | = 3094784 | 215 (1.390) | 4 (0.030) | 3/368 | NT | 2.0% | coding (309/567 nt) | yggT | osmotic shock tolerance protein YggT |
| ? | NC_007779 | = 3094936 | 193 (1.300) | coding (461/567 nt) | yggT | osmotic shock tolerance protein YggT | |||||