mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.32.0b
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 14 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3979974 | 56 (1.040) | 5 (0.100) | 5/268 | 6.6 | 8.9% | intergenic (‑607/+72) | aslA/hemY | putative Ser‑type periplasmic non‑aryl sulfatase/putative protoheme IX synthesis protein |
| ? | CP009273 | = 3979982 | 51 (1.020) | intergenic (‑615/+64) | aslA/hemY | putative Ser‑type periplasmic non‑aryl sulfatase/putative protoheme IX synthesis protein | |||||
| * | ? | CP009273 | 4155470 = | 69 (1.280) | 4 (0.080) | 4/272 | 7.3 | 5.9% | coding (115/858 nt) | murI | glutamate racemase |
| ? | CP009273 | 4155497 = | 64 (1.270) | coding (142/858 nt) | murI | glutamate racemase | |||||
| * | ? | CP009273 | 2902695 = | 54 (1.000) | 4 (0.080) | 4/280 | 7.4 | 6.8% | coding (331/1638 nt) | pyrG | CTP synthetase |
| ? | CP009273 | 2902717 = | 57 (1.100) | coding (309/1638 nt) | pyrG | CTP synthetase | |||||
| * | ? | CP009273 | = 504218 | 79 (1.470) | 3 (0.060) +AATGGTGCTCGGA |
3/264 | 7.7 | 4.0% | noncoding (181/236 nt) | REP48 (repetitive extragenic palindromic) element; contains 5 REP sequences | REP48 (repetitive extragenic palindromic) element; contains 5 REP sequences |
| ? | CP009273 | = 504274 | NA (NA) | intergenic (+259/+57) | ybaQ/copA | putative DNA‑binding transcriptional regulator/copper transporter | |||||
| * | ? | CP009273 | 1881072 = | 44 (0.820) | 3 (0.060) | 3/268 | 7.8 | 6.8% | intergenic (+5/+49) | yeaX/rnd | putative YeaWX dioxygenase beta subunit, reductase component/ribonuclease D |
| ? | CP009273 | 1881115 = | 41 (0.820) | intergenic (+48/+6) | yeaX/rnd | putative YeaWX dioxygenase beta subunit, reductase component/ribonuclease D | |||||
| * | ? | CP009273 | = 4051662 | 33 (0.610) | 4 (0.080) | 3/272 | 7.9 | 11.6% | intergenic (‑268/‑105) | glnA/typA | glutamine synthetase/GTP‑binding protein |
| ? | CP009273 | = 4051693 | 30 (0.590) | intergenic (‑299/‑74) | glnA/typA | glutamine synthetase/GTP‑binding protein | |||||
| * | ? | CP009273 | 1317644 = | 58 (1.080) | 3 (0.060) | 3/272 | 7.9 | 5.7% | coding (168/882 nt) | yciV | PHP domain protein |
| ? | CP009273 | 1317699 = | 44 (0.870) | coding (223/882 nt) | yciV | PHP domain protein | |||||
| * | ? | CP009273 | 993895 = | 64 (1.190) | 3 (0.060) | 3/272 | 7.9 | 4.8% | intergenic (+32/‑51) | elfA/elfD | laminin‑binding fimbrin subunit/putative periplasmic pilin chaperone |
| ? | CP009273 | 993917 = | 59 (1.170) | intergenic (+54/‑29) | elfA/elfD | laminin‑binding fimbrin subunit/putative periplasmic pilin chaperone | |||||
| * | ? | CP009273 | = 4227196 | 67 (1.240) | 3 (0.060) | 3/276 | 8.0 | 4.5% | coding (372/738 nt) | yjbG | extracellular polysaccharide export OMA protein |
| ? | CP009273 | = 4227200 | 64 (1.250) | coding (376/738 nt) | yjbG | extracellular polysaccharide export OMA protein | |||||
| * | ? | CP009273 | 910032 = | 63 (1.170) | 3 (0.060) | 3/278 | 8.0 | 4.9% | coding (282/900 nt) | ybjE | putative transporter |
| ? | CP009273 | 910077 = | 56 (1.080) | coding (237/900 nt) | ybjE | putative transporter | |||||