mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.32.0 revision 6ff6de7d1b87
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 23 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1292389 = | 47 (0.940) | 5 (0.110) | 5/264 | 6.2 | 10.2% | intergenic (+24/+120) | galU/hns | glucose‑1‑phosphate uridylyltransferase/global DNA‑binding transcriptional dual regulator H‑NS |
| ? | NC_000913 | 1292417 = | 44 (0.940) | intergenic (+52/+92) | galU/hns | glucose‑1‑phosphate uridylyltransferase/global DNA‑binding transcriptional dual regulator H‑NS | |||||
| * | ? | NC_000913 | 1428170 = | 37 (0.740) | 4 (0.080) | 4/268 | 6.9 | 10.0% | coding (557/981 nt) | insH1 | IS5 transposase and trans‑activator |
| ? | NC_000913 | 1428204 = | 37 (0.780) | coding (523/981 nt) | insH1 | IS5 transposase and trans‑activator | |||||
| * | ? | NC_000913 | = 1396661 | NA (NA) | 4 (0.080) | 4/268 | 6.9 | 9.7% | coding (586/1017 nt) | insH1 | IS5 transposase and trans‑activator |
| ? | NC_000913 | 1428197 = | 39 (0.780) | coding (530/981 nt) | insH1 | IS5 transposase and trans‑activator | |||||
| * | ? | NC_000913 | = 1396634 | NA (NA) | 4 (0.080) | 4/268 | 6.9 | 10.2% | coding (559/1017 nt) | insH1 | IS5 transposase and trans‑activator |
| ? | NC_000913 | 1428170 = | 37 (0.740) | coding (557/981 nt) | insH1 | IS5 transposase and trans‑activator | |||||
| * | ? | NC_000913 | 274525 = | NA (NA) | 4 (0.080) | 4/268 | 6.9 | NA | coding (593/1017 nt) | insH1 | IS5 transposase and trans‑activator |
| ? | NC_000913 | 274559 = | NA (NA) | coding (559/1017 nt) | insH1 | IS5 transposase and trans‑activator | |||||
| * | ? | NC_000913 | 732888 = | 38 (0.760) | 4 (0.080) | 4/274 | 7.0 | 9.8% | coding (3306/4194 nt) | rhsC | Rhs protein with putative toxin domain, putative neighboring cell growth inhibitor |
| ? | NC_000913 | 3622465 = | NA (NA) | coding (3275/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain, putative neighboring cell growth inhibitor | |||||
| * | ? | NC_000913 | 732888 = | 38 (0.760) | 4 (0.080) | 4/274 | 7.0 | 9.6% | coding (3306/4194 nt) | rhsC | Rhs protein with putative toxin domain, putative neighboring cell growth inhibitor |
| ? | NC_000913 | 734728 = | 38 (0.780) | pseudogene (596/1521 nt) | rhsO | pseudogene, Rhs family | |||||
| * | ? | NC_000913 | 3305902 = | 52 (1.040) | 3 (0.060) | 3/264 | 7.4 | 6.1% | intergenic (‑87/+67) | mtr/deaD | tryptophan transporter of high affinity/ATP‑dependent RNA helicase |
| ? | NC_000913 | 3305927 = | 43 (0.920) | intergenic (‑112/+42) | mtr/deaD | tryptophan transporter of high affinity/ATP‑dependent RNA helicase | |||||
| * | ? | NC_000913 | = 2144164 | 44 (0.880) | 4 (0.090) | 3/264 | 7.4 | 8.8% | coding (899/3318 nt) | yegE | putative diguanylate cyclase |
| ? | NC_000913 | = 2144173 | 42 (0.900) | coding (908/3318 nt) | yegE | putative diguanylate cyclase | |||||
| * | ? | NC_000913 | = 404794 | 39 (0.780) | 4 (0.090) | 3/264 | 7.4 | 8.7% | coding (1092/1116 nt) | yaiC | diguanylate cyclase, cellulose regualtor |
| ? | NC_000913 | = 404817 | 47 (1.000) | coding (1115/1116 nt) | yaiC | diguanylate cyclase, cellulose regualtor | |||||