mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 91 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4638136 = | 181 (0.900) | 4 (0.020) | 4/264 | NT | 2.3% | intergenic (+16/‑42) | creC/creD | sensory histidine kinase in two‑component regulatory system with CreB or PhoB/inner membrane protein |
| ? | NC_000913 | 4638182 = | 176 (0.950) | coding (5/1353 nt) | creD | inner membrane protein | |||||
| * | ? | NC_000913 | = 4583137 | 191 (0.950) | 6 (0.030) | 5/274 | NT | 3.2% | intergenic (‑89/+112) | hsdM/hsdR | DNA methyltransferase M/endonuclease R Type I restriction enzyme |
| ? | NC_000913 | = 4583224 | 180 (0.940) | intergenic (‑176/+25) | hsdM/hsdR | DNA methyltransferase M/endonuclease R Type I restriction enzyme | |||||
| * | ? | NC_000913 | 4542682 = | 108 (0.540) | 3 (0.020) | 3/268 | NT | 2.3% | intergenic (+49/‑433) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) |
| ? | NC_000913 | 4542996 = | 156 (0.830) | intergenic (+363/‑119) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) | |||||
| * | ? | NC_000913 | = 4513364 | 181 (0.900) | 6 (0.030) | 5/272 | NT | 3.3% | coding (46/999 nt) | fecC | ferric citrate ABC transporter permease |
| ? | NC_000913 | = 4513381 | 177 (0.930) | coding (29/999 nt) | fecC | ferric citrate ABC transporter permease | |||||
| * | ? | NC_000913 | 4396901 = | 198 (0.990) | 3 (0.020) | 3/274 | NT | 1.5% | coding (837/1338 nt) | amiB | N‑acetylmuramoyl‑l‑alanine amidase II |
| ? | NC_000913 | 4396939 = | 197 (1.030) | coding (875/1338 nt) | amiB | N‑acetylmuramoyl‑l‑alanine amidase II | |||||
| * | ? | NC_000913 | = 4066065 | 175 (0.870) | 4 (0.020) | 4/276 | NT | 2.2% | coding (1130/1386 nt) | yihP | putative 2,3‑dihydroxypropane‑1‑sulphonate exporter, membrane protein |
| ? | NC_000913 | = 4066091 | 180 (0.930) | coding (1104/1386 nt) | yihP | putative 2,3‑dihydroxypropane‑1‑sulphonate exporter, membrane protein | |||||
| * | ? | NC_000913 | 4064194 = | 158 (0.790) | 4 (0.020) | 4/272 | NT | 2.6% | coding (102/693 nt) | ompL | outer membrane porin L; putative sulpholipid porin |
| ? | NC_000913 | 4064216 = | 145 (0.760) | coding (80/693 nt) | ompL | outer membrane porin L; putative sulpholipid porin | |||||
| * | ? | NC_000913 | = 4024564 | 199 (0.990) | 4 (0.020) | 4/272 | NT | 2.0% | coding (258/489 nt) | rfaH | transcription antitermination protein |
| ? | NC_000913 | = 4024614 | 200 (1.050) | coding (208/489 nt) | rfaH | transcription antitermination protein | |||||
| * | ? | NC_000913 | 3950444 = | 213 (1.060) | 8 (0.040) | 7/272 | NT | 3.7% | intergenic (+24/‑63) | ilvL/ilvX | ilvG operon leader peptide/uncharacterized protein |
| ? | NC_000913 | 3950470 = | 211 (1.110) | intergenic (+50/‑37) | ilvL/ilvX | ilvG operon leader peptide/uncharacterized protein | |||||
| * | ? | NC_000913 | = 3869187 | 207 (1.030) | 4 (0.020) | 3/274 | NT | 2.0% | coding (123/1248 nt) | yidR | DUF3748 family protein |
| ? | NC_000913 | = 3869215 | 203 (1.060) | coding (95/1248 nt) | yidR | DUF3748 family protein | |||||