mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 323 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4636330 | 150 (1.010) | 16 (0.120) | 8/164 | NT | 10.1% | coding (324/690 nt) | creB | response regulator in two‑component regulatory system with CreC |
| ? | NC_000913 | = 4636367 | 147 (1.070) | coding (361/690 nt) | creB | response regulator in two‑component regulatory system with CreC | |||||
| * | ? | NC_000913 | = 4633268 | NA (NA) | 11 (0.080) | 9/164 | NT | 6.7% | coding (478/513 nt) | yjjX | non‑canonical purine NTP phosphatase, ITPase/XTPase |
| ? | NC_000913 | = 4633290 | 152 (1.110) | coding (456/513 nt) | yjjX | non‑canonical purine NTP phosphatase, ITPase/XTPase | |||||
| * | ? | NC_000913 | 4633257 = | 160 (1.070) | 21 (0.150) | 11/170 | NT | 12.1% | coding (489/513 nt) | yjjX | non‑canonical purine NTP phosphatase, ITPase/XTPase |
| ? | NC_000913 | 4633302 = | 153 (1.080) | coding (444/513 nt) | yjjX | non‑canonical purine NTP phosphatase, ITPase/XTPase | |||||
| * | ? | NC_000913 | 4627662 = | 173 (1.160) | 22 (0.150) | 8/170 | NT | 12.0% | coding (348/1233 nt) | nadR | trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor |
| ? | NC_000913 | 4627688 = | 158 (1.110) | coding (374/1233 nt) | nadR | trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor | |||||
| * | ? | NC_000913 | = 4606703 | 190 (1.280) | 18 (0.130) | 9/168 | NT | 8.8% | coding (998/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent |
| ? | NC_000913 | = 4606716 | 194 (1.380) | coding (985/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent | |||||
| * | ? | NC_000913 | 4602596 = | 155 (1.040) | 8 (0.060) | 4/168 | NT | 5.2% | coding (263/771 nt) | yjjP | DUF1212 family inner membrane protein |
| ? | NC_000913 | 4602621 = | 146 (1.040) | coding (238/771 nt) | yjjP | DUF1212 family inner membrane protein | |||||
| * | ? | NC_000913 | = 4602165 | 157 (1.050) | 16 (0.120) | 10/164 | NT | 10.0% | coding (694/771 nt) | yjjP | DUF1212 family inner membrane protein |
| ? | NC_000913 | = 4602178 | 142 (1.040) | coding (681/771 nt) | yjjP | DUF1212 family inner membrane protein | |||||
| * | ? | NC_000913 | = 4586789 | 176 (1.180) | 11 (0.080) | 8/166 | NT | 6.3% | intergenic (‑28/‑160) | hsdR/mrr | endonuclease R Type I restriction enzyme/methylated adenine and cytosine restriction protein |
| ? | NC_000913 | = 4586802 | 165 (1.190) | intergenic (‑41/‑147) | hsdR/mrr | endonuclease R Type I restriction enzyme/methylated adenine and cytosine restriction protein | |||||
| * | ? | NC_000913 | = 4558313 | 158 (1.060) | 9 (0.070) | 7/154 | NT | 6.1% | intergenic (‑24/+41) | hypT/iadA | hypochlorite‑responsive transcription factor/isoaspartyl dipeptidase |
| ? | NC_000913 | = 4558336 | 141 (1.100) | intergenic (‑47/+18) | hypT/iadA | hypochlorite‑responsive transcription factor/isoaspartyl dipeptidase | |||||
| * | ? | NC_000913 | 4557049 = | 170 (1.140) | 14 (0.100) | 7/162 | NT | 8.5% | coding (57/393 nt) | iraD | RpoS stabilzer after DNA damage, anti‑RssB factor |
| ? | NC_000913 | 4557077 = | 147 (1.090) | coding (85/393 nt) | iraD | RpoS stabilzer after DNA damage, anti‑RssB factor | |||||