mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 1141 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4636885 | 81 (0.740) | 8 (0.080) | 7/168 | NT | 9.0% | coding (190/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB |
| ? | NC_000913 | = 4636902 | 85 (0.830) | coding (207/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB | |||||
| * | ? | NC_000913 | = 4636368 | 100 (0.920) | 5 (0.050) | 3/166 | NT | 4.9% | coding (362/690 nt) | creB | response regulator in two‑component regulatory system with CreC |
| ? | NC_000913 | = 4636382 | 100 (0.980) | coding (376/690 nt) | creB | response regulator in two‑component regulatory system with CreC | |||||
| * | ? | NC_000913 | = 4627892 | 77 (0.710) | 4 (0.040) | 4/164 | NT | 4.7% | coding (578/1233 nt) | nadR | trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor |
| ? | NC_000913 | = 4627903 | 91 (0.910) | coding (589/1233 nt) | nadR | trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor | |||||
| * | ? | NC_000913 | = 4623777 | 101 (0.930) | 4 (0.040) | 4/164 | NT | 4.0% | coding (341/1017 nt) | lplA | lipoate‑protein ligase A |
| ? | NC_000913 | = 4623789 | 101 (1.010) | coding (329/1017 nt) | lplA | lipoate‑protein ligase A | |||||
| * | ? | NC_000913 | 4618029 = | 110 (1.010) | 5 (0.050) | 4/166 | NT | 4.9% | coding (707/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked |
| ? | NC_000913 | 4618065 = | 92 (0.910) | coding (743/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked | |||||
| * | ? | NC_000913 | 4614132 = | 105 (0.960) | 4 (0.040) | 4/160 | NT | 4.2% | coding (652/780 nt) | yjjV | putative DNase |
| ? | NC_000913 | 4614163 = | 88 (0.900) | coding (683/780 nt) | yjjV | putative DNase | |||||
| * | ? | NC_000913 | = 4609567 | 99 (0.910) | 6 (0.060) | 5/170 | NT | 5.8% | coding (154/1590 nt) | prfC | peptide chain release factor RF‑3 |
| ? | NC_000913 | = 4609591 | 101 (0.970) | coding (178/1590 nt) | prfC | peptide chain release factor RF‑3 | |||||
| * | ? | NC_000913 | = 4607578 | 99 (0.910) | 8 (0.080) | 5/172 | NT | 8.1% | coding (123/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent |
| ? | NC_000913 | = 4607601 | 86 (0.820) | coding (100/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent | |||||
| * | ? | NC_000913 | = 4607047 | 127 (1.170) | 9 (0.090) | 8/168 | NT | 7.4% | coding (654/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent |
| ? | NC_000913 | = 4607088 | 106 (1.030) | coding (613/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent | |||||
| * | ? | NC_000913 | = 4606703 | 121 (1.110) | 12 (0.120) | 5/168 | NT | 9.5% | coding (998/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent |
| ? | NC_000913 | = 4606716 | 114 (1.110) | coding (985/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent | |||||