mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 1204 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4639801 = | 149 (1.210) | 7 (0.060) | 5/166 | NT | 5.1% | coding (506/717 nt) | arcA | response regulator in two‑component regulatory system with ArcB or CpxA |
| ? | NC_000913 | 4639844 = | 122 (1.060) | coding (463/717 nt) | arcA | response regulator in two‑component regulatory system with ArcB or CpxA | |||||
| * | ? | NC_000913 | = 4638329 | 98 (0.790) | 6 (0.050) | 5/168 | NT | 5.8% | coding (152/1353 nt) | creD | inner membrane protein |
| ? | NC_000913 | = 4638348 | 104 (0.890) | coding (171/1353 nt) | creD | inner membrane protein | |||||
| * | ? | NC_000913 | = 4638146 | 108 (0.880) | 9 (0.080) | 8/156 | NT | 7.7% | intergenic (+26/‑32) | creC/creD | sensory histidine kinase in two‑component regulatory system with CreB or PhoB/inner membrane protein |
| ? | NC_000913 | = 4638170 | 122 (1.130) | intergenic (+50/‑8) | creC/creD | sensory histidine kinase in two‑component regulatory system with CreB or PhoB/inner membrane protein | |||||
| * | ? | NC_000913 | = 4636885 | 107 (0.870) | 12 (0.100) | 6/168 | NT | 10.4% | coding (190/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB |
| ? | NC_000913 | = 4636902 | 105 (0.900) | coding (207/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB | |||||
| * | ? | NC_000913 | 4629461 = | 133 (1.080) | 5 (0.040) | 5/162 | NT | 4.0% | coding (1062/1668 nt) | ettA | energy‑dependent translational throttle A |
| ? | NC_000913 | 4629489 = | 122 (1.090) | coding (1034/1668 nt) | ettA | energy‑dependent translational throttle A | |||||
| * | ? | NC_000913 | = 4623777 | 137 (1.110) | 10 (0.090) | 6/164 | NT | 7.2% | coding (341/1017 nt) | lplA | lipoate‑protein ligase A |
| ? | NC_000913 | = 4623789 | 133 (1.170) | coding (329/1017 nt) | lplA | lipoate‑protein ligase A | |||||
| * | ? | NC_000913 | 4615433 = | 130 (1.050) | 9 (0.080) | 8/158 | NT | 7.8% | coding (111/864 nt) | yjjW | putative pyruvate formate lyase activating enzyme |
| ? | NC_000913 | 4615467 = | 99 (0.910) | coding (77/864 nt) | yjjW | putative pyruvate formate lyase activating enzyme | |||||
| * | ? | NC_000913 | 4614132 = | 134 (1.090) | 5 (0.050) | 4/160 | NT | 4.1% | coding (652/780 nt) | yjjV | putative DNase |
| ? | NC_000913 | 4614163 = | 111 (1.000) | coding (683/780 nt) | yjjV | putative DNase | |||||
| * | ? | NC_000913 | 4602159 = | 109 (0.880) | 10 (0.090) | 4/164 | NT | 9.4% | coding (700/771 nt) | yjjP | DUF1212 family inner membrane protein |
| ? | NC_000913 | 4602186 = | 93 (0.820) | coding (673/771 nt) | yjjP | DUF1212 family inner membrane protein | |||||
| * | ? | NC_000913 | 4599652 = | 116 (0.940) | 6 (0.050) | 6/164 | NT | 5.6% | intergenic (‑211/+43) | opgB/yjjA | OPG periplasmic biosynthetic phosphoglycerol transferases I (membrane‑bound) and II (soluble)/putative DUF2501 family periplasmic protein |
| ? | NC_000913 | 4599685 = | 96 (0.850) | intergenic (‑244/+10) | opgB/yjjA | OPG periplasmic biosynthetic phosphoglycerol transferases I (membrane‑bound) and II (soluble)/putative DUF2501 family periplasmic protein | |||||