mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 15 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_pgi | 4249656 = | 807 (15.230) | 3 (0.060) | 3/258 | NT | 0.40% | coding (843/921 nt) | malM | maltose regulon periplasmic protein |
| ? | NC_000913_3_pae_pgi | 4249717 = | 722 (14.270) | coding (904/921 nt) | malM | maltose regulon periplasmic protein | |||||
| * | ? | NC_000913_3_pae_pgi | 4240001 = | 988 (18.650) | 4 (0.080) | 4/250 | NT | 0.44% | intergenic (+6/+38) | psiE/xylE | phosphate starvation inducible protein/D‑xylose transporter |
| ? | NC_000913_3_pae_pgi | 4240029 = | 888 (18.110) | intergenic (+34/+10) | psiE/xylE | phosphate starvation inducible protein/D‑xylose transporter | |||||
| * | ? | NC_000913_3_pae_pgi | = 4239999 | 987 (18.630) | 5 (0.090) | 4/270 | NT | 0.53% | intergenic (+4/+40) | psiE/xylE | phosphate starvation inducible protein/D‑xylose transporter |
| ? | NC_000913_3_pae_pgi | = 4240029 | 907 (17.120) | intergenic (+34/+10) | psiE/xylE | phosphate starvation inducible protein/D‑xylose transporter | |||||
| * | ? | NC_000913_3_pae_pgi | = 4239010 | 942 (17.780) | 4 (0.080) | 3/248 | NT | 0.46% | intergenic (+20/+27) | yjbH/yjbT | DUF940 family extracellular polysaccharide protein/putative periplasmic protein |
| ? | NC_000913_3_pae_pgi | = 4239020 | 869 (17.870) | intergenic (+30/+17) | yjbH/yjbT | DUF940 family extracellular polysaccharide protein/putative periplasmic protein | |||||
| * | ? | NC_000913_3_pae_pgi | 4239000 = | 933 (17.610) | 4 (0.080) | 4/248 | NT | 0.46% | intergenic (+10/+37) | yjbH/yjbT | DUF940 family extracellular polysaccharide protein/putative periplasmic protein |
| ? | NC_000913_3_pae_pgi | 4239032 = | 869 (17.870) | intergenic (+42/+5) | yjbH/yjbT | DUF940 family extracellular polysaccharide protein/putative periplasmic protein | |||||
| * | ? | NC_000913_3_pae_pgi | = 4236696 | 1044 (19.710) | 3 (0.060) | 3/260 | NT | 0.30% | coding (540/738 nt) | yjbG | extracellular polysaccharide export OMA protein |
| ? | NC_000913_3_pae_pgi | = 4236732 | 1003 (19.670) | coding (576/738 nt) | yjbG | extracellular polysaccharide export OMA protein | |||||
| * | ? | NC_000913_3_pae_pgi | = 4236302 | 888 (16.760) | 3 (0.060) | 3/260 | NT | 0.34% | coding (146/738 nt) | yjbG | extracellular polysaccharide export OMA protein |
| ? | NC_000913_3_pae_pgi | = 4236324 | 894 (17.530) | coding (168/738 nt) | yjbG | extracellular polysaccharide export OMA protein | |||||
| * | ? | NC_000913_3_pae_pgi | 4235476 = | 1079 (20.370) | 8 (0.160) | 7/250 | NT | 0.81% | intergenic (+68/‑46) | yjbE/yjbF | extracellular polysaccharide production threonine‑rich protein/extracellular polysaccharide production lipoprotein |
| ? | NC_000913_3_pae_pgi | 4235500 = | 964 (19.660) | intergenic (+92/‑22) | yjbE/yjbF | extracellular polysaccharide production threonine‑rich protein/extracellular polysaccharide production lipoprotein | |||||
| * | ? | NC_000913_3_pae_pgi | 4228725 = | 946 (17.860) | 4 (0.080) | 4/260 | NT | 0.45% | coding (995/1632 nt) | yjbB | putative Na+/Pi‑cotransporter |
| ? | NC_000913_3_pae_pgi | 4228767 = | 849 (16.650) | coding (1037/1632 nt) | yjbB | putative Na+/Pi‑cotransporter | |||||
| * | ? | NC_000913_3_pae_pgi | = 4226596 | 881 (16.630) | 3 (0.060) | 3/256 | NT | 0.35% | coding (2769/3684 nt) | metH | homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent |
| ? | NC_000913_3_pae_pgi | = 4226613 | 873 (17.390) | coding (2786/3684 nt) | metH | homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent | |||||