breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Marginal new junction evidence (sorted from low to high skew)
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	USA300TCH1516_ALE	2660570 =	106 (1.170)	3 (0.040)	3/236	NT	3.0%	intergenic (+12/+237)	ldhD_1/ybiV	D‑lactate dehydrogenase/Sugar phosphatase YbiV
	?	USA300TCH1516_ALE	2660603 =	96 (1.170)					intergenic (+45/+204)	ldhD_1/ybiV	D‑lactate dehydrogenase/Sugar phosphatase YbiV
*	?	USA300TCH1516_ALE	= 2085309	67 (0.740)	3 (0.040)	3/232	NT	4.1%	coding (186/201 nt)	hlb_1	Phospholipase C
	?	USA300TCH1516_ALE	2128358 =	80 (0.990)					coding (16/825 nt)	hlb_2	Phospholipase C
*	?	NC_012417	1976 =	1437 (0.990)	4 (0.000)	3/246	NT	0.31%	intergenic (+209/+117)	USA300HOU_RS14895/USA300HOU_RS14900	hypothetical protein/hypothetical protein
	?	NC_012417	2035 =	1183 (0.860)					intergenic (+268/+58)	USA300HOU_RS14895/USA300HOU_RS14900	hypothetical protein/hypothetical protein
*	?	NC_012417	1964 =	1499 (1.030)	6 (0.000)	4/238	NT	0.49%	intergenic (+197/+129)	USA300HOU_RS14895/USA300HOU_RS14900	hypothetical protein/hypothetical protein
	?	NC_012417	2053 =	1089 (0.820)					intergenic (+286/+40)	USA300HOU_RS14895/USA300HOU_RS14900	hypothetical protein/hypothetical protein