Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I53 R1
|
229 |
158.0 |
8090706 |
91.1% |
7370633 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,044,628 |
A→C |
K323Q (AAG→CAG) |
bglA → |
6‑phospho‑beta‑glucosidase A |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,044,628 | 0 | A | C | 96.0%
| 493.3
/ 8.1
| 150 | K323Q (AAG→CAG) | bglA | 6‑phospho‑beta‑glucosidase A |
| Reads supporting (aligned to +/- strand): ref base A (3/3); new base C (50/94); total (53/97) |
| Fisher's exact test for biased strand distribution p-value = 6.66e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.07e-01 |
Only 100 of 154 total aligned reads displayed.
CGGATTTAACATCAAAATGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGAAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTGACTGGGGCTGGCAGATTGATC > NC_000913/3044531‑3044724
|
cgGATTTAACATCAAAATGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAAtgcagtgcag > 2:1632823/1‑100 (MQ=255)
cgGATTTAACATCAAAATGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAAtgcagtgcag < 1:4026059/100‑1 (MQ=255)
ggATTTAACATCAAAATGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAgg < 2:204381/100‑1 (MQ=255)
gATTTAACATCAAAATGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGc < 1:1535774/100‑1 (MQ=255)
aTTTAACATCAAAATGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGcc < 1:3824516/100‑1 (MQ=255)
aTTTAACATCAAAATGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGcc < 2:1184865/100‑1 (MQ=255)
tttAACATCAAAATGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCg < 2:3328582/100‑1 (MQ=255)
aaCATCAAAATGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAg > 1:1774049/1‑100 (MQ=255)
aaCATCAAAATGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAg < 2:3842584/100‑1 (MQ=255)
aCATCAAAATGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAgg > 1:2877494/1‑100 (MQ=255)
cATCAAAATGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAggc > 2:2679009/1‑100 (MQ=255)
cATCAAAATGGAAGACGGCGATCGGGATGTGCTGTGTGAAGGCACCTGCGATGATCTTGGTTTCAGCGATTACATGACCAATGCAGTGCAGGCCGAAggc > 2:3024787/1‑100 (MQ=255)
aTCAAAATGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAggcg > 2:2481170/1‑100 (MQ=255)
aTCAAAATGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAggcg > 1:1344588/1‑100 (MQ=255)
aTCAAAATGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATAACCAATGCAGTGCAGGCCGAAggcg < 2:1218391/100‑1 (MQ=255)
tCAAAATGGAAGACGGCGATCTGGATGTGCGGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAggcgg > 2:280664/1‑100 (MQ=255)
tCAAAAGGGAAGACGGCGATCTGGATGTGCGGCGTGGAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAggcgg < 1:3836989/100‑1 (MQ=255)
cAAAATGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGAAGGCCGAAggcggc < 2:157509/100‑1 (MQ=255)
aaaaTGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCa < 2:1988011/100‑1 (MQ=255)
aaTGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCAcc < 1:2652336/100‑1 (MQ=255)
tGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCgg > 2:1016216/1‑100 (MQ=255)
tGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCgg < 2:732045/100‑1 (MQ=255)
ggAAGACGGCGATCTGGATGTACTGCCTGAAGGCACCTGTGATTATCTTGGTTTCAGCTATTACATGACCGATGCAGTGCAGGCCGAAGGCGGCACCGgc < 1:3809081/100‑1 (MQ=255)
gAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGgcg > 2:3473872/1‑100 (MQ=255)
aGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGgcgat < 2:10767/100‑1 (MQ=255)
gACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGgcgatg < 2:121578/100‑1 (MQ=255)
gACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGgcgatg < 2:3403998/100‑1 (MQ=255)
cGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGgcgatgcg > 1:1255493/1‑100 (MQ=255)
cGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGgcgatgcg < 1:3680675/100‑1 (MQ=255)
gCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGgcgatgcgat < 1:1487833/100‑1 (MQ=255)
gCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGAAGGCCGAAGGCGGCACCGgcgatgcgat < 2:726055/100‑1 (MQ=255)
cGATCTGGATGTGCTGCGTGCAGGCACCTGCGATTATCTTGGTTTCAGCTATTACCTGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGAtc < 2:800085/100‑1 (MQ=255)
cGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGAtc > 1:474822/1‑100 (MQ=255)
gATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGAtct < 1:1223848/100‑1 (MQ=255)
aTCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGAtctc < 2:1812771/100‑1 (MQ=255)
cTGGATGTGCTGCGTGAAGGCACCTGCGTTTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCTCCGGCGATGCGATCTCTg > 2:1144697/1‑100 (MQ=255)
cTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTg < 1:2375289/100‑1 (MQ=255)
tGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTgg < 1:1527984/100‑1 (MQ=255)
ggATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGt > 2:2282854/1‑100 (MQ=255)
aTGTGCTGCGTGAAGGGACTTGCGATTGTCTTGGTTTCAGGTAGTACATGACCAATGTTGTGCAGGCCGAAGGGGGCACCGGCGATGCGATCTCTGGttt < 2:1352347/100‑1 (MQ=255)
aTGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGttt < 1:3722793/100‑1 (MQ=255)
gtgCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTg < 1:1693322/100‑1 (MQ=255)
gttgcGTGAAGGAATCAGCGATTATCTTGGTTTCAGCTATTACATGACCTATGCAGTGCAGCCCGAAGGCGGCGCCGGGGATGCGATCTCTGGTTTTTaa < 2:1696105/98‑1 (MQ=255)
gctgcGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGCAGGCGGCACCGGCGATGCGATCTCTGGTTTTGaa > 2:2364754/1‑100 (MQ=255)
ctgcGTGAAGGCACCTGCGATTATCTTGGTTTCTGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAg < 1:4040740/100‑1 (MQ=255)
ctgcGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGAAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAg > 1:3952579/1‑100 (MQ=255)
ctgcGTGAAGGCACCTGCCACTATCTCGGTTTCAGCTATGACATGGCCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAg < 1:3821083/100‑1 (MQ=255)
tgcGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTCCATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAgg < 2:2004001/100‑1 (MQ=255)
gcGTGAACGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGc < 1:2020350/100‑1 (MQ=255)
cGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCa < 1:1795878/100‑1 (MQ=255)
gTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAg < 2:3246547/100‑1 (MQ=255)
gTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAg > 2:932404/1‑100 (MQ=255)
gTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAg < 1:998928/100‑1 (MQ=255)
gAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCg > 2:425293/1‑100 (MQ=255)
aaGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGt > 2:2104613/1‑100 (MQ=255)
ggCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTAc < 1:1215830/100‑1 (MQ=255)
ggCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTAc > 1:1559520/1‑100 (MQ=255)
ggCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTAc < 1:3520471/100‑1 (MQ=255)
gCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTAcc < 1:1959894/100‑1 (MQ=255)
gCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTAcc < 1:3433125/100‑1 (MQ=255)
cACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGAAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCa > 1:2635686/1‑100 (MQ=255)
ccTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCaaa > 1:2050347/1‑100 (MQ=255)
ccTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCaaa > 1:297382/1‑100 (MQ=255)
cTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAAc < 1:1631787/100‑1 (MQ=255)
tGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAAcc < 2:1445763/100‑1 (MQ=255)
tGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAAcc > 1:2848642/1‑100 (MQ=255)
cGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCg > 1:1498961/1‑100 (MQ=255)
ttATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTAt < 2:1532962/100‑1 (MQ=255)
ttATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTAt < 1:2357153/100‑1 (MQ=255)
ttATCTTGGTTTCAGCTATGACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTAt < 2:1797193/100‑1 (MQ=255)
tATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATg > 1:703858/1‑100 (MQ=255)
tATCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATg < 2:1396905/100‑1 (MQ=255)
aTCTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGt > 1:2055647/1‑100 (MQ=255)
cTTGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTa < 1:3081413/100‑1 (MQ=255)
tGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTaaa > 2:287638/1‑100 (MQ=255)
tGGTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTaaa > 2:2547277/1‑100 (MQ=255)
ggTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAg < 2:1109626/100‑1 (MQ=255)
ggTTTCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAg < 2:803971/100‑1 (MQ=255)
tttCAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCa < 2:225643/100‑1 (MQ=255)
cAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCt < 2:2431462/100‑1 (MQ=255)
cAGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCt < 1:2419602/100‑1 (MQ=255)
aGCTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTg < 1:931531/100‑1 (MQ=255)
cTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTGAc < 1:1955902/100‑1 (MQ=255)
cTATTACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTGAc < 1:1897714/100‑1 (MQ=255)
ttACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTGACTgg > 1:1446690/1‑100 (MQ=255)
ttACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTGACTgg < 1:1447019/100‑1 (MQ=255)
tACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAATGCAGCGTACCAAACCCGTATGTTAAAGCATCTGACTggg < 2:3435517/100‑1 (MQ=255)
tACATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTGACTggg < 2:3508876/100‑1 (MQ=255)
aCATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTGACTgggg > 1:2229845/1‑100 (MQ=255)
aCATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTGACTgggg < 1:885980/100‑1 (MQ=255)
aCATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTGACTgggg > 2:2527122/1‑100 (MQ=255)
cATGACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTGACTGGGGc < 1:2172352/100‑1 (MQ=255)
gACCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTGACTGGGGCTgg > 1:2600809/1‑100 (MQ=255)
aCCAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTGACTGGGGCTGGc < 2:689126/100‑1 (MQ=255)
ccAATGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTGACTGGGGCTGGCa < 1:1605879/100‑1 (MQ=255)
aTGCAGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTGACTGGGGCTGGCAGAt < 1:1565759/100‑1 (MQ=255)
aGTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTGACTGGGGCTGGCAGATTGAt < 1:2582458/100‑1 (MQ=255)
gTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTGACTGGGGCTGGCAGATTGATc > 1:455138/1‑100 (MQ=255)
gTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTGACTGGGGCTGGCAGATTGATc < 2:295241/100‑1 (MQ=255)
gTGCAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTGACTGGGGCTGGCAGATTGATc > 2:2734494/1‑100 (MQ=255)
|
CGGATTTAACATCAAAATGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGAAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTGACTGGGGCTGGCAGATTGATC > NC_000913/3044531‑3044724
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
