Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A14 F129 I0 R1
|
205 |
159.3 |
7901478 |
93.8% |
7411586 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,196,331 |
C→G |
100% |
intergenic (‑232/+1) |
thiC ← / ← rsd |
phosphomethylpyrimidine synthase/stationary phase protein, binds sigma 70 RNA polymerase subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,196,331 | 0 | C | G | 95.6%
| 627.5
/ 13.2
| 180 | intergenic (‑232/+1) | thiC/rsd | phosphomethylpyrimidine synthase/stationary phase protein, binds sigma 70 RNA polymerase subunit |
| Reads supporting (aligned to +/- strand): ref base C (4/4); new base G (82/90); total (86/94) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 |
Only 100 of 181 total aligned reads displayed.
GATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTCAG > NC_000913/4196232‑4196426
|
gATCCCGAATAAACGGTCTCAGCCAGTTAAGGTACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAc < 1:53104/100‑1 (MQ=255)
cccGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCa < 2:3707594/100‑1 (MQ=255)
ccGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCaa > 1:1544689/1‑100 (MQ=255)
ccGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCaa > 1:1498988/1‑100 (MQ=255)
cGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAg < 1:2784978/100‑1 (MQ=255)
cGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAg > 1:1129949/1‑100 (MQ=255)
cGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAg < 2:1722565/100‑1 (MQ=255)
aaaCGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGa > 2:1990260/1‑100 (MQ=255)
aaaCGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGa < 2:85090/100‑1 (MQ=255)
aaCGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGAt > 1:2756734/1‑100 (MQ=255)
aaCGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGAt > 1:3641550/1‑100 (MQ=255)
cGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGt < 1:2346722/100‑1 (MQ=255)
cGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGt < 2:3776963/100‑1 (MQ=255)
gTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGttt < 1:3650400/100‑1 (MQ=255)
ctcAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGa < 1:1268519/100‑1 (MQ=255)
tcAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGAc > 1:3126014/1‑100 (MQ=255)
cAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGAcg > 2:1438923/1‑100 (MQ=255)
gCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGAcgcg > 2:2952216/1‑100 (MQ=255)
aGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATGACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACgcgggc < 2:1691015/100‑1 (MQ=255)
aGTTAAGACAGTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGCAGTCAAGCAGGATGTTTGACgcggg > 2:2776491/1‑99 (MQ=255)
gTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACgcgggcg < 1:2989424/100‑1 (MQ=255)
gTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACgcgggcg < 1:2330858/100‑1 (MQ=255)
ttAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACgcgggcgg < 2:3601688/100‑1 (MQ=255)
tAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGggcggc > 2:1649082/1‑100 (MQ=255)
ctggCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGgcggcg < 1:2296386/98‑1 (MQ=255)
aaGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGgcggcg < 2:1879550/100‑1 (MQ=255)
aGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGgcggcg > 2:2230120/1‑99 (MQ=255)
aGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGt > 2:1255181/1‑100 (MQ=255)
aGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGt < 1:2237675/100‑1 (MQ=255)
aGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTTGACGCGGGCGGCGt < 1:1361555/100‑1 (MQ=255)
ggCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGt > 1:3734541/1‑99 (MQ=255)
ggCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTc > 2:3196504/1‑100 (MQ=255)
gCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCa < 1:2892152/100‑1 (MQ=255)
gCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCa > 1:2176985/1‑100 (MQ=255)
cACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCaa > 1:1159133/1‑100 (MQ=255)
cACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCCGCCCGCGTCaa < 1:3327968/100‑1 (MQ=255)
aCTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCCGCCCGCGTCaaa < 1:349206/100‑2 (MQ=255)
cTCCGACAAGAAATTAGCCCCGCAAATGGGGCATCGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGTCGGTGTCAAGc < 2:2068576/100‑1 (MQ=255)
tCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCa < 1:2952234/100‑1 (MQ=255)
tCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCCGCCCGCGTCAAACa < 1:1416937/100‑1 (MQ=255)
ccGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCAc > 1:2308076/1‑100 (MQ=255)
ccGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCCGCCCGCGTCAAACat < 1:2013730/100‑2 (MQ=255)
ccGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCCGCCCGCGTCAAACat < 1:3457805/100‑2 (MQ=255)
ccGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGCTTGACGCCGCCCGCGTCAAACat < 2:3347065/100‑2 (MQ=38)
cGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCGAGCAcc < 2:2850780/100‑1 (MQ=255)
gACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACca > 1:3597371/1‑100 (MQ=255)
aCAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACcag < 2:3156309/100‑1 (MQ=255)
aCAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCCGCCCGCGTCaaacatcct < 1:1214745/100‑8 (MQ=37)
cAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACcagc > 1:3757256/1‑100 (MQ=255)
cAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACcagc > 2:1500156/1‑100 (MQ=255)
aaGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACcagca < 2:907379/100‑1 (MQ=255)
nttAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATc > 1:1895048/2‑100 (MQ=255)
ttAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCa < 1:2975338/100‑1 (MQ=255)
aGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGc < 1:2204763/100‑1 (MQ=255)
gCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGc < 2:3397825/99‑1 (MQ=255)
gCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCt > 1:1107230/1‑100 (MQ=255)
gCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCt < 1:2494088/100‑1 (MQ=255)
gCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCt > 1:1424071/1‑100 (MQ=255)
cccGCAAATGGGGGATTGAATGTAAATTACGCGTTAACCGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTa > 2:2432585/1‑100 (MQ=255)
cccGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTa > 1:272285/1‑100 (MQ=255)
cccGCAAATGGGGCATTGAATGTAAATTACGCGTAAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTa > 1:1488077/1‑100 (MQ=255)
gCAAATGGGGCGTTGAATGTAAATTACGAGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATcg < 2:882436/100‑2 (MQ=255)
aaaTGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTc < 1:1698295/100‑1 (MQ=255)
ggggCATTGAATGTAACTTACGCGTTAACAGCGCAGAAGTAGAGCAGGATGTTTGAAGCGGGCCGCGTCAAGCCCCAACAGAATCAGCTTATCTTACAGc < 2:2299773/100‑1 (MQ=255)
ggggCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCatc < 1:2659001/100‑3 (MQ=255)
gggCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGca < 1:2085059/100‑1 (MQ=255)
ggCATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGcac > 2:232499/1‑100 (MQ=255)
cATTGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGcaca > 1:1729369/1‑99 (MQ=255)
tGAATGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAgc < 1:1070889/100‑1 (MQ=255)
aaTGTAAATTACGTGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAgcgc < 2:3188247/100‑1 (MQ=255)
aaTGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAgcgc > 2:3358798/1‑100 (MQ=255)
aTGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAgcgcg > 2:816620/1‑100 (MQ=255)
aTGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAgcgcg > 1:3813643/1‑100 (MQ=255)
aTGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAgcgcg > 2:1712597/1‑100 (MQ=255)
aTGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAgcgc > 2:2996125/1‑99 (MQ=255)
tGTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAgcgcgc > 1:795763/1‑100 (MQ=255)
gTAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCt > 2:974561/1‑100 (MQ=255)
tAAATTACGCGTTAACAGCGCATAAGTCAAGCAGGATTTTTGACGCGGACGGCGTCAAGCACCAGGAGAATGAGCTTATCTTCCAGCACAAAGCGCGCtt > 2:1928909/1‑100 (MQ=255)
tAAATTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCtt > 2:1904769/1‑100 (MQ=255)
tAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCtt > 2:74713/1‑100 (MQ=255)
aaTTACGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTcc < 2:187244/100‑1 (MQ=255)
aCGCGTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAgcg < 1:761466/100‑1 (MQ=255)
cgTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCt > 2:1771983/1‑100 (MQ=255)
cgTTAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCt > 1:2994144/1‑100 (MQ=255)
ttAACAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCg < 1:2869462/100‑1 (MQ=255)
aaCAGCGCAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGcc < 2:1725930/100‑1 (MQ=255)
aCAGCGCAGAAGTCAAGCAGGATGTTTAACGCGGGAGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAACGAGCTTCCAGCGCCTCGc > 2:43379/1‑98 (MQ=255)
aGCGCAGAACTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGAt > 1:1310954/1‑100 (MQ=255)
gcgcAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATg < 2:809017/100‑1 (MQ=255)
gcgcAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATg > 1:2126213/1‑100 (MQ=255)
gagcAGAACTCCAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATg < 1:3547495/98‑1 (MQ=255)
cgcAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGt < 1:957908/100‑1 (MQ=255)
gcAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTc > 2:3521158/1‑100 (MQ=255)
gcAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTc < 1:3385075/100‑1 (MQ=255)
gcAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTc < 2:3676085/100‑1 (MQ=255)
gcAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTc > 1:3255796/1‑100 (MQ=255)
gcAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTc < 2:1786700/100‑1 (MQ=255)
cAGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTCa < 1:15837/100‑1 (MQ=255)
aGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTCAg < 1:722570/100‑1 (MQ=255)
aGAAGTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTCAg < 2:652337/100‑1 (MQ=255)
|
GATCCCGAATAAACGGTCTCAGCCAGTTAAGGCACTCCGACAAGAAATTAGCCCCGCAAATGGGGCATTGAATGTAAATTACGCGTTAACAGCGCAGAACTCAAGCAGGATGTTTGACGCGGGCGGCGTCAAGCACCAGCAGAATCAGCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTCAG > NC_000913/4196232‑4196426
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
