Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A16 F48 I0 R1
|
252 |
171.1 |
8397611 |
93.1% |
7818175 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| JC |
NC_000913 |
4,215,179 |
Δ4 bp |
100% |
coding (900‑903/930 nt) |
metA → |
homoserine O‑transsuccinylase |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 4215178 | 2 (0.010) | 138 (0.940) |
82/176 |
NT |
98.6% |
coding (899/930 nt) |
metA |
homoserine O‑transsuccinylase |
| ? | NC_000913 |
4215183 = |
2 (0.010) | coding (904/930 nt) |
metA |
homoserine O‑transsuccinylase |
Only 100 of 160 total aligned reads displayed.
ATGATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4215079‑4215178
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTTTTATTTC > NC_000913/4215183‑4215281
ATGATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGA < 2:3678289/100‑1
ATGATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGA > 1:1978415/1‑100
GATCCGTAAAATACACTGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACG < 2:2622897/100‑1
GATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACG > 1:132468/1‑100
GATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACG < 1:357115/100‑1
GATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACG > 1:28691/1‑100
TCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGC > 2:4029626/1‑100
TCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGC < 2:1747161/100‑1
CCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCA > 2:2228289/1‑100
CGCAAAATATACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCAC < 2:4137593/100‑1
CGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCAC < 2:3063144/100‑1
CGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCAC < 2:2923439/100‑1
CAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACAT < 1:492545/100‑1
tctTACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGA < 2:632914/97‑1
AATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAA > 1:2544951/1‑100
tggtgtgggtGCGGGCGGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATC > 2:3931615/11‑100
TACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATC < 2:1291898/100‑1
CACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCA > 2:2812056/1‑100
CACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACAAGATCACGCCATACGACGGCACATGAATCCA > 1:4002643/1‑100
CCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAAC > 2:3905403/1‑100
CGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACG < 2:2783506/100‑1
CGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACG > 2:3840522/1‑100
CGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACG < 1:1491808/100‑1
GCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGC < 1:783731/100‑1
GCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGC < 1:93008/100‑1
cggGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGn < 1:2076711/96‑2
CGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGAT > 1:1416673/1‑100
CTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAAT > 1:3790645/1‑100
GGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCT > 1:59134/1‑100
CGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTC > 1:4074129/1‑100
CGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTC < 2:3928303/100‑1
GTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCT > 2:804032/1‑100
TAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTG < 1:3937624/100‑1
AGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCAGACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGT < 1:3453237/100‑1
GTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTG > 2:2177208/1‑100
TCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGA < 1:3709139/100‑1
CACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGAT > 2:1292808/1‑100
CGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAG < 2:1083147/100‑1
CGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAG > 1:2994177/1‑100
CGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAG > 2:2957850/1‑100
gatctCTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGAT < 2:3901419/95‑1
ATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGAT < 2:2096821/100‑1
TTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCG > 1:103917/1‑100
TTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCG < 1:1942367/100‑1
ACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTT < 2:1460271/100‑1
CTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATagatc > 1:3901444/1‑95
CTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTA > 1:2953043/1‑100
GTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAG > 1:1624182/1‑100
GTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAG > 1:2450698/1‑100
TTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCG > 1:3912946/1‑100
TACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCCCATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGA > 1:3792670/1‑100
ACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGAT < 2:2312341/100‑1
CCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATT < 2:1908595/100‑1
CCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATT < 2:1478034/100‑1
AACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCA > 2:2023776/1‑100
CTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGC > 1:4081603/1‑100
CTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGC < 1:3364844/100‑1
TGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCA < 2:323082/100‑1
GGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCAC > 2:1413730/1‑100
GGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCAC > 1:1279130/1‑100
GCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACC < 1:1151068/100‑1
CTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCT > 1:1001092/1‑100
CTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCT < 1:3370487/100‑1
CTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCT < 2:1052526/100‑1
TCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCCGTGATAGTCGATCGTTAAGTGATTCAGCACCTT < 2:2520179/100‑1
CAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTA > 1:4058322/1‑100
CAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTA > 1:4029512/1‑100
CAACTATTACGTCAACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATACTCGATCGTTAAGCGATTCAGCACCTT > 1:2818690/1‑99
AACTATTACGTCTACCAGATCACGCCATACGCCGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTA > 2:626810/1‑99
AACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTAC > 2:4011202/1‑100
ACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTA < 2:169724/98‑1
TATTACGTCTACCAGATCACGCCATACGTCGGCACATGAATCCAACGCTAGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTC < 1:422770/100‑1
ATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCA < 1:1123586/100‑1
ATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCA < 1:1327348/100‑1
TTACGTCTACCAGATCACGCTATACGACGTCACATGAATCCAACGCTGAATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACC < 2:694506/96‑1
TTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAG < 1:2113692/100‑1
cgaTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGC < 2:2367655/97‑1
ACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGC > 2:1869092/1‑100
ACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTACTCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTC > 2:84779/1‑100
ACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCAgatcc > 1:2367660/1‑95
ACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTC > 1:4169195/1‑100
ACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTC > 1:192249/1‑100
ACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGAGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTC < 2:3431797/100‑1
CCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCG > 1:2542467/1‑100
CAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGG < 1:3328683/100‑1
AGATCACGCCATACGACGGCACATGAATCCATCGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTC < 2:3711097/97‑1
AGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCcgaagg > 1:2269093/1‑94
AGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGG < 2:1640196/100‑1
AGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGG < 2:198878/100‑1
TCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGC < 1:1711530/100‑1
TCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGC > 1:2572519/1‑100
CACGCCATACGACGGCACATGAATCCAACGCTGGATTAACCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCcgaaggtgcc < 1:1985056/100‑11
CGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTT < 2:1142429/100‑1
GCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTT > 1:2224849/1‑100
CCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTT > 2:2188768/1‑100
CATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTTT > 1:643320/1‑100
CATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTCCCTTTTT < 1:2199312/100‑1
CATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAATCGATCGTTACGCGATAAAGCACCTTACCTCAGGCACCTTCGGGTGCCTGTTT > 2:2328194/1‑100
ATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTT < 2:2648064/98‑1
TACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTTTTA < 2:3019485/100‑1
ATGATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4215079‑4215178
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTTTTATTTC > NC_000913/4215183‑4215281
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
