Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A16 F125 I0 R1
|
327 |
181.4 |
8809959 |
94.1% |
8290171 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| JC |
NC_000913 |
4,215,179 |
Δ4 bp |
100% |
coding (900‑903/930 nt) |
metA → |
homoserine O‑transsuccinylase |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 4215178 | 3 (0.020) | 172 (1.100) |
103/176 |
NT |
98.3% |
coding (899/930 nt) |
metA |
homoserine O‑transsuccinylase |
| ? | NC_000913 |
4215183 = |
3 (0.020) | coding (904/930 nt) |
metA |
homoserine O‑transsuccinylase |
Only 100 of 201 total aligned reads displayed.
ATGATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4215079‑4215178
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTTTTATT > NC_000913/4215183‑4215279
ATGATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGA > 2:1046981/1‑100
TGATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGAC > 2:2792166/1‑100
GATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACG < 1:140066/100‑1
GATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACG > 1:511451/1‑100
GATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACG > 1:291768/1‑100
GATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACG < 2:612054/100‑1
TCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGC < 1:1003114/100‑1
TCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGC > 1:3562298/1‑100
TCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGC < 1:3442215/100‑1
TCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGC < 1:2509238/100‑1
CCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCA > 1:4242941/1‑100
CGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCAC < 1:4027596/100‑1
CGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCAC < 2:2154529/100‑1
CGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCAC < 1:677989/100‑1
AAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATG < 2:3237657/100‑1
AATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAA < 1:991962/100‑1
ACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCC < 2:233717/100‑1
CCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAAC > 1:2374890/1‑100
CCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAAC > 2:836132/1‑100
CGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACG < 2:3783544/100‑1
GCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGC < 1:516255/100‑1
GCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGC < 2:1750903/100‑1
CGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCT > 2:43310/1‑100
GCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGA > 2:1249839/1‑100
CGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGAT < 2:2823152/100‑1
CGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGAT < 1:1518861/100‑1
GAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATT < 1:4081776/100‑1
CTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGCCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAA < 1:2981193/99‑1
TGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATC < 2:648351/100‑1
GGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCT > 2:138582/1‑100
GGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATC < 2:3951379/99‑1
GCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAGCGTTGGATTcatgtg < 1:3301788/100‑7
CGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTC > 2:1312477/1‑100
CGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTC < 2:1421797/100‑1
TAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTG < 1:2493782/100‑1
AGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGT < 1:1537903/100‑1
GTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTG > 2:3523760/1‑100
GTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTG < 1:2949464/100‑1
CGGTAGTTTACTGTTTACCAACTGGCTCAACTCTTACGTCTACCAGATCACGCCATACGACGGCACCTGAAACCAACGCTGGATTAATCTTCTGTGATA > 1:564737/1‑99
CGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAG < 2:1571047/100‑1
CGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAG > 2:2645728/1‑100
CGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAG > 2:2905916/1‑100
GTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTC > 1:3887633/1‑100
GTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTC > 2:186879/1‑100
ATTTACTGTTTACCAACTGGCTCAACTAGTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGAT < 1:3169121/100‑1
TTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATC < 1:3663990/100‑1
TTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATC < 1:882340/100‑1
TTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCG < 2:1536045/100‑1
TACTGTTTACCAACTGGCTCAACTATTACATCTACCAGATCACGCCATACGACGGCACATGAATCCGACGCTGGATTAATCTTCTGTGATAGTCGATCGT < 1:2640161/100‑1
GTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAcg > 2:2271771/1‑98
GTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAG > 1:1801017/1‑100
TTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGC < 2:4289739/100‑1
TTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGC < 1:889698/100‑1
TTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGC < 2:3268663/100‑1
TTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCG > 2:512762/1‑100
TACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGA > 2:4376736/1‑100
TACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCG > 1:2135689/1‑99
TACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCAAATGAATCCAACGCTGGCTTCATCTTCTGTGATAGTCGATCGTTAAGCGA > 1:1987728/1‑100
CCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATT > 2:4025629/1‑100
CAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTC > 2:3685524/1‑100
CAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTC < 2:3273148/100‑1
CAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTC > 1:1753497/1‑100
CAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTC < 2:637189/100‑1
AACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTC < 1:43057/99‑1
ACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAG < 1:1394457/100‑1
TGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCA < 1:842500/100‑1
GGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCAC > 2:3207928/1‑100
GGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCAC < 1:2205981/100‑1
CTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCT > 2:2094575/1‑100
CAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCAAACGCTGGATTAATCGTCTGTGATCGGCGATCGTTAAGCGATTCAGCACCTTA > 1:3599291/1‑100
CTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCT < 1:365963/100‑1
TATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTC < 2:3122516/100‑1
ATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCA > 1:1293521/1‑100
TTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAG < 2:86188/100‑1
TACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGG > 2:1944086/1‑100
TACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAG > 1:3957224/1‑99
tccgatctAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCA < 1:2446783/92‑1
GTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCAC < 1:1948978/100‑1
TCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACC < 1:3211585/100‑1
CTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAGGCGATTCAGCACCTTACCTCAGGCACC < 2:2041188/99‑1
TACCAGATCACGCCATACGACGGCACATGAATCCGACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTT < 1:2311990/100‑1
ACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTC > 2:2757748/1‑100
ACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTC > 2:2767790/1‑100
CAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGG < 2:3248510/100‑1
CAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGG < 2:20173/100‑1
AGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCAagatcgga > 2:2446795/1‑92
AGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGG < 2:247474/100‑1
GATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGT > 2:1622961/1‑100
GATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGT > 2:3170195/1‑100
ATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTG > 2:3390976/1‑100
ACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCT < 1:4355783/100‑1
CCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTT < 1:304513/100‑1
CATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTTn < 1:3874585/100‑2
CATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTTT > 1:3983971/1‑100
ATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTTTT < 1:4217569/100‑1
TACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTTTTA < 2:4065213/100‑1
TACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTTTTA < 2:3510642/100‑1
TACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTTTTA > 2:2328177/1‑100
TACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTTTTA > 1:1773952/1‑100
ACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGTCACCTTCGGGTGCCTTTTTTATT < 1:583601/98‑1
ATGATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4215079‑4215178
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTTTTATT > NC_000913/4215183‑4215279
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
