Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A16 F48 I1 R1
|
17 |
101.2 |
5204606 |
90.8% |
4725782 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC |
NC_000913 |
4,215,179 |
Δ4 bp |
coding (900‑903/930 nt) |
metA → |
homoserine O‑transsuccinylase |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 4215178 | 7 (0.070) | 114 (1.150) |
77/196 |
0.1 |
94.6% |
coding (899/930 nt) |
metA |
homoserine O‑transsuccinylase |
| ? | NC_000913 |
4215183 = |
6 (0.060) | coding (904/930 nt) |
metA |
homoserine O‑transsuccinylase |
Only 100 of 117 total aligned reads displayed.
ATGATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4215079‑4215178
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTTTTATTTC > NC_000913/4215183‑4215281
ATGATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGA > 2:1493645/1‑100
TGATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGAC < 1:1257559/100‑1
GATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACG > 2:1020756/1‑100
ATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGG > 1:1530729/1‑100
CCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCA > 2:1176779/1‑100
CCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCA > 2:1912316/1‑100
CCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCA > 2:2510661/1‑100
CCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCA > 2:412755/1‑100
CCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATAACGCCATACGACGGC > 2:517696/1‑99
CGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCAC < 2:2486355/100‑1
CAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAACTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACAT < 2:1707547/100‑1
AAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATG > 1:1664913/1‑100
AAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGA > 2:969194/1‑100
TACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATC > 2:1605043/1‑100
TACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATC > 2:1605071/1‑100
ACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCC < 1:1739013/100‑1
CACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCA > 1:1246194/1‑100
CACCGCGAGCGAGCTGGCGTAGTCACGGTAATTAACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCA > 1:1566557/1‑100
ACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAA > 1:1140248/1‑100
CCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAAC > 2:1147689/1‑100
CCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAAC < 1:10723/100‑1
CCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAAC > 2:1616126/1‑100
CCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAAC > 2:428467/1‑100
CGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACG > 1:2141388/1‑100
cttccgatctCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGG < 1:353116/90‑1
AGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGG < 1:1614269/100‑1
CGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGAT < 1:517695/100‑1
GCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAA > 2:781778/1‑100
CTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAAT < 2:1917603/100‑1
GGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCT > 1:2221127/1‑100
GCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTT < 2:1664922/100‑1
CGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGAgatcggaga > 2:353117/1‑91
TAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTG < 1:1070446/100‑1
tcTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGT < 1:356101/98‑1
AGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGT > 2:924241/1‑100
GTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTG < 1:969191/100‑1
TCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGA < 1:805605/100‑1
TCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGA < 1:714650/100‑1
CACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTaga > 2:356102/1‑97
ctcttccgatCTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAG < 1:841342/90‑1
CGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAG < 2:2000280/100‑1
TAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCG > 2:1384538/1‑100
ATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGAT < 1:428466/100‑1
TTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCG < 2:30383/100‑1
TTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCG < 2:1566564/100‑1
TTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCG < 2:1530736/100‑1
TTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCG < 2:2158096/100‑1
ACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAAGGCTGGATTAATCTTCTGTGATAGTCGATCGTT > 1:1826075/1‑100
ACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTT > 1:1932437/1‑100
TGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAA > 2:567889/1‑100
GTTTACCTACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAG > 2:1365095/1‑100
GTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAG > 1:1436705/1‑100
GTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAG < 2:1891433/100‑1
TTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGC < 1:2479045/100‑1
TTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGC < 2:281251/100‑1
TTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCG > 2:1773855/1‑100
TTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCG < 1:218914/100‑1
TACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGA < 1:822703/100‑1
TACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGA > 2:1676345/1‑100
ACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGAT > 2:1371461/1‑100
ACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGAT < 1:1894980/100‑1
CAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTC > 1:1909594/1‑100
GGCTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCTTTAAGCGATTCAGCAC > 2:494679/1‑100
CTCAACTATTACGTCTACCAGATCACGCCATACGCCGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCT > 1:186294/1‑100
CTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCT > 2:2097148/1‑100
CTCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCT > 1:2022019/1‑100
TCAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTCGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCATCACCTT > 1:229238/1‑100
CAACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTT > 1:68220/1‑99
CAACTATTACGTCGACCAGATCACGCCATACGACGGCAGATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTA > 1:1600121/1‑100
ACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACC > 1:2573500/1‑100
ACTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACC < 1:1993284/100‑1
CTATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCT < 1:1912306/100‑1
TATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTC > 1:1001819/1‑100
ATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCA < 1:1676336/100‑1
ATTACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCA > 2:1339369/1‑100
TACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGG > 1:382737/1‑100
TACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGG > 2:197930/1‑100
TACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGG < 1:1773845/100‑1
TACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGG < 2:2221141/100‑1
ACGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGC < 1:224143/100‑1
CGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCA > 1:1412943/1‑100
CGTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTCAAGCGATTCAGCACCTTCCCTCAGGCA > 1:73069/1‑100
GTCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCAC > 2:2212921/1‑100
TCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACC < 2:1874648/100‑1
TCTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACC < 1:2552611/100‑1
CTACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCT > 1:547122/1‑100
TACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTT > 2:2407234/1‑100
ACCAGATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTC < 1:412754/100‑1
GATCACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGT < 2:1909604/100‑1
ACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCT > 2:1678533/1‑100
ACGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCT < 1:2576383/100‑1
CGCCATACGACGGCACATGAATCCAACGCTGGATTAGTCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTT > 2:1833702/1‑100
CGCCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTT > 1:60167/1‑100
CCATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTT > 2:2566038/1‑100
CATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTTT < 2:2573518/100‑1
CATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTTT > 2:1043905/1‑100
CATACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTTT < 2:627950/100‑1
TACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTTTTA < 2:1395672/100‑1
TACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTTTTA < 1:2170701/100‑1
ACGACGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTTTTAT < 2:1429599/100‑1
ATGATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4215079‑4215178
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCGGCACATGAATCCAACGCTGGATTAATCTTCTGTGATAGTCGATCGTTAAGCGATTCAGCACCTTACCTCAGGCACCTTCGGGTGCCTTTTTTATTTC > NC_000913/4215183‑4215281
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
