Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F232 I0 R1
|
243 |
156.3 |
7646460 |
93.8% |
7172379 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,648,144 |
(T)7→6 |
100% |
intergenic (‑356/‑384) |
dinQ ← / → arsR |
UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,648,138 | 0 | T | . | 97.1%
| 584.2
/ 9.6
| 136 | intergenic (‑350/‑390) | dinQ/arsR | UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor |
| Reads supporting (aligned to +/- strand): ref base T (2/2); new base . (66/66); total (68/68) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01 |
Only 100 of 159 total aligned reads displayed.
CAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCC > NC_000913/3648039‑3648233
|
gTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttt < 1:2900072/100‑1 (MQ=255)
gTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttt > 2:2363918/1‑100 (MQ=255)
gTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGctt > 2:910951/1‑100 (MQ=255)
aTGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttt > 1:2973262/1‑100 (MQ=255)
aTGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttt > 1:2122219/1‑100 (MQ=255)
tgctATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttt < 2:1189250/97‑1 (MQ=255)
tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttt > 2:2140589/1‑100 (MQ=255)
tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttt < 2:1283200/100‑1 (MQ=255)
tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttt < 1:3735874/100‑1 (MQ=255)
ggTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttta < 1:3643330/100‑2 (MQ=255)
ggTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttta > 2:2998101/1‑99 (MQ=255)
ggTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttta < 1:1109891/100‑2 (MQ=255)
ggTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttta > 1:1295861/1‑99 (MQ=255)
nttAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttttacat > 2:816187/2‑96 (MQ=255)
aTTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttttaca < 2:3478265/99‑4 (MQ=255)
tAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCATAGTCGG‑TTTTTTACATcc < 1:2408225/100‑1 (MQ=255)
aGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCg < 1:969769/100‑1 (MQ=255)
aGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCg > 1:3523018/1‑100 (MQ=255)
tacgatgtcGTTAGATGATGGCTATCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACGTcct < 2:1612818/91‑2 (MQ=14)
cATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGa > 1:1634967/1‑100 (MQ=255)
gATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCACCTCAGGGCTGGAAAGTAAAAAACCGCCGCAAAGTCGG‑TTTTTTACATCCGGATTCg < 1:2675643/100‑1 (MQ=21)
gATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCg > 2:373836/1‑100 (MQ=255)
tGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGa < 1:289737/100‑1 (MQ=255)
tGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGa > 1:2083841/1‑100 (MQ=255)
tGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGa < 2:1551548/100‑1 (MQ=255)
ttAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAg < 1:2253659/100‑1 (MQ=255)
ttAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAg < 1:3683626/100‑1 (MQ=255)
tAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAgg < 2:1634957/100‑1 (MQ=255)
aGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGc < 1:2422925/100‑1 (MQ=255)
aGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGc > 1:1011011/1‑100 (MQ=255)
gatgatGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCt > 1:3581191/1‑100 (MQ=255)
tgatgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCTGATTCGGACAAGGCtga > 1:2465879/1‑98 (MQ=255)
tgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAata > 1:3024733/1‑100 (MQ=255)
tgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAata < 2:94975/100‑1 (MQ=255)
gCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATg < 1:1987263/100‑1 (MQ=255)
aTCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACg > 1:33903/1‑100 (MQ=255)
aTCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACg < 2:3148924/100‑1 (MQ=255)
tctcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTTATATGACGa > 2:1572309/1‑100 (MQ=255)
tctcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGa < 1:2882816/100‑1 (MQ=255)
tcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATg < 1:83921/100‑1 (MQ=255)
tcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATg < 2:1666945/100‑1 (MQ=255)
cACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGa < 1:1007954/100‑1 (MQ=255)
cACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGa > 1:649788/1‑100 (MQ=255)
cTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAcc < 1:3398787/100‑1 (MQ=255)
cTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAcc > 1:1820548/1‑100 (MQ=255)
tCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAccc < 1:2451844/100‑1 (MQ=255)
ccAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCa > 1:1435516/1‑100 (MQ=255)
ccAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCa > 1:3511195/1‑100 (MQ=255)
cAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAg > 1:1411976/1‑100 (MQ=255)
cAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAg > 1:1394205/1‑100 (MQ=255)
cAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAg < 2:1285053/100‑1 (MQ=255)
gTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTg > 1:2661074/1‑100 (MQ=255)
cAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGaa > 1:230210/1‑100 (MQ=255)
cAGAGCCACCAACACAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑ATATTTACATCCGGATTCGGAAAAGGCTTAATATGACGATGACCCAGTGaa > 2:1116012/1‑100 (MQ=25)
agagCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGaaa < 2:438882/100‑1 (MQ=255)
agagCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGaaa < 1:1646491/100‑1 (MQ=255)
gagCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAg < 2:547512/100‑1 (MQ=255)
gagCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAg < 2:1435533/100‑1 (MQ=255)
agCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGt > 1:1991668/1‑100 (MQ=255)
gCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGta < 1:1055257/100‑1 (MQ=255)
gCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGta < 2:3264488/100‑1 (MQ=255)
ccaccaACTCAGGGCTGGAAAGTAAAAAACGGACGCAAAGGCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAAGAGGACGATGACCCAGTGAAAGtat < 2:3597369/100‑1 (MQ=25)
ccaccaACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtat < 2:673954/100‑1 (MQ=255)
caccaACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtata < 2:3742504/100‑1 (MQ=255)
caccaACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtata < 1:1403902/100‑1 (MQ=255)
accaACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtatat > 1:2742998/1‑100 (MQ=255)
ccaACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtatata < 1:1529695/100‑1 (MQ=255)
cTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATc < 2:2751200/100‑1 (MQ=255)
tCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCg < 2:1876978/100‑1 (MQ=255)
aGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTc < 2:3451032/100‑1 (MQ=255)
ggCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCAc > 1:2185795/1‑100 (MQ=255)
ggCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCAc < 2:1684145/100‑1 (MQ=255)
gCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACt < 2:3030363/100‑1 (MQ=255)
gCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCAGAATCGAACAAGACTTAAAAAAACTATGAACCAGTTAAAGTATATAAATAGt > 2:2453334/1‑96 (MQ=12)
cTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAATTTGTCACTg > 2:1336049/1‑100 (MQ=37)
ggAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATCACCCAGTGAAAGTATATAAATCGTCATTGCg > 2:2869230/1‑100 (MQ=38)
aaaGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGat < 1:2458396/100‑1 (MQ=255)
aGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGatat < 2:2215529/100‑1 (MQ=255)
aGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGatat > 1:447223/1‑100 (MQ=255)
gTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGatata < 2:2497130/100‑1 (MQ=255)
tAAAAAACCGACTTTGCGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGatatat > 1:616783/1‑100 (MQ=37)
aaaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGAtatata > 2:927573/1‑100 (MQ=255)
aaaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGAtatata > 1:1074307/1‑100 (MQ=255)
aaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACGCAGTGAAAGTATATAAATCGTCACTGCGATATATAc > 1:3634826/1‑100 (MQ=255)
aaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATAc < 1:912075/100‑1 (MQ=255)
aaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATAc > 1:324321/1‑100 (MQ=255)
aaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATAcc > 2:1685476/1‑100 (MQ=255)
aaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGGGATATATACCg > 1:643929/1‑100 (MQ=255)
aaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCg < 1:373838/100‑1 (MQ=255)
aaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCg > 2:658684/1‑100 (MQ=255)
ccGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATACATCGTCACTGCGATATATACCGAAg > 1:1745350/1‑100 (MQ=255)
ccGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAg < 1:3661083/100‑1 (MQ=255)
gACGCAAAGTCGG‑TTTTTTACCTTCGGATTCGGACAAGGCTTAATATTACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACAGAAGTg > 2:3068062/1‑100 (MQ=255)
gACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTg > 1:486357/1‑100 (MQ=255)
gACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTg > 1:1424163/1‑100 (MQ=255)
aCGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGc < 1:2243999/100‑1 (MQ=255)
gCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctc > 1:2703886/1‑100 (MQ=255)
gCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctc > 2:2600630/1‑100 (MQ=255)
aaaGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctcc > 2:1456143/1‑99 (MQ=255)
gTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctccctcc > 2:2696377/1‑100 (MQ=255)
|
CAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCC > NC_000913/3648039‑3648233
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
