Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F255 I0 R1
|
121 |
91.8 |
4500463 |
95.1% |
4279940 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,648,144 |
(T)7→6 |
100% |
intergenic (‑356/‑384) |
dinQ ← / → arsR |
UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,648,138 | 0 | T | . | 98.9%
| 380.1
/ ‑2.4
| 87 | intergenic (‑350/‑390) | dinQ/arsR | UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base . (49/37); total (49/38) |
| Fisher's exact test for biased strand distribution p-value = 4.37e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.52e-01 |
GTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCC > NC_000913/3648041‑3648229
|
gTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGttt < 1:825092/100‑1 (MQ=255)
gTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGttt > 1:1225481/1‑100 (MQ=255)
gTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGttt < 1:1931207/100‑1 (MQ=255)
tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGtttttt < 1:748859/100‑1 (MQ=255)
tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGtttttt < 2:1225477/100‑1 (MQ=255)
tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGtttttt < 1:1572409/100‑1 (MQ=255)
taatAGCATTGATGCGTTAGATGAGCGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAAACCGACTTTGCGTCGGttttttac < 2:33631/97‑3 (MQ=17)
tATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACTTTGCGTCGGttttttact < 1:108998/100‑4 (MQ=21)
tAGCATTGATGCGTTAGATGATGGCTAACTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCCAAGTCGG‑TTTTTTACATcc > 2:1901490/1‑100 (MQ=18)
aGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCg < 1:941162/100‑1 (MQ=255)
ncATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCgg > 1:1241696/2‑100 (MQ=255)
gCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCg < 1:1936745/99‑1 (MQ=255)
cATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACAGACGCACAGTCGG‑TTGTTTACATCCGGa > 1:396472/1‑100 (MQ=21)
gATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCg > 1:1283538/1‑100 (MQ=255)
aTGCGTTAGATGATGGCTATCTCACTCCATTCATAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCgg < 2:1850132/100‑1 (MQ=21)
tGCGTTAGATTATGGCTATCTCACTCCAGTCAGAGCCACAAACTCAGTGCTGGAAAGT‑AAAAAACCGACGCATAGCTGG‑TTTTTTACATCCGGATTCg < 2:1299188/98‑1 (MQ=18)
tGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGa < 2:636854/100‑1 (MQ=255)
gTTATATCATGGCTATCTCACTCCAGTCAGACCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACaa < 2:445565/100‑1 (MQ=18)
gTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACaa > 1:1502911/1‑100 (MQ=255)
gTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACaa < 2:2008342/100‑1 (MQ=255)
tAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCTGATTCGGACAAg > 1:1232118/1‑99 (MQ=255)
tAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAgg > 1:1624561/1‑100 (MQ=255)
tAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAgg > 1:1201735/1‑100 (MQ=255)
tAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAgg < 2:1690420/100‑1 (MQ=255)
tAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATACGGATTCGGACAAgg > 1:1000539/1‑100 (MQ=255)
aGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAg > 1:1887575/1‑98 (MQ=255)
aGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGc < 2:1858757/100‑1 (MQ=255)
aGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGc < 1:1184479/100‑1 (MQ=255)
aGATGATAGCTATCTCACTCCAGCCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACGTCCTGATTCAGAcctcc < 2:1232113/100‑5 (MQ=14)
gatgatGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCt > 1:478997/1‑100 (MQ=255)
tgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAata > 2:548374/1‑100 (MQ=255)
cTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGa > 1:620830/1‑100 (MQ=255)
tATTTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGAc < 1:1750791/100‑1 (MQ=255)
tATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGAc < 1:2019266/100‑1 (MQ=255)
tctcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACg > 2:701601/1‑99 (MQ=255)
tcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATg < 2:678451/100‑1 (MQ=255)
cACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGa > 1:1633287/1‑100 (MQ=255)
aCTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAc > 2:279573/1‑100 (MQ=255)
cTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAcc > 2:1831336/1‑100 (MQ=255)
cTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAc < 2:1600934/99‑1 (MQ=255)
ccAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAccc > 1:518379/1‑99 (MQ=255)
aGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAg < 2:1245004/99‑1 (MQ=255)
aGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGt < 2:1326618/100‑1 (MQ=255)
gTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTg > 1:909283/1‑100 (MQ=255)
gagCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAACGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTGAATATGACGATGCCCCGTTGaaa > 2:669835/1‑99 (MQ=18)
agCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATAACCCAGTGAAAGt > 1:360351/1‑100 (MQ=255)
gCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGta < 2:1633276/100‑1 (MQ=255)
gCCACCAACGCAGGGCTGGAAAGT‑AAAAATCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGaaat < 2:1962587/98‑2 (MQ=25)
ccaccaACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtat > 1:2246376/1‑100 (MQ=255)
ccaccaACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtat > 2:1978780/1‑100 (MQ=255)
caccaACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtata < 2:2211153/100‑1 (MQ=255)
caACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATaa > 2:303452/1‑100 (MQ=255)
aCTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAAt < 1:2097957/100‑1 (MQ=255)
cTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATaaa > 2:2040295/1‑98 (MQ=255)
cTCAGAGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATaaa < 1:68668/98‑1 (MQ=255)
tCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCg < 1:583403/100‑1 (MQ=255)
cAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGt > 1:190069/1‑100 (MQ=255)
aGGGCTGGAAAGT‑AAAAAACAGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGAAGATGACACAGTGAAAGTATATAAATTGt > 2:391605/1‑99 (MQ=25)
gggCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGtga > 1:2036737/1‑98 (MQ=255)
gCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACTATGACCCAGAAAAAGTATAAAAATCTTCAc > 2:1063509/1‑99 (MQ=25)
gCTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACt > 2:1820261/1‑100 (MQ=255)
cTGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTg > 1:1648125/1‑100 (MQ=255)
tGGAAAGT‑AAAAAACCGACGCAAAGTCTG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCTTGTTAAAGTATATAAATCGTCACTga < 2:1139333/100‑2 (MQ=37)
tGGAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGc < 1:532920/100‑1 (MQ=255)
gAAAGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGa > 2:805883/1‑100 (MQ=255)
aaaGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGat < 2:1614059/100‑1 (MQ=255)
aaaGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGat < 1:1414672/100‑1 (MQ=255)
aaaGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGat < 1:697143/100‑1 (MQ=255)
aaaGT‑AAAAAACCGACGAAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGat < 1:353815/100‑1 (MQ=255)
aaGT‑AAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGata < 1:805883/100‑1 (MQ=255)
aaaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGatatat > 1:2178558/1‑99 (MQ=255)
aaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATAc > 1:90288/1‑100 (MQ=255)
aaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATAcc > 1:2246/1‑100 (MQ=255)
aCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGaa > 2:1680344/1‑100 (MQ=255)
aCCGACGCAAAGTCGG‑ATTTTTAAATCCGGATTCGGACAAGGATTAATATGATGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGa > 2:315409/1‑99 (MQ=255)
ccGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAg > 2:1692814/1‑100 (MQ=255)
ccGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAg < 1:2098377/100‑1 (MQ=255)
ccGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAg > 1:246603/1‑100 (MQ=255)
cGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAg < 2:1749729/99‑1 (MQ=255)
cGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGt < 2:2102869/100‑1 (MQ=255)
cGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGt > 2:1559840/1‑100 (MQ=255)
gACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGCGAAAGTATATAAATCGTCACTTCGATATATACCGaa > 1:995148/1‑97 (MQ=255)
aCGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATACATACCGAAGTGc > 2:1848695/1‑100 (MQ=255)
cGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGct > 2:2081726/1‑100 (MQ=255)
cGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGct > 1:2187705/1‑100 (MQ=255)
gCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctc < 1:629714/100‑1 (MQ=255)
gCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctc < 2:48920/100‑1 (MQ=255)
gCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctc < 1:270185/100‑1 (MQ=255)
cAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctcc > 2:416633/1‑100 (MQ=255)
cAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctcc > 1:391378/1‑100 (MQ=255)
cAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctcc < 1:138023/100‑1 (MQ=255)
cAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctcc > 1:103396/1‑100 (MQ=255)
cAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGct > 2:1585561/1‑98 (MQ=255)
aaaaGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctcc > 2:455339/2‑100 (MQ=255)
aaGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctc < 1:711770/97‑1 (MQ=255)
|
GTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGT‑AAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCC > NC_000913/3648041‑3648229
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
