Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F210 I0 R1
|
188 |
159.1 |
7866933 |
93.3% |
7339848 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,648,144 |
(T)7→6 |
100% |
intergenic (‑356/‑384) |
dinQ ← / → arsR |
UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,648,138 | 0 | T | . | 97.2%
| 503.8
/ 3.9
| 126 | intergenic (‑350/‑390) | dinQ/arsR | UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor |
| Reads supporting (aligned to +/- strand): ref base T (0/1); major base . (68/54); minor base A (1/1); total (70/56) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 153 total aligned reads displayed.
CAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCC > NC_000913/3648039‑3648233
|
aGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGt > 1:1243185/1‑99 (MQ=255)
aGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGt < 1:2762778/99‑1 (MQ=255)
gTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttt < 2:2315152/100‑1 (MQ=255)
gTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttt > 1:1647187/1‑100 (MQ=255)
gTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtt > 1:2617607/1‑99 (MQ=255)
tATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttt < 1:1830802/100‑1 (MQ=255)
tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGTTACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttt < 1:233411/100‑1 (MQ=255)
tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttt < 2:57235/100‑1 (MQ=255)
tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttt < 2:3870832/100‑1 (MQ=255)
ggTATTAGCATTGATGCGTTAGATGATGGCTATGTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAATACCGACGCAAAGTCGGtttttta < 2:842860/100‑2 (MQ=255)
ggTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCTAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttta < 1:2494892/100‑2 (MQ=255)
gctagtAGGATTGATGTGTTAGATGAGTGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttt < 2:3182617/91‑1 (MQ=14)
tATTAGTATTGATCTGTTAGATGATAGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTa < 2:268992/99‑1 (MQ=14)
tATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttttaca < 2:649332/100‑4 (MQ=255)
tATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttttaca > 2:1972577/1‑97 (MQ=255)
aTTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttttacat > 1:393712/1‑96 (MQ=255)
aGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCg > 2:3089996/1‑100 (MQ=255)
aGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCg > 1:2249080/1‑100 (MQ=255)
aGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGACATAAAAAAAAAAAAAATACGCAAAGTCGG‑TATTTTACATCCg > 1:981868/1‑100 (MQ=21)
aGCATTGATGCGCTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtgttttaaatacg > 2:1473347/1‑93 (MQ=18)
cATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAATAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCgaa > 1:2015777/1‑98 (MQ=255)
ttGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGAtt > 2:1841860/1‑100 (MQ=255)
gATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATTCGGAtt > 2:2860858/1‑98 (MQ=255)
aTGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCgg < 2:1970125/100‑1 (MQ=255)
aTGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCgg > 1:358199/1‑100 (MQ=255)
aTGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTAAATCCGGaat > 1:315182/1‑95 (MQ=255)
tGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGa < 2:106239/100‑1 (MQ=255)
gCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGAc < 2:2038177/100‑1 (MQ=255)
cGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTAAATTCGGATTCTGACa > 1:905248/1‑100 (MQ=18)
cGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCAG‑ATTTTTACATACGGAATCGGACa > 1:467700/1‑100 (MQ=18)
gTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACaa < 1:1710979/100‑1 (MQ=255)
ttAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAg < 2:1273546/100‑1 (MQ=255)
ttAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAg < 2:2115027/100‑1 (MQ=255)
tAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAgg > 1:3876783/1‑100 (MQ=255)
aGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAATGTCGG‑TTTTTTACATCCGGATTCGGACAAgg < 2:1735968/99‑1 (MQ=255)
aGATGATGGCTATCTCACTCCAATCAGAGCCACCAACTCAGTGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TGTTTTACATCCGGATTCGGACAAGGc < 1:168128/100‑1 (MQ=21)
atgatgTCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGATGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCt < 1:1456460/99‑1 (MQ=18)
tgatgGCTCTCTCACTCCAGTCAAAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACACCCAGTCGG‑TTTTTTACATCCGTATTCTGACAAGGCt > 2:43897/1‑98 (MQ=17)
tgatgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑CTTTTTACATCCGGATTCGGACAAGGCTTa > 2:2590685/1‑100 (MQ=255)
gatgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTaa < 1:2409606/100‑1 (MQ=255)
gatgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTaa > 2:429573/1‑100 (MQ=255)
gatgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTaa < 1:1982482/100‑1 (MQ=255)
atgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAat < 2:2249060/100‑1 (MQ=255)
ttgCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTTGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTaa < 2:1581461/96‑1 (MQ=255)
ggCGATCTCACTCCAATCAGAGCCACCAAATCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTAAATCAGAATTTGAACACGGCTTaa > 2:1835844/1‑97 (MQ=11)
tATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGAc < 1:2621044/100‑1 (MQ=255)
tATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGAc < 1:97054/100‑1 (MQ=255)
tATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGAc < 2:358193/100‑1 (MQ=255)
tATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAAGCTTAATATGa > 1:655889/1‑99 (MQ=255)
tctcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTAAATCCGGAATCCAACAAGGCTTAATATGa > 1:33108/1‑97 (MQ=17)
tcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATg > 2:3269012/1‑100 (MQ=255)
cTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTAAATCCGGATTCGAAAAAGGCTAAATATAACGAt > 1:2547408/1‑96 (MQ=17)
cTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTAACATCCGGAATCGGACAAGGCTTAAtatgactatgac > 2:2122711/1‑99 (MQ=18)
tCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGAccc < 1:316805/100‑1 (MQ=255)
ccATTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACCCAAAGTCGG‑TATTTTACATCCGGACTCGGACAAGGCTTAAAATGACGATGACCCa > 2:279619/1‑100 (MQ=21)
ccAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAATC‑GATATTTTACATCCGAATTCGGACAAGGCTTAATATGACGATGACCCa > 1:1113052/1‑100 (MQ=21)
cAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTTCAACACGCCTTTCTATGACGATGACCCAGTGaa > 2:3720424/1‑100 (MQ=17)
agagCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGaaa < 2:613139/100‑1 (MQ=255)
agCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGt < 1:274214/100‑1 (MQ=255)
agCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGt > 1:685063/1‑100 (MQ=255)
gCCACCAACTCAGGGCTGGAAAGTAAAAAACTGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGta < 1:1912801/100‑1 (MQ=255)
gCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGta < 1:3090024/100‑1 (MQ=255)
caccaACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtata > 1:1319436/1‑100 (MQ=255)
caccaACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtata > 1:3682147/1‑100 (MQ=255)
aaCTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATaaa < 1:1920017/100‑1 (MQ=255)
aCTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAATGAAAGTATATaaa > 1:803152/1‑99 (MQ=255)
cTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATc < 1:3398189/100‑1 (MQ=255)
tCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCg < 1:2690330/100‑1 (MQ=255)
cAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATTCGGATTCCGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAAt > 2:2020497/1‑97 (MQ=37)
cAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGTATTAGAAAAAGGCTTAAAATGAAGTTGACAAATTGAAATtacata > 2:61642/1‑94 (MQ=9)
cAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGt > 2:2806070/1‑100 (MQ=255)
cAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGt > 1:3172024/1‑100 (MQ=255)
gggCTGGAAAGTAAAAAGCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGGAAGTATATAAATCGTCa < 2:218727/100‑1 (MQ=38)
gggCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCa < 1:3226117/100‑1 (MQ=255)
gCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACt > 1:3629493/1‑100 (MQ=255)
cTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCTTCAc > 2:293247/1‑98 (MQ=255)
ggAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCg > 1:1618341/1‑100 (MQ=255)
cggatgTAAAAAACCGACTTTGCGTAGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCg > 2:3706359/6‑100 (MQ=25)
aaaGTAAAAAACCGACGCAAATTC‑GATTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGat < 1:2680712/100‑1 (MQ=39)
aaGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGata < 2:1319422/100‑1 (MQ=255)
tAAAAAACCGACTTTGCGTCGG‑TTTTTTACATCCGGATTCGGAAAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGatatat > 1:1038673/1‑100 (MQ=37)
tAAAAAACCGACTTTGCGTCGG‑TGTTTTACATACAGATTCGGACAAGGCTTAGTATGACGATGAAACAGTGAAAGTATATAAATCGTCACTGCGatatat > 2:1434012/1‑100 (MQ=19)
aaaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGAtatata < 1:2293932/100‑1 (MQ=255)
aaaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGAtatata > 1:1802071/1‑100 (MQ=255)
aaaaaaCCGACGCAAAGTCGG‑TTTATTACATCCGGATTCGGACAAAGCTTAATATAACGATGACCCACTGAAAGTATAAAACTGGTCACTGCGatataca > 2:2038837/1‑98 (MQ=37)
aaaaaaCCGACGCAAAGTCGG‑TTTATTACAACCGGATGCGGACAAAACTTAATATGACAATGACACAGTGAAAGTATATAAATAGTCGCTGGGGgatata > 2:1669127/1‑100 (MQ=255)
aaaaaaCCGACGCAAAGTAGG‑ATTTTTACATCCGGATTCGAACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGAtatata > 2:753137/1‑100 (MQ=255)
aaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATAc > 2:1330173/1‑100 (MQ=255)
aaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACAATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCg < 2:560310/100‑1 (MQ=255)
ccGACGAAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAATGAAAGTATATAAATCGTCACTGCGATATATACCGa > 1:926433/1‑98 (MQ=255)
gACGCATAGTCGG‑TTTTTTACATCCGGATTCGTACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGaa < 1:502162/97‑1 (MQ=255)
gACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGTCGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAg < 2:1591871/98‑1 (MQ=255)
cGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGct > 2:3795505/1‑100 (MQ=255)
cAAAGTCGG‑TTTTTTACATCCGGATTCGGCCAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctcc < 2:2350121/100‑1 (MQ=255)
cAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctcc > 1:3811405/1‑100 (MQ=255)
cAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctcc > 1:1441110/1‑100 (MQ=255)
aaaGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctccc < 1:2806096/100‑1 (MQ=255)
aaGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctccct < 1:2394786/100‑1 (MQ=255)
aGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctccctc > 1:3802081/1‑100 (MQ=255)
gTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctccctcc > 2:3498804/1‑100 (MQ=255)
|
CAGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCC > NC_000913/3648039‑3648233
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
