Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F53 I1 R1
|
64 |
112.2 |
5657101 |
94.0% |
5317674 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,572,318 |
T→C |
E395E (GAA→GAG) |
glgB ← |
1,4‑alpha‑glucan branching enzyme |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,572,318 | 0 | T | C | 99.0%
| 347.6
/ ‑4.7
| 96 | E395E (GAA→GAG) | glgB | 1,4‑alpha‑glucan branching enzyme |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (50/45); total (50/46) |
| Fisher's exact test for biased strand distribution p-value = 4.79e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 |
CAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGTTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTC > NC_000913/3572221‑3572413
|
cAAATTCGTTCGGGATCCACTCCCCCTCTTTACGCCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATGCCAAAACGTTc < 1:1489214/100‑1 (MQ=255)
aaTTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCaa < 2:2803536/100‑1 (MQ=255)
aTTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAAt < 2:247146/100‑1 (MQ=255)
cgttcgGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCa > 1:520226/1‑100 (MQ=255)
gttcgGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAg > 1:2712877/1‑100 (MQ=255)
gttcgGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAg > 2:59311/1‑100 (MQ=255)
gttcgGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAg < 2:489530/100‑1 (MQ=255)
gttcgGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAg > 2:445412/1‑100 (MQ=255)
ttcgGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGt < 1:1109635/100‑1 (MQ=255)
ttcgGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGt < 1:2733179/100‑1 (MQ=255)
ttcgGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGt < 2:1727539/100‑1 (MQ=255)
cgGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTaa > 1:136489/1‑100 (MQ=255)
cgGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTaa > 1:672260/1‑100 (MQ=255)
cgGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTaa > 1:946969/1‑100 (MQ=255)
cgGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTaa > 1:134933/1‑100 (MQ=255)
gggATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTaaa > 1:2691849/1‑100 (MQ=255)
ggATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAg > 1:1187278/1‑100 (MQ=255)
aTCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAgcg > 2:817780/1‑100 (MQ=255)
ccACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGcgcg < 2:28463/100‑1 (MQ=255)
cACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGCCGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGt > 2:974458/1‑100 (MQ=255)
cTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGt < 1:805228/98‑1 (MQ=255)
cTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTa > 1:436518/1‑100 (MQ=255)
cccccTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTAcc > 2:972984/1‑100 (MQ=255)
cccccTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTAcc < 1:2629964/100‑1 (MQ=255)
cccccTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTAcc < 1:2630137/100‑1 (MQ=255)
cccTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACcga > 2:1474361/1‑100 (MQ=255)
ctctTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACcgacg < 2:1115729/100‑1 (MQ=255)
ttACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGa < 1:724819/100‑1 (MQ=255)
ggCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGtn < 1:2099518/100‑2 (MQ=255)
cTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTAc < 1:673646/100‑1 (MQ=255)
tGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACt < 1:439538/100‑1 (MQ=255)
tcttccgatctAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTg < 2:943566/90‑1 (MQ=255)
gTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTg > 1:2766045/1‑100 (MQ=255)
gTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTg < 2:436523/100‑1 (MQ=255)
aGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGAc < 2:727114/100‑1 (MQ=255)
aGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGAc < 1:1348858/100‑1 (MQ=255)
aGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGAc > 2:413377/1‑100 (MQ=255)
gTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACt < 1:840506/100‑1 (MQ=255)
gTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACt > 2:2755849/1‑100 (MQ=255)
cgcgATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTc > 2:291572/1‑100 (MQ=255)
gATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACg > 1:453947/1‑100 (MQ=255)
aaaTCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGagatcggaaga > 1:943559/1‑90 (MQ=255)
aTCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGa > 2:1931625/1‑99 (MQ=255)
aTCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGAc > 2:1675332/1‑100 (MQ=255)
aTCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGAc > 2:1129445/1‑100 (MQ=255)
tCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGAcc < 2:2480401/100‑1 (MQ=255)
cATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCa > 1:1080234/1‑100 (MQ=255)
aTTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCAt > 1:2120171/1‑100 (MQ=255)
tagACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATa < 1:1711612/98‑1 (MQ=255)
cttccgatctgCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAg < 2:1315671/90‑1 (MQ=255)
gACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAg > 2:1732250/1‑99 (MQ=255)
gACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGt > 2:1711500/1‑100 (MQ=255)
gACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGt > 2:2125691/1‑100 (MQ=255)
gACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGt < 2:79526/100‑1 (MQ=255)
aCGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGtt < 1:1212103/100‑1 (MQ=255)
ccACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTa < 1:627153/100‑1 (MQ=255)
ccACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTa < 2:1481770/100‑1 (MQ=255)
ccACCGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTa < 1:1451934/100‑1 (MQ=255)
cGCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATc < 1:1798124/100‑1 (MQ=255)
gCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAgagatcggaag > 1:1315663/1‑90 (MQ=255)
gCATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCa < 1:1784345/100‑1 (MQ=255)
cATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAg < 2:2712901/100‑1 (MQ=255)
cATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAg < 1:1222838/100‑1 (MQ=255)
cATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAg > 1:2573487/1‑100 (MQ=255)
cATCGACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAg > 2:2020617/1‑100 (MQ=255)
gaggcgcagcgcaTCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGGTACTGACTTCACGGCGACCATAGGTGTAGATCAGCgtg > 2:1272055/4‑100 (MQ=255)
gACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCgtg > 2:2267389/1‑100 (MQ=255)
gACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCgtg > 2:2738574/1‑100 (MQ=255)
gACGCGCAGCGCATCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCgtg > 2:2389448/1‑100 (MQ=255)
ttccgatcttCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTcc < 2:2256145/91‑1 (MQ=255)
cgcagcgcaTCACGACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTcc < 2:779481/100‑1 (MQ=255)
cgcagcgcaTCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTcc < 2:2451151/100‑1 (MQ=255)
gcagcgcaTCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCa > 1:572738/1‑100 (MQ=255)
gcagcgcaTCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCa > 2:263618/1‑100 (MQ=255)
cagcgcaTCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAg < 1:2755824/100‑1 (MQ=255)
cagcgcaTCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAg > 1:1063964/1‑100 (MQ=255)
agcgcaTCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGt > 2:233704/1‑100 (MQ=255)
gcgcaTCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTc > 2:1135735/1‑100 (MQ=255)
cgcaTCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTcc < 1:817774/100‑1 (MQ=255)
cgcaTCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTcc < 2:965167/100‑1 (MQ=255)
cgcaTCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTcc > 2:1348116/1‑100 (MQ=255)
cgcaTCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTcc < 1:605712/100‑1 (MQ=255)
aTCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTTACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCtga > 2:1632719/1‑100 (MQ=255)
aTCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCtga < 1:1474349/100‑1 (MQ=255)
tCAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAgatcggaa > 1:2256127/1‑93 (MQ=255)
cAATACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCtgatg < 2:637948/100‑1 (MQ=255)
aTACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTgatgat < 2:2573508/100‑1 (MQ=255)
tACCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATa > 1:1444737/1‑100 (MQ=255)
aCCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAg > 2:2140764/1‑100 (MQ=255)
aCCAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAg > 2:120709/1‑100 (MQ=255)
ccAAAACGCTCAATCCAGTAACGCGCGGTACCGACGAGGGAGTTCCTGCCTCCGCGGCGCCCAACGTTGTAGATCAGCGTGTTCCAGTCCTGataata > 1:2158377/1‑98 (MQ=255)
ccAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGc > 1:1906166/1‑100 (MQ=255)
ccAAAACGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGc < 1:1711487/100‑1 (MQ=255)
acaaCGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCATCGTGTTCCAGTCCTGATGATAGcc < 1:974451/97‑1 (MQ=255)
aaaaCGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCt > 2:2781818/1‑100 (MQ=255)
aaCGCTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTc < 1:1219516/100‑1 (MQ=255)
|
CAAATTCGTTCGGGATCCACTCCCCCTCTTTACGGCTGTAGTCGCGATAAATCATTGACGCCACCGCATCGACGCGCAGCGCATCAATACCAAAACGTTCAATCCAGTAAAGCGCGTTACCGACGAGGAAGTTACTGACTTCACGGCGACCATAGTTGTAGATCAGCGTGTTCCAGTCCTGATGATAGCCTTC > NC_000913/3572221‑3572413
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
