Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F255 I0 R1
|
121 |
91.8 |
4500463 |
95.1% |
4279940 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,967,887 |
G→A |
66.8% |
A183V (GCC→GTC) |
ptsP ← |
PEP‑protein phosphotransferase enzyme I; GAF domain containing protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,967,887 | 0 | G | A | 66.8%
| 100.6
/ 78.2
| 98 | A183V (GCC→GTC) | ptsP | PEP‑protein phosphotransferase enzyme I; GAF domain containing protein |
| Reads supporting (aligned to +/- strand): ref base G (15/17); new base A (33/31); total (50/48) |
| Fisher's exact test for biased strand distribution p-value = 8.29e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
AGCGCCCCGGTCAGTCGTTCGCGTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGGCAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAACTGCGACTGAGAAAGAATAGCTG > NC_000913/2967788‑2967983
|
aGCGCCCCGGTCAGTCGTTCGCGTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCgg < 2:134360/100‑1 (MQ=255)
aGCGCCCCGGTCAGTCGTTCGCGTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCgg > 1:1638387/1‑100 (MQ=255)
gcgcCCCGGTCAGTCGTTCGCGTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGGc > 1:1016135/1‑100 (MQ=255)
cgcCCCGGTCAGTCGTTCGCGTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGGCa > 1:515455/1‑100 (MQ=255)
gcCCCGGTCAGTCGTTCGCGTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACaa > 1:278450/1‑100 (MQ=255)
ccGGTCAGTCGTTCGCGTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACATGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCg < 2:1238078/100‑1 (MQ=255)
ggTCAGTCGTTCGCGTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGGCAATCGcc < 2:1016133/100‑1 (MQ=255)
ggTCAGTCGTTCGCGTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGcc < 1:1867769/100‑1 (MQ=255)
cAGTCGTTCGCGTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCcaca < 2:1617537/100‑1 (MQ=255)
aGTCGTTCGCGTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGGCAATCGacacac > 1:135611/1‑100 (MQ=255)
aGTCGTTCGCGTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCacac > 2:1394242/1‑100 (MQ=255)
cGTTCGCGTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAACCTTCGACAATCGCCACACCAg > 1:887272/1‑100 (MQ=255)
ttCGCGTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGt < 2:57318/100‑1 (MQ=255)
ttCGCGTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGt < 2:383767/100‑1 (MQ=255)
tCGGGTTCCAGAGCGGGATCCAGCGTTGATGCCTGATACATCTGTTCCATTAAATGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGtg < 1:306565/100‑1 (MQ=255)
tCGCGTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGtg > 2:977894/1‑100 (MQ=255)
tCGCGTTCCAGAGCCCAATCCACCGTAGATGCCTTATACACCTGTTCCATTAAATGTAACGTGGCATCCTGCTAGCCTTCGACAATCGCCAAACCAGGtg < 2:462478/100‑1 (MQ=255)
cgcgTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGGCAATCGCCACACCAGGtgc > 1:1492401/1‑100 (MQ=255)
cgcgTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGtgc > 2:1174749/1‑100 (MQ=255)
cgcgTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGtgc < 2:1549764/100‑1 (MQ=255)
cgTTCCCGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGGCAATCGCCACACCAGAtgctg > 2:442005/1‑100 (MQ=255)
cgTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGCCAATCGCCACACCAGGtgctg > 2:1444951/1‑100 (MQ=255)
gTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGtgctgc > 1:1829986/1‑100 (MQ=255)
ttCCAGAGCCGGATCCAGCGTTGATGCATGATACACCTGTTCCATTAAAGGTCACGTGGCATCCTGCCAACCTTAGTCAATAGCCACACCACGt > 2:159274/1‑94 (MQ=255)
ccAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCgg > 2:272176/1‑100 (MQ=255)
agagCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTa < 2:251002/100‑1 (MQ=255)
gagCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGGCAATCGCCACACCAGGTGCTGCCGGTaa > 1:2067724/1‑100 (MQ=255)
gCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATg > 1:397132/1‑100 (MQ=255)
cGGATCCAGCGTTGATGCCTGATACACTTGTTCCATTAAAGGTAACGTGGTATCCTGCCATCCTTCGGAAATCGCCATACCAGGTGCTGCCGGTAATg < 2:698540/98‑1 (MQ=255)
cGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGGCAATCGCCACACCAGGTGTTGCCGGTAATgcg < 2:739075/100‑1 (MQ=255)
gATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGGCAATCGCCACACCAGGTGCTGCCGGTAATGcgcg < 1:133417/100‑1 (MQ=255)
gATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGcgcg < 1:1138706/100‑1 (MQ=255)
gATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGcgcg > 1:833569/1‑100 (MQ=255)
gATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGcgcg < 2:1137903/100‑1 (MQ=255)
gATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGcgcg < 1:888541/100‑1 (MQ=255)
tCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGa < 2:107403/100‑1 (MQ=255)
tCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGa < 2:278451/100‑1 (MQ=255)
cAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGGCAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGAtt > 1:419131/1‑100 (MQ=255)
cAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGAtt > 2:527059/1‑100 (MQ=255)
cAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGAtt > 2:1857080/1‑100 (MQ=255)
aGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTc < 2:501208/100‑1 (MQ=255)
cGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGGCAATCGCCAAACCAAGTGCTGACAGTAATACAAGAATTcgc > 1:2004123/1‑100 (MQ=255)
gTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGGCAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTcgcg < 2:1638376/100‑1 (MQ=255)
gATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCt > 2:2121325/1‑100 (MQ=255)
gCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATTCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGc < 2:469906/100‑1 (MQ=255)
ccTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCt < 1:2121339/96‑1 (MQ=255)
ccTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCg > 1:19433/1‑100 (MQ=255)
cTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGGCAATCGCCACACCAGGTGCTGCCGGTAATTCGCGGATTCGCGTCTGGCGa < 2:1060983/100‑1 (MQ=255)
cTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGa < 2:1824010/100‑1 (MQ=255)
cacCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGc > 1:1054841/1‑100 (MQ=255)
cacCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGc > 2:181808/1‑100 (MQ=255)
acCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGGCAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGcc < 2:1203846/100‑1 (MQ=255)
acCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTgac < 1:1520719/100‑3 (MQ=255)
ccTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGGCAATCGCCATACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGc < 2:155660/98‑1 (MQ=255)
tGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCaa > 1:2094238/1‑100 (MQ=255)
gTTCCATTACAGGTAACGTACCATCCTGCCAGCCTTCGACACTCGCCACACCAGGTGCTGCCGGTAATGCACTGATTCGCGTCTGGCGATATTGCCCaaa > 2:356009/1‑100 (MQ=255)
ttccgatctaGGTAACGTGGCATCCTGCCAGCCTTCGGCAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAAc < 1:225687/91‑1 (MQ=255)
tCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACa < 1:899531/100‑1 (MQ=255)
tCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACa > 2:1334294/1‑100 (MQ=255)
ccATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGGCAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACaa > 2:18143/1‑100 (MQ=255)
cATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGGCAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACaa < 2:673814/99‑1 (MQ=255)
cATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGGCAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAg > 2:2225660/1‑100 (MQ=255)
cATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGGCAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAg < 1:1786476/100‑1 (MQ=255)
cATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAg > 1:2221356/1‑100 (MQ=255)
cATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAg > 1:784451/1‑100 (MQ=255)
cATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAg > 1:1223560/1‑100 (MQ=255)
aTTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAgg < 1:166536/100‑1 (MQ=255)
aTTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAgg < 1:429464/100‑1 (MQ=255)
aTTAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAgg < 2:1317950/100‑1 (MQ=255)
ttAAAGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGc < 1:2022434/100‑1 (MQ=255)
aaaGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAg < 1:181808/100‑1 (MQ=255)
aaGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACCTCAGGTGCTGCCGGTACTGCGCGGATTCACGTCTCCCGATATTACCCAAACAAGGCa > 1:126580/1‑98 (MQ=255)
aaGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGt > 2:15505/1‑100 (MQ=255)
aaGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGt > 1:434455/1‑100 (MQ=255)
aGGTAACGTGGCATCCTGCCAGCCTTCGGCAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACagatcggaa > 2:225687/1‑92 (MQ=255)
aGGTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTc > 2:1027756/1‑100 (MQ=255)
ggTAACGTGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGTGTCTGGCGATATTGCCCTAACAAGGCAGtga < 1:1508828/100‑3 (MQ=255)
gTAACGTGGCATCCTGCCAGCCTTCGACAATAGCCACACCAGATGCTCCCGGTAATGCGCGGAATCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCaa > 2:898917/1‑100 (MQ=255)
aaCGTGGCATCCTGCCAGCCGTCGGCAATCGCCACACCAGGTGCTTCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAAc < 2:472676/99‑1 (MQ=255)
aCGTGGCATCCTGCCAGCCTTCGGCAATCGACACACCAGGTGCTGCCGGTAATGCGCGGATTCGCATCTGGCGATATTGCCCAAACAAGGCATTCAACt > 2:200100/1‑99 (MQ=255)
gctggcaggatGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAACTGc > 1:1494646/11‑100 (MQ=255)
tGGCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAACTGCGa > 1:1546295/1‑100 (MQ=255)
gCATCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAACTGCGACt > 2:263461/1‑100 (MQ=255)
aTCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAACTGCGACTga < 2:122349/100‑1 (MQ=255)
tCCTGCCAGCCTTCGGCAATCACCACACCAGGAGCTGCCGGTAATGCTCGGATTCGCGTCTGGCAAAATTGCACAAACAAGGCAGTCAACTGCGAc > 2:424404/1‑96 (MQ=255)
tCCTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAACTGCGACTgag < 1:2002552/100‑1 (MQ=255)
ccTGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAACTGCGACTgaga < 1:15076/100‑1 (MQ=255)
tGCCAGCCTTCGGCAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAACTGCGACTGagaaa > 1:1689144/1‑100 (MQ=255)
tGCCAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAACTGCGACTGagaaa > 1:216902/1‑100 (MQ=255)
gCCAGCCTTCGGCAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAACTGCGACTGagaaag < 2:1025761/100‑1 (MQ=255)
gCCAGCCTTCGGCAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAACTGCGACTGagaaag > 1:733290/1‑100 (MQ=255)
cAGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAACTGCGACTGagaaagaa > 2:2213308/1‑100 (MQ=255)
aGCCTTCGGCAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAACTGCGACTGAGAAAGAAt < 1:1644077/100‑1 (MQ=255)
aGCCTTCGGCAATCGCCACACCAGGTGCTGCCGGTAACGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAACTGCGACTGagaaag < 2:1902335/97‑1 (MQ=255)
aGCCTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAACTGCGACTGAGAAAGAAt < 2:43853/100‑1 (MQ=255)
gCCTTCGGCAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAACTGCGACTGAGAAAGAATa < 2:1640441/100‑1 (MQ=255)
cTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAACTGCGACTGAGAAAGAATAGc > 1:393585/1‑100 (MQ=255)
cTTCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAACTGCGACTGAGAAAGAATAGc > 1:1798527/1‑100 (MQ=255)
ttCGACAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAACTGCGACTGAGAAAGAAt < 1:885179/96‑1 (MQ=255)
tCGGCAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAACTGCGACTGGGAAAGAATAGCTg < 2:713876/100‑1 (MQ=255)
|
AGCGCCCCGGTCAGTCGTTCGCGTTCCAGAGCCGGATCCAGCGTTGATGCCTGATACACCTGTTCCATTAAAGGTAACGTGGCATCCTGCCAGCCTTCGGCAATCGCCACACCAGGTGCTGCCGGTAATGCGCGGATTCGCGTCTGGCGATATTGCCCAAACAAGGCAGTCAACTGCGACTGAGAAAGAATAGCTG > NC_000913/2967788‑2967983
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
