Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F255 I0 R1
|
121 |
91.8 |
4500463 |
95.1% |
4279940 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,512,561 |
Δ1 bp |
31.1% |
intergenic (‑217/+73) |
yhfZ ← / ← trpS |
putative DNA‑binding transcriptional regulator/tryptophanyl‑tRNA synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,512,560 | 0 | T | . | 31.1%
| 207.4
/ 103.6
| 90 | intergenic (‑216/+74) | yhfZ/trpS | putative DNA‑binding transcriptional regulator/tryptophanyl‑tRNA synthetase |
| Reads supporting (aligned to +/- strand): ref base T (35/27); new base . (13/15); total (48/42) |
| Fisher's exact test for biased strand distribution p-value = 4.94e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.32e-01 |
ATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCGCCACAAAACCAATC > NC_000913/3512461‑3512658
|
aTAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCAt > 2:2151453/1‑100 (MQ=255)
tAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCAtt > 2:769250/1‑100 (MQ=255)
tAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCAtt > 2:748116/1‑100 (MQ=255)
aaaaaaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCAtact > 1:644528/1‑97 (MQ=255)
aaaaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACtt > 1:588095/1‑100 (MQ=255)
aaaaCCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA‑TACttt < 2:1852021/100‑1 (MQ=255)
gggTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA‑TACTTTGTAGGc > 1:1035198/1‑100 (MQ=255)
gggTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA‑TACTTTGTAGGc > 2:155931/1‑100 (MQ=255)
ggTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA‑TACTTTGTAGGcc > 1:2146497/1‑100 (MQ=255)
tttCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGcc > 1:901930/1‑99 (MQ=255)
tttCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA‑TACTTTGTAGGCCgg < 1:507902/100‑1 (MQ=255)
tCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCCATATGTCCATTACTTTGTAGGcc > 2:1781979/1‑97 (MQ=255)
tCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGa < 1:1070599/100‑1 (MQ=255)
ccccGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGAt > 1:269694/1‑100 (MQ=255)
ccccGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA‑TACTTTGTAGGCCGGATa > 1:376534/1‑100 (MQ=255)
cccGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATa < 2:1189573/100‑1 (MQ=255)
cccGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA‑TACTTTGTAGGCCGGATaa > 1:879767/1‑100 (MQ=255)
cccGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA‑TACTTTGTAGGCCGGATa > 1:2105678/1‑99 (MQ=255)
ccGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATaa > 2:2041515/1‑100 (MQ=255)
ggTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAgg < 1:1602524/100‑1 (MQ=255)
ttCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGt > 2:1330586/1‑100 (MQ=255)
ttCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGt > 2:1984092/1‑100 (MQ=255)
tCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA‑TACTTTGTAGGCCGGATAAGGCGTTc < 1:2120928/100‑1 (MQ=255)
tCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA‑TACTTTGTAGGCCGGATAAGGCGTTc < 1:846646/100‑1 (MQ=255)
cAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTc > 2:525093/1‑100 (MQ=255)
agagTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCa < 1:213996/100‑1 (MQ=255)
gagTGATGATAAAAGCAAAATTGCCTTATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCAc > 1:800057/1‑100 (MQ=255)
gagTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA‑TACTTTGTAGGCCGGATAAGGCGTTCAcg > 1:2190014/1‑100 (MQ=255)
gatgatAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCAcgccg < 2:1649167/100‑1 (MQ=255)
atgatAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA‑TACTTTGTAGGCCGGATAAGGCGTTCACGCCGCa < 2:644528/100‑1 (MQ=255)
atAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCAcgccgaa > 1:2237869/1‑96 (MQ=255)
aaaaGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTCCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATcc < 2:2063620/99‑1 (MQ=255)
aaGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA‑TACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCa < 2:801827/100‑1 (MQ=255)
aaGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA‑TACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCa > 2:1527855/1‑100 (MQ=255)
aGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCa < 2:282332/100‑1 (MQ=255)
gCAAAATTGCCTTATGCGTTACGCTTATCAGGCCTACATTTCCTTGCAAGATGTGCATTACTTTGTAGGCCGGATGCGGCGTGAACGCCTTATCCGGcc < 1:1761532/99‑2 (MQ=21)
gCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAt > 2:87946/1‑100 (MQ=255)
gCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA‑TACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATg > 1:710423/1‑100 (MQ=255)
cAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA‑TACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGa < 1:1499442/100‑1 (MQ=255)
aaaaTTGCCGGATGCGCTACTCTTATCAGGCCTACATTACATTGCAATATGTGCATTACTTTGTAGGCCAGATAAGGCGATCACGCCGCATCCGGc > 2:1369230/1‑96 (MQ=37)
aaaTTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGaa < 1:1722481/100‑1 (MQ=255)
ttGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA‑TACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACaaa < 1:1783276/100‑1 (MQ=255)
gCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAg > 2:193960/1‑100 (MQ=255)
gCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCCGCATGAACAAAg < 1:1472493/100‑1 (MQ=255)
tGATGCGCTACGCTTATCAGGTCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAgcgc < 1:679358/100‑1 (MQ=255)
gATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCa > 2:1518524/1‑100 (MQ=255)
gATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCa > 1:1743089/1‑100 (MQ=255)
aTGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCaa > 1:716751/1‑100 (MQ=255)
gcgcTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAAtt < 2:1049265/100‑1 (MQ=255)
gcTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTg < 2:1642706/100‑1 (MQ=255)
gcTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTg < 1:922091/100‑1 (MQ=255)
gcTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA‑TACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAAttt > 1:1844736/1‑98 (MQ=255)
gcTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA‑TACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGc > 2:1444044/1‑100 (MQ=255)
tACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCA‑TACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCa < 2:1915891/100‑1 (MQ=255)
cGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTGACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAg < 2:1199458/100‑1 (MQ=255)
cGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAg < 1:2151468/100‑1 (MQ=255)
cTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGc < 1:1961319/99‑1 (MQ=255)
cTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCa > 2:1257041/1‑100 (MQ=255)
cTTATCAGGCCTACATTTCCTTGCAATATGTGCA‑TACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCaa < 1:1115619/100‑1 (MQ=255)
tATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCTAGCAAt > 1:412188/1‑100 (MQ=255)
tATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAAt < 1:882104/100‑1 (MQ=255)
aTCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGAAATTTGCCAGTAATa > 1:138700/1‑100 (MQ=255)
tCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAACAg < 1:2062213/100‑1 (MQ=255)
cAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGt > 2:619663/1‑100 (MQ=255)
aGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTg < 1:1110433/100‑1 (MQ=255)
ggCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGa > 2:1586080/1‑100 (MQ=255)
ggCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGa > 2:1352104/1‑100 (MQ=255)
ggCCTACATTTCCTTACAATATGTGCATTACTTTGTAGGCCGGATAAGGCGATCACGCCACATACGTCATGCAGAAAGTGCAATTTGGCAGCAATAg > 2:854136/1‑97 (MQ=21)
ccTACATTTCCTTGCAATATGTGCA‑TACTTTGTAAGCCGGATAAGGCGTTCACGCCCCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGatgg > 2:577818/1‑97 (MQ=25)
cTACATTTCCTTGCAATATGTGCATTACTTTGTAGTCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGaa > 2:169686/1‑98 (MQ=255)
tACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTa > 1:592568/1‑100 (MQ=255)
tACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTa > 2:1581528/1‑100 (MQ=255)
tACATTTCCTTGCAATAGGTGCA‑TATTTTGTAGGTCGGATAATGCGTTCACGCTTCATCCGGCATTAACAAATTGTAATTTGCCAGCAATAGTGAATTa < 2:854838/99‑1 (MQ=21)
aCATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCTATTTGCCAGCAATAGTGAATTAc < 2:708/100‑1 (MQ=255)
aCATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTAc > 2:197795/1‑100 (MQ=255)
aCATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTAc < 1:619663/100‑1 (MQ=255)
cATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCCATAATGAATTAc > 1:1304061/1‑99 (MQ=255)
tttCCTTGCAATATGTGCA‑TACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCt < 2:1035196/100‑1 (MQ=255)
tCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCtt > 1:2104927/1‑100 (MQ=255)
ccTTGCAATATGTGCA‑TACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCg < 1:883628/100‑1 (MQ=255)
cTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCg > 2:1448323/1‑100 (MQ=255)
ttGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCg < 1:1787283/99‑1 (MQ=255)
ttGCAATATGTGCA‑TACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCGc < 2:2146482/99‑1 (MQ=255)
tGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCGcc < 2:1325500/100‑1 (MQ=255)
gCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCGCca > 1:242386/1‑100 (MQ=255)
cAATATGTGCA‑TACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCGCcaca > 1:1834705/1‑100 (MQ=255)
atGTGCA‑TACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCGCCACAAAAc < 2:1900250/100‑1 (MQ=255)
tgtgCATTACTTTGTAGGCCTGATAAGGCGTTCACGCCGTATCCGGCATGAACAAAGCGCAATTTGCTAGCAATAGTGAATTACGGCTTCGCCACAAAAc < 2:363944/100‑1 (MQ=255)
tgtgCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCGCCACAAAAc > 1:1481709/1‑100 (MQ=255)
tgtgCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCGCCACAAAAc > 1:1052554/1‑100 (MQ=255)
gCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCGCCACAAAACCaa > 2:248085/1‑100 (MQ=255)
gCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCGCCACAAAACCaa > 2:851131/1‑100 (MQ=255)
aTTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGCACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCGCCACAAAACCAATc < 1:660372/100‑1 (MQ=255)
aTTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCGCCACAAAACCAATc < 2:1663343/100‑1 (MQ=255)
|
ATAAAAAAACCGGGTTTCCCCGGTTTCAGAGTGATGATAAAAGCAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCGCAATTTGCCAGCAATAGTGAATTACGGCTTCGCCACAAAACCAATC > NC_000913/3512461‑3512658
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
