Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F212 I0 R1
|
246 |
122.0 |
6097616 |
93.1% |
5676880 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,307,386 |
A→T |
100% |
D410E (GAT→GAA) |
yojI ← |
microcin J25 efflux ABC transporter permease/ATPase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,307,386 | 0 | A | T | 97.8%
| 367.7
/ ‑1.6
| 114 | D410E (GAT→GAA) | yojI | microcin J25 efflux ABC transporter permease/ATPase |
| Reads supporting (aligned to +/- strand): ref base A (1/2); new base T (55/56); total (56/58) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 |
Only 100 of 114 total aligned reads displayed.
CGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCTGACAGGTTTGCCATCCAGCAAGATTTCG > NC_000913/2307289‑2307482
|
cGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTc < 1:2374661/100‑1 (MQ=255)
gTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCa < 1:241371/100‑1 (MQ=255)
gTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCa > 1:2676937/1‑100 (MQ=255)
ttGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCaa > 1:2622725/1‑100 (MQ=255)
ttGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCaa < 1:2319573/100‑1 (MQ=255)
cTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACa > 1:1645092/1‑100 (MQ=255)
cTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACa > 1:2849840/1‑100 (MQ=255)
cTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGACCCCAGCAGTTGTTCAAACa > 1:2713169/1‑100 (MQ=255)
cTTAACTCAAGCTTATGAGCCATTTTCAGCTGCACCAGCCACTTCTCAATCAGTTGCGGGTTAGCGGGTTGACCCTCCGGCCCCAACAGTTGATCGAACa > 2:879574/1‑100 (MQ=255)
tAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGc > 2:228799/1‑100 (MQ=255)
aaCTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGcc < 2:365582/100‑1 (MQ=255)
aaCTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGcc < 1:1710845/100‑1 (MQ=255)
aCTCAAGCTTATGAGCCATTTTCAGCTGCACCAGCCACTTCTCAATCAGTTGCGGGTTAGCGGGTTGACCCTCCGGCCCCAACAGTTGATCGAACAGCCa < 1:879580/100‑1 (MQ=255)
cTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAgatcg > 2:2364494/1‑96 (MQ=255)
cTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAg < 1:651011/100‑1 (MQ=255)
cTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAg > 1:2596861/1‑100 (MQ=255)
cTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAg > 1:2407806/1‑100 (MQ=255)
tCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCan < 2:2964472/99‑2 (MQ=255)
tCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGa < 1:294073/100‑1 (MQ=255)
tCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGa > 1:380325/1‑100 (MQ=255)
cAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCCGTTGCGTGTTAGCGGCTTAATCCTCCAGCCAAAGCAATTGTTTAAACAGCCAg > 1:115596/1‑98 (MQ=255)
cAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTACTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGAc > 1:2138520/1‑100 (MQ=255)
accTTATGATCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTATCGGTTTTACCCTCCGGCTCCATCAGTTTTTCAAACAGCCAGACa < 2:616362/97‑1 (MQ=255)
cTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATc < 1:602197/99‑1 (MQ=255)
ttATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCgg < 1:1383211/100‑1 (MQ=255)
naTGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCACCAGCAGTTGTTCAAACAGCCAGACATCgg > 2:948137/2‑99 (MQ=255)
aTGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCACCAGCAGTTGTTCAAACAGCCAGACATCGGTa > 1:1204164/1‑100 (MQ=255)
tGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTaa < 2:1197752/100‑1 (MQ=255)
gAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTaaa > 2:3010949/1‑100 (MQ=255)
gAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAATTGTTCAAACAGCCAGACATCGGTaaa > 1:1293444/1‑100 (MQ=255)
gAGCCACCTTCAGCTGCGCCAGCCACTACTTAACTAGTGGCGGGTTAGCGGCTTTAGCCTGCGCCTTTAGCAGTTGTTCTAACAGCCAGACATCGGTaaa > 2:1938184/1‑100 (MQ=255)
aGCCATTTTCAGCTGCGTCAGCCATTTTTTTACCAGTTGCGGGTTAGCGTGTTTACTCTTCGGACCCAGCAGTTGTTCAAACAGCCAGACATCGGTaaa < 1:22227/99‑1 (MQ=255)
gCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAaca < 1:1207600/100‑1 (MQ=255)
gCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAaca < 2:584281/100‑1 (MQ=255)
gCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAaca > 2:905170/1‑100 (MQ=255)
cATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGTTTTACCATCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACt > 2:1065515/1‑100 (MQ=255)
cATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACt > 1:2463930/1‑100 (MQ=255)
cATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACt > 1:52344/1‑100 (MQ=255)
cATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACt < 1:2761461/100‑1 (MQ=255)
tttCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGcc < 1:1208167/100‑1 (MQ=255)
ttCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCg > 2:255995/1‑100 (MQ=255)
tCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGa < 1:589536/100‑1 (MQ=255)
aGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGaaa > 2:1182007/1‑100 (MQ=255)
aGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGaaa > 2:1529850/1‑100 (MQ=255)
gCTGCGCCAGCCACTTCTCAACCAGTTGCGGG‑TAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGAGATCGGTAAACACTGCCGAAAAc < 2:1759431/100‑1 (MQ=255)
cTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAAc < 1:1843692/100‑1 (MQ=255)
cTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAAc > 1:1565405/1‑100 (MQ=255)
cgcCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAAc < 2:2474020/97‑1 (MQ=255)
gccagccaCTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGtt > 2:1143568/1‑100 (MQ=255)
cagccaCTTCTCAACCAGTTGCGGGTTAGCGGGATTGCCCTCAGAACCGAGAAGTATTTCAAACAGCCAGACATAGGTAAACACAGCCGACAACAGt > 2:2831904/1‑97 (MQ=255)
cagccaCGTCTCAACCAGTTGCGGGTTAGCTAGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGttt < 2:332681/99‑1 (MQ=255)
agccaCTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGc > 2:386953/1‑100 (MQ=255)
gccaCTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCg > 2:2690037/1‑100 (MQ=255)
gccaCTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCg > 2:1403467/1‑100 (MQ=255)
ccaCTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGa > 1:1895558/1‑100 (MQ=255)
caCTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGTCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGAt < 2:2672741/100‑1 (MQ=255)
aCTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATa > 2:1712207/1‑100 (MQ=255)
tctcAACCATTTGCGGGTTATCGGGTTTATCCTCCGGCCCTAGTAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATc < 1:939669/100‑1 (MQ=255)
tctcAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATc < 2:168016/100‑1 (MQ=255)
ctcAACCAGTTGCGGATTAGCGGATTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAACCGCTGCCGAAAACAGTTTGCGATAATc > 2:1804555/1‑99 (MQ=255)
cAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCGAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTc > 2:1933569/1‑100 (MQ=255)
cAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTc > 1:895564/1‑100 (MQ=255)
cAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTc > 1:2953034/1‑100 (MQ=255)
aaCCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTcc < 2:373455/100‑1 (MQ=255)
aaCCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTc > 2:2858513/1‑99 (MQ=255)
aaCCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACACTTTGCGATAATCTTcc > 2:840899/1‑100 (MQ=255)
aaCCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACAACGGTAAACACTGCCGAAAACAGTTAGCGATAATCTTcc < 2:1868821/100‑1 (MQ=255)
aCCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCg > 1:2646141/1‑100 (MQ=255)
cAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGgt < 2:1559840/100‑1 (MQ=255)
cAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGgt < 2:2622693/100‑1 (MQ=255)
gTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGgttg > 1:870407/1‑100 (MQ=255)
ttGCTGTTTAGCTGGTTTACCTTTTGGTCTCAGTAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGgttgt < 1:1496498/100‑1 (MQ=255)
tGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGgttgtt < 2:2493882/100‑1 (MQ=255)
gCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTc > 1:982748/1‑100 (MQ=255)
cGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTcg > 1:2442801/1‑100 (MQ=255)
ggTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCGAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGAGAATCTTCCGGTTGTTcgcc < 2:1517737/100‑1 (MQ=255)
ggTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTcgcc < 1:1645499/100‑1 (MQ=255)
gTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTcgccg > 1:2400712/1‑100 (MQ=255)
ttAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTcgccgc < 1:742052/100‑1 (MQ=255)
tAGCGGGTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCt < 1:2328763/100‑1 (MQ=255)
gggTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCTGACa < 1:1933592/100‑1 (MQ=255)
ggTTTACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCTGACAg > 1:1249307/1‑100 (MQ=255)
tttACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCTGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCTGACAGGt < 1:2248535/100‑1 (MQ=255)
tttACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCTGACAGGt > 1:2119207/1‑100 (MQ=255)
ttACCCTCCGGCCCCAGCAGGTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCTGACAGGtt < 2:975164/100‑1 (MQ=255)
tACCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCTGACAGGttt > 2:933392/1‑100 (MQ=255)
aCCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCTGACAGGTTTg > 2:120582/1‑100 (MQ=255)
aCCCTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCTGACAGGTTTg < 2:1645073/100‑1 (MQ=255)
cccTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCTGACAGGTTTGc < 1:3010982/100‑1 (MQ=255)
cccTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCTGACAGGTTTGc > 2:2713997/1‑100 (MQ=255)
cccTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCTGACAGGTTTGc < 2:1565387/100‑1 (MQ=255)
cccTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACAGCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCTGACAGGTTTGc > 1:2142881/1‑100 (MQ=255)
ccTCCGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCTGACAGGTTTGcc < 2:415914/100‑1 (MQ=255)
ccGGCCCCAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCTGACAAGTTTGCCATc > 2:1228820/1‑100 (MQ=255)
cccAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCTGACAGGTTTGCCATCCAGCa > 2:357766/1‑100 (MQ=255)
ccAGCAGTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCTGACAGGTTTGCCATCCAGCaa > 2:161821/1‑100 (MQ=255)
gcagTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCTGACAGGTTTGCCATCCAGCAAGAt < 1:2702349/100‑1 (MQ=255)
cagTTGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCTGACAGGTTTGCCATCCAGCAAGAt < 1:729163/99‑1 (MQ=255)
gTTGATCGAACAGCCAGACATCGGTAAACACTGCCGTAAACGGTTTGCTATAATCTTCCGGTTGTTCGCCGATGTCAGCTTTGCCATCCAGCAAGATTTc < 2:1224278/100‑1 (MQ=255)
ttGTTCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCTGACAGGTTTGCCATCCAGCAAGATTTcg < 2:840841/100‑1 (MQ=255)
|
CGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTTGTTCGCCGCTGACAGGTTTGCCATCCAGCAAGATTTCG > NC_000913/2307289‑2307482
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
