Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F204 I0 R1
|
247 |
174.3 |
8556966 |
94.2% |
8060661 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,281,279 |
A→T |
55.0% |
A216A (GCA→GCT) |
yejH → |
putative ATP‑dependent DNA or RNA helicase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,281,279 | 0 | A | T | 55.0%
| 41.1
/ 207.8
| 154 | A216A (GCA→GCT) | yejH | putative ATP‑dependent DNA or RNA helicase |
| Reads supporting (aligned to +/- strand): ref base A (39/29); new base T (40/44); total (81/73) |
| Fisher's exact test for biased strand distribution p-value = 2.56e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.14e-01 |
Only 100 of 159 total aligned reads displayed.
GCTGCCGCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATGGAGTTTGCT > NC_000913/2281183‑2281378
|
gCTGCCGCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCag < 2:3534634/100‑1 (MQ=255)
gCTGCCGCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCag < 2:3534970/100‑1 (MQ=255)
gCTGCCGCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCag < 2:176758/100‑1 (MQ=255)
gCTGCCGCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACag < 2:1092816/100‑1 (MQ=255)
gCCGCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGt > 2:4240994/1‑100 (MQ=255)
gCCGCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGt > 2:706655/1‑100 (MQ=255)
gCCGCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGt > 2:526126/1‑100 (MQ=255)
cGCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTaa < 2:4086909/100‑1 (MQ=255)
cTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACg < 2:1381992/100‑1 (MQ=255)
cGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGc < 2:328583/100‑1 (MQ=255)
gTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCt > 2:1561519/1‑100 (MQ=255)
tataTGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGt > 2:15356/1‑100 (MQ=255)
tataTGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGt < 1:2091272/100‑1 (MQ=255)
tatGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTc > 1:1641952/1‑100 (MQ=255)
tGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAg > 1:2802503/1‑100 (MQ=255)
tGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAg < 1:702427/100‑1 (MQ=255)
tGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAg > 1:2221635/1‑100 (MQ=255)
tGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAg > 1:3747376/1‑100 (MQ=255)
tGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAg < 2:1146793/100‑1 (MQ=255)
gATTCAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGc < 1:3263412/100‑1 (MQ=255)
gATTAAACACGGCTCTCTGACGCCGCTAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAg < 1:2315814/99‑1 (MQ=255)
gATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAg > 2:1475899/1‑99 (MQ=255)
ttAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTCCAGCCGCTTGCAGGCCCAGAGTAACGGGCTGTTCAGCGa > 2:2477614/1‑100 (MQ=255)
aaCACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGc > 2:3190880/1‑100 (MQ=255)
aaCACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGc < 2:3763766/100‑1 (MQ=255)
cGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGAt > 1:3763263/1‑100 (MQ=255)
cGGCTATCTGACGACGCCAGAACGACTGGATATGCCAGCAGTGCAATACGATTTCAGCCGCTTGCAGGCTAAGAGTAACGGGCTGTTCAGCGAAGCCg > 1:2640697/1‑98 (MQ=255)
ggCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGAtc < 1:839316/100‑1 (MQ=255)
ggCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGAtc < 2:818882/100‑1 (MQ=255)
ggCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGAtc < 2:3862437/100‑1 (MQ=255)
ggCTAGCTGACGCCGCAAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGAt < 1:2032863/99‑1 (MQ=255)
gCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGAtct < 1:50479/100‑1 (MQ=255)
gCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGAtct < 2:1304499/100‑1 (MQ=255)
cTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGAtctc > 1:312144/1‑100 (MQ=255)
tCTGACGCCGCCAGAACGACTGGATATACCAGTAGTGCAGTACGATCTCAGCTGCTGGCAGGCACAGAATAACGGGCTGTTCCGCGAAGCCGATCTCAAc > 1:1798535/1‑100 (MQ=255)
aCGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTg < 2:194035/100‑1 (MQ=255)
gccgccAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAg < 2:1641957/100‑1 (MQ=255)
cctccAGATCGCCTTGATATTCCAGTAGTGTATTACGATGTCAGCCGCGCGCAGGCTCACAGTAACGGGCTATTCCGCGAAGCCGATCTCACCCGTGAGc < 1:1087959/97‑1 (MQ=255)
ccgccAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGc > 1:1588790/1‑100 (MQ=255)
cgccAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCt < 1:885132/100‑1 (MQ=255)
gccAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTAAGCGAAGCCGATCTCAACCGTGAGCTg > 2:1049357/1‑100 (MQ=255)
gccACAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTATCGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCt < 1:455180/99‑1 (MQ=255)
gAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGaaaa < 2:2067844/100‑1 (MQ=255)
gAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGaaaa < 2:2547139/100‑1 (MQ=255)
aCGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCGGaaaaaa < 2:2240974/100‑1 (MQ=255)
ngACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAaac > 2:1534846/2‑100 (MQ=255)
cGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAaac < 2:1890675/100‑1 (MQ=255)
taCTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAaaca < 1:3435653/99‑1 (MQ=255)
gACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAaaca > 2:1395210/1‑100 (MQ=255)
cTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAaacaac < 2:1679762/100‑1 (MQ=255)
ggATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAaacaacaa > 1:1620308/1‑100 (MQ=255)
tGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTAt > 2:2755164/1‑100 (MQ=255)
tGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTAt < 2:3916837/100‑1 (MQ=255)
gCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTAtt > 1:1199550/1‑100 (MQ=255)
gCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAAAAGAAAAAAAAAAAAACAACAACGTAtt < 1:3234513/100‑1 (MQ=255)
cAGTAGTGCAATAAGATTTCAGCCGCTTGCAGGCTCAGAGAAACAGGCTGTTCAGCGAGGCTGATCTTAAAAAAAAAAAAAAAAAACAACAACGTAtt < 1:425215/98‑1 (MQ=255)
tagtGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTAcccc < 2:4175685/100‑1 (MQ=255)
tagtGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTAcccc < 2:900957/100‑1 (MQ=255)
tagtGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTAcccc < 2:4169642/100‑1 (MQ=255)
tagtGCAATACGATTTCAGCCGATTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTAcccc < 1:2889660/100‑1 (MQ=255)
agtGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTAcccc > 1:2627296/1‑99 (MQ=255)
gtGCAATACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGc > 2:2150728/1‑100 (MQ=255)
tGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGca < 1:2361544/100‑1 (MQ=255)
gCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGcac > 2:3345640/1‑100 (MQ=255)
gCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGcac > 2:814172/1‑100 (MQ=255)
gCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGcac > 1:3206285/1‑100 (MQ=255)
gCAATACGATTTCAGCCGCTTGCAGACTCATAGTAACGGGCTGTTCATCTAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGcac > 1:1478805/1‑100 (MQ=255)
cAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGcaca < 2:192448/100‑1 (MQ=255)
cAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGcaca < 2:2724010/100‑1 (MQ=255)
aaTACGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCAcat > 2:562888/1‑100 (MQ=255)
cGATTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACatcatc < 1:3283316/100‑1 (MQ=255)
aTTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAg < 2:1686242/100‑1 (MQ=255)
aTTTCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAg > 2:3632018/1‑100 (MQ=255)
ttCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGcc > 1:924080/1‑100 (MQ=255)
ttCAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGcc < 2:2640706/100‑1 (MQ=255)
tCAGCCGCTTGCAGGCACAGAGTAACGGGCTCTTCAGCGAAGCCAATCTCAACCGTGAACGGAAAAAACAACAACGTATTACCCCGCACATCAACAGc > 1:1717779/1‑98 (MQ=255)
cAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGcc > 1:1444743/1‑98 (MQ=255)
cAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAg > 2:857095/1‑100 (MQ=255)
cAGCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAg > 2:933965/1‑100 (MQ=255)
cAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAg < 1:1179924/100‑1 (MQ=255)
gCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGAt > 2:2035982/1‑100 (MQ=255)
gCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGAt > 2:742008/1‑100 (MQ=255)
gCCGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGAt > 1:2866404/1‑100 (MQ=255)
gCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGAt > 1:3663243/1‑100 (MQ=255)
cGCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTa < 2:2749787/100‑1 (MQ=255)
cGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTa > 1:1154476/1‑100 (MQ=255)
cGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTa > 2:1315016/1‑100 (MQ=255)
cGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTa < 1:2018658/100‑1 (MQ=255)
ncTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGAatat > 1:1533686/2‑100 (MQ=255)
gCTTGCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTAt > 1:663315/1‑100 (MQ=255)
tGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATGGa > 1:718563/1‑100 (MQ=255)
gCAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATGGAg < 2:675248/100‑1 (MQ=255)
gCAGGCTCAGAGGAACGGGCTGTTCAGCGAGGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATGGAg < 1:3553505/100‑1 (MQ=255)
cAGGCTCAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACACCGCACATCATCAGCCAGATTATGGAGt > 1:3980715/1‑100 (MQ=255)
ggCTCAGAGTAACGGGCTGTTCAGCGAAGCCGAACTCAACCGTGAGCTGAAAAAACCACGACGTATTACCCCGCACATCATCAGCCAGATAACGGAGt > 1:403333/1‑98 (MQ=255)
ggCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATGGAGttt > 1:2248319/1‑100 (MQ=255)
cacaGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATGGAGTTtgc > 1:1821843/1‑100 (MQ=255)
acaGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATGGAGTTtgct < 1:668811/100‑1 (MQ=255)
acaGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATGGAGTTtgct < 2:2412318/100‑1 (MQ=255)
acaGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAAACGTAAAATAAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATGGAGTTtgct < 1:1644342/100‑1 (MQ=255)
|
GCTGCCGCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATGGAGTTTGCT > NC_000913/2281183‑2281378
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
