Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A13 F103 I0 R1 1593 59.4 2889406 94.0% 2716041 140.5

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,986,841 T→A 13.2% intergenic (+121/‑78) PP_5245 → / → kefB‑III AraC family transcriptional regulator/glutathione‑regulated potassium/H+ antiporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,986,8410TA13.2% 145.3 / 11.2 60intergenic (+121/‑78)PP_5245/kefB‑IIIAraC family transcriptional regulator/glutathione‑regulated potassium/H+ antiporter
Reads supporting (aligned to +/- strand):  ref base T (25/25);  new base A (6/2);  total (32/28)
Fisher's exact test for biased strand distribution p-value = 2.63e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGTCCTCGCCGTCCCCCT  >  NC_002947/5986703‑5986989
                                                                                                                                           |                                                                                                                                                    
ggTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGACAATCATCTGACgggaa                                                                                                                                            <  1:50118/149‑5 (MQ=255)
   gAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTc                                                                                                                                                     >  1:292516/1‑137 (MQ=255)
   gAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTc                                                                                                                                                     <  2:292516/137‑1 (MQ=255)
     aCAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTAc                                                                                                                                       <  8:140397/149‑1 (MQ=255)
           cGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCtta                                                                                                                                 >  5:115686/1‑147 (MQ=255)
           cGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCtta                                                                                                                                 <  2:262521/149‑3 (MQ=255)
            gATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGACTGACGCCACACTACCCCt                                                                                                                                   >  5:99863/1‑146 (MQ=255)
              ttAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGaa                                                                                                                              <  2:190991/149‑1 (MQ=255)
                       ccTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTc                                                                                                                     <  3:3762/149‑1 (MQ=255)
                         ttcttcGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCa                                                                                                                    >  7:64211/1‑148 (MQ=255)
                         ttcttcGCGGGCGAGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCtta                                                                                                                                 >  6:124846/1‑133 (MQ=255)
                         ttcttcGCGGGCGAGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCtta                                                                                                                                 <  5:124846/135‑3 (MQ=255)
                          tcttcGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGCGGCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCa                                                                                                                    >  1:281264/1‑148 (MQ=255)
                               gcgGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGtt                                                                                                             <  6:115686/149‑1 (MQ=255)
                               gcgGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGAACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGtt                                                                                                             <  7:193303/149‑1 (MQ=255)
                                         ccGCTCCCACAGAGATATCACAGTACTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCAGTCAGATGATTGACTGACGACACACTAc                                                                                                                                       <  4:236207/113‑1 (MQ=255)
                                         ccGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTc                                                                                                                         >  1:237828/1‑127 (MQ=255)
                                         ccGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTc                                                                                                                         <  2:237828/127‑1 (MQ=255)
                                         ccGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATATTTCTTCCCGTCAGATGATTGACTGACGACACACTAc                                                                                                                                       >  3:236207/1‑113 (MQ=255)
                                             tCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCg                                                                                               >  8:52090/1‑149 (MQ=255)
                                             tCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGACTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCg                                                                                               >  3:124148/1‑149 (MQ=255)
                                               ccACAGAGATAGCACATGCCTTGAGCCCAGGTAAGC‑GCCGTCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCg                                                                                               <  3:262419/147‑1 (MQ=255)
                                               ccACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCgg                                                                                              <  4:166151/148‑1 (MQ=255)
                                               ccACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGc                                                                                             >  2:112171/1‑149 (MQ=255)
                                                 acaGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAg                                                                                           >  3:347603/1‑149 (MQ=255)
                                                        tAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATgg                                                                                    <  4:347603/149‑1 (MQ=255)
                                                          gCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGa                                                                                   <  8:64211/148‑1 (MQ=255)
                                                          gCACAGGCCTTGACCCCAGGTAAGC‑GCCGGGACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTCCCCCGGCAGCTCATGGa                                                                                   <  3:277962/148‑1 (MQ=255)
                                                           cacaGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGAc                                                                                                                                                 <  7:326586/85‑1 (MQ=255)
                                                           cacaGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGAc                                                                                                                                                 >  2:340976/1‑85 (MQ=255)
                                                           cacaGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGAc                                                                                                                                                 >  8:326586/1‑85 (MQ=255)
                                                           cacaGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGAc                                                                                                                                                 <  1:340976/85‑1 (MQ=255)
                                                            acaGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTa                                                                                >  6:244363/1‑149 (MQ=255)
                                                            acaGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTa                                                                                <  2:217976/149‑1 (MQ=255)
                                                                gCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAg                                                                            >  7:279848/1‑149 (MQ=255)
                                                                   ttGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCACTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGcc                                                                          >  6:201054/1‑148 (MQ=255)
                                                                           aGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCcaca                                                                 >  3:69927/1‑149 (MQ=255)
                                                                                          aCCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGACTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTc                                                   <  6:99863/149‑1 (MQ=255)
                                                                                             gATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTg                                                 >  2:89679/1‑148 (MQ=255)
                                                                                              aTTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGCCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGc                                                >  2:292793/1‑148 (MQ=255)
                                                                                               ttttaaCTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGc                                                          <  7:340674/132‑1 (MQ=255)
                                                                                               ttGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCACGGCAGATCATGGAGTACGAGCCAATGCAACACGAAGGc                                                          >  8:340674/1‑137 (MQ=255)
                                                                                                 gTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCaaa                                             <  5:244363/148‑1 (MQ=255)
                                                                                                     ctctGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACcgcg                                        >  8:128448/1‑149 (MQ=255)
                                                                                                     ctctGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACcgcg                                        >  1:309877/1‑149 (MQ=255)
                                                                                                               gacaATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTcc                              >  5:164483/1‑149 (MQ=255)
                                                                                                               gacaATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCATCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAAt                                                                       <  7:236933/108‑1 (MQ=255)
                                                                                                               gacaATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCATCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAAt                                                                       >  8:236933/1‑108 (MQ=255)
                                                                                                                  aaTTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTGGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTc                               >  6:265391/1‑145 (MQ=255)
                                                                                                                  aaTTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTTGGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTc                               <  5:265391/145‑1 (MQ=255)
                                                                                                                  aaTTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCATAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGc                           >  5:168634/1‑149 (MQ=255)
                                                                                                                    tttttCTTCCGGTCTGATGATTGTCTGACGCCACTCTACCCCTTAGAATTGTCCGTCATACTGTTCGAAGGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCtt                         <  6:168634/149‑1 (MQ=255)
                                                                                                                          ttcCCGTCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACAGCGGTGATCTTCCTGCTTgccgcc                   >  6:325248/1‑149 (MQ=255)
                                                                                                                          ttcCCGTCAGATGATTGACTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTgccgcc                   >  3:321719/1‑149 (MQ=255)
                                                                                                                                tCAGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGTCCTc             <  2:309877/149‑1 (MQ=255)
                                                                                                                                  aGATGATTGTCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGTCCTCGc           <  8:279848/149‑1 (MQ=255)
                                                                                                                                  aGATGATTGCCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGTCCTCGc           <  1:292793/149‑1 (MQ=255)
                                                                                                                                   gatgatTGACTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGTCCTCGcc          >  4:319994/1‑149 (MQ=255)
                                                                                                                                    atgatTGTCTGACGCCACACTACCCCTTAGAATTGTACGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTATGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGTCCTCGCCg         >  7:228344/1‑149 (MQ=255)
                                                                                                                                        ttGACTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCACTGCAGCTCATGGAGTACGACCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTACTCCTTGACGCCGTCCTCGCAGTccc     >  6:217862/1‑149 (MQ=255)
                                                                                                                                           tCTGACGCCACACTACCCCTTAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGTCCTCGCCGTCCCCCt  >  8:285333/1‑149 (MQ=255)
                                                                                                                                           |                                                                                                                                                    
GGTGAACAGTCCGATTAGCGCTGCCTTCTTCGCGGGCGCGCCCGCTCCCACAGAGATAGCACAGGCCTTGAGCCCAGGTAAGC‑GCCGGCACCGATTGTCACTCTGGACAGGACAATTTTTCTTCCCGTCAGATGATTGTCTGACGCCACACTACCCCTCAGAATTGTCCGTCAAACTGTTCGAACGCTGCCCCGGCAGCTCATGGAGTACGAGCCAATGCCACACGAAGGCAGCCTTCTGCAAACCGCGGTGATCTTCCTGCTTGCCGCCGTCCTCGCCGTCCCCCT  >  NC_002947/5986703‑5986989

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A