Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
559,654 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 559,654 | 0 | G | C | 98.3%
| 400.7
/ NA
| 176 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (89/83); minor base A (3/0); total (92/84) |
| Fisher's exact test for biased strand distribution p-value = 2.48e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
| * | CP042583 | 559,655 | 0 | C | G | 97.7%
| 389.3
/ NA
| 176 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/3); new base G (91/81); total (92/84) |
| Fisher's exact test for biased strand distribution p-value = 3.49e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 559,656 | 0 | T | A | 98.9%
| 388.8
/ NA
| 176 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (92/81); minor base G (0/2); total (92/84) |
| Fisher's exact test for biased strand distribution p-value = 2.24e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 176 total aligned reads displayed.
TGGCAAACCACGCCACGGGCGCAAAGCTGGATAAACGCATCACCGCCAGCA‑TCGTGCCCCACAAA‑AT‑ACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAAGCTCT‑CCCAGGCATGGGCACTGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTGCTGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCACTGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGGCTCTGAATCGCGGCGCGTACCTGTTCGCAAACACGGG‑CGGCGGTAAACAGCC > CP042583/559378‑559931
|||
tGGCAAACCACGCCACGGGCGCAAAGCTGGATAAACGCATCACCGCCAGCA‑TCGTGCCCCACAAA‑AT‑ACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCa > 1:1001765/1‑289 (MQ=255)
tGGCAAACCACGCCACGGGCGCAAAGCTGGATAAACGCATCACCGCCAGCA‑TCGTGCCCCACAAA‑AT‑ACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCa < 1:514624/289‑1 (MQ=255)
tGGCAAACCACGCCACGGGCGCAAAGCTGGATAAACGCATCACCGCCAGCA‑TCGTGCCCCACAAA‑AT‑ACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACAAACACCAGCGTAAATGCGGTAAAAGACC‑CCCAGGCa > 2:781944/1‑289 (MQ=255)
cAAACCACGCCACGGGCGCAAAGCTGGATAAACGCATCACCGCCAGCA‑TCGTGCCCCACAAA‑AT‑ACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATg < 1:311015/288‑1 (MQ=255)
aaaCCACACCACGCGCGCAATCCAGGGAACACGCATCACCCGCAGCA‑TCGAGCCCCACAAA‑AT‑ACCATGCACTACCGCCGGTACGGTGATTGTCAGGGTGATCACAAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAAGGGAACACCAGTCAAACTCGTACATTAGTTGCCCCCCATGTTACCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACAAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATggg < 2:845503/289‑1 (MQ=255)
aCCACGCCACGGGCGCAAAGCTGGATAAACGCATCACCGCCAGCA‑TCGTGCCCCACAAA‑AT‑ACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCACCGTAATGGCGGTAAACGACC‑CCCCGGCAAGGGcg > 2:940083/1‑288 (MQ=255)
gggCGCAAAGCTGGATAAACGCATCACCGCCAGCA‑TCGTGCCCCACAAA‑AT‑ACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGa > 2:319053/1‑289 (MQ=255)
gcgcAAAGATGGATAAACGCATCACCGCCAGCA‑TCGTGCCCCACAAA‑CT‑ACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAg < 1:294633/288‑1 (MQ=255)
gcAAAGCTGGATAAACGCATCACCGCCAGCA‑TCGTGCCCCACAAA‑AT‑ACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCa < 1:319053/288‑1 (MQ=255)
cAAAGCTGGATAAACGCATCACCGCCAGCA‑TCGTGCCCCACAAA‑AT‑ACCAATCACTACCGCCGTGACGGTGATTTTCAGGGCGATCACAAGCCCGTCGAGCAGATTTGGCAGGGAAGGGACAATGGAACTCCAGACAAACTCGCACATTATTTGCACCCCATGTTGCAAGGCACGCGAACCTTACGTTCAACCAGCGTCCTCCCCAGCATGAGAAAAGAGTTAATCAAAACATACGACAGAGTAATGGCGGTCAACCACT‑ACCAGGCCAGGGCAGAGTaaactcgcata > 2:1081446/1‑280 (MQ=255)
gagagaatcGCATCCCAGCCAG‑A‑TCAGGCCCCAAAAATAG‑CCCATTCACTGCCGCCGTGACGGTGATTGACGTGGTGATCACCAGCCCGTCGAGCAAGTAGTGCAGGGAAGGGACAATGGAACCCCATGCAAATTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTAcc < 2:54529/280‑1 (MQ=255)
ggATAAACGCATCACCGCCAGCA‑TCGTGCCCCACAAA‑AT‑ACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑ACCAGGCATGGGCTGAGTAATCGAGCAATTTAccc > 1:1247981/1‑288 (MQ=255)
actcccGCCAGCACCCGTGCACCCCAAA‑AT‑GCCAATACCTCCCGCCGGGCCGGTGATTTTCAGGGTGATCACCGGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCTTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGcgccg < 2:918212/285‑1 (MQ=255)
tccccgccgtcttCGCGCCCCAAAAC‑AT‑ACCACTCACTGCCGCCGGTCCGGTGATTTTCAGGGTGATCCCCAGCCCGGCGAGCAGAGATGGCAGGGAAGGGAAAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCgccgcc < 2:181705/277‑1 (MQ=255)
cAGCA‑TCGTGCCCCACAAA‑AT‑ACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGAAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATcc > 1:1177158/1‑288 (MQ=255)
gcctCGTGCCCC‑CAAA‑ATCACCAATCCCGACCGCCGTGACGGTGATTTTCAGGGTGCTCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATccacc < 2:727988/286‑1 (MQ=255)
a‑TCGTGCCCCACAAA‑AT‑ACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATccacc < 1:1351564/287‑1 (MQ=255)
a‑TCGGGCCCCACAAA‑AT‑ACCAATCCCAACCGCCGTGACGGTGATTTTCAGGGGGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATccac < 2:397133/286‑1 (MQ=255)
gTGCCCCACAAA‑AT‑ACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGAcc > 1:909321/1‑289 (MQ=255)
gTGCCCCACAAA‑AT‑ACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGGCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACA‑CCCAGGCATGGGCAGAGTAACTCAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGAc > 2:891042/1‑288 (MQ=255)
ccccACAAA‑AT‑ACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATCTCCACCAGACCGAt > 1:824354/1‑289 (MQ=255)
ccccACAAA‑AT‑ACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGAt > 1:295843/1‑289 (MQ=255)
a‑aT‑ACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGtcgag > 1:1576515/1‑284 (MQ=255)
aCCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCCGGCATGGGCTGAGTAATCGAGCAATTTACCCCCCTTCGCCCCCATATCCACCAAACCGAAAggcgaggcga > 2:1792485/1‑280 (MQ=255)
aCCAATCACTACCGCCGTGACGGGAATTTTCAGGGGGATCCCCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACAAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGtcgaggcga < 1:1266654/289‑9 (MQ=255)
cAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGctgag < 1:648426/229‑5 (MQ=255)
tcccTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCg < 1:1829687/286‑1 (MQ=255)
tcacacccgccgTGACGGGGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCg < 1:1035300/283‑1 (MQ=255)
tCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCg > 1:1919847/1‑289 (MQ=255)
aCTCCCGCCGGGACGGTGCTTTTCAGGGTGCTACCCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACCCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGAAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGa < 2:568415/270‑1 (MQ=255)
cgTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTc > 1:1557233/1‑288 (MQ=255)
tGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCAc > 1:697076/1‑288 (MQ=255)
ttttCAGGGTGAACACCAGCCCGTAGCGCAGATAGGGAAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCAAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTtcat < 2:1868274/288‑1 (MQ=255)
cAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCAtct < 1:1792485/289‑1 (MQ=255)
gTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCAtctctg < 1:1247001/288‑3 (MQ=255)
gTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCAtctct < 1:89893/287‑2 (MQ=255)
aTCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCAtctctgagg > 2:1160307/1‑283 (MQ=255)
gCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCCCCAGACCGATCGTCGAGGCCATGGCCGCGTTTTTCACCAGGTTCATCATCTCCGAGGTCACcgg > 2:1812650/1‑288 (MQ=255)
cccGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCAc > 1:108602/1‑260 (MQ=255)
cccGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCAc < 2:108602/260‑1 (MQ=255)
cGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCggg > 1:532858/1‑289 (MQ=255)
cGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGAc < 1:1259996/288‑1 (MQ=255)
atGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGGAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGGCGAGGCGATGGCGGAGTGTTTCAACAGGTTCATCCTCCCTGAGGTCATCGGCGGGCCGAAAA‑ggcca > 2:220708/1‑287 (MQ=255)
tGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGAt < 1:76355/289‑1 (MQ=255)
gggaagggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCa > 1:974468/1‑289 (MQ=255)
ggaaggaaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCa < 1:511642/288‑1 (MQ=255)
gaagggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCAtt > 1:1890953/1‑289 (MQ=255)
gaagggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCCCTGAGGTCATCGGCGGGGCGATAACCGCGACAGGCAt > 2:177815/1‑289 (MQ=255)
gaagggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGCTTTTCACCAGGTTCATCACCTCTGAGGTCATCGGCGGGGCGGTAA‑CGCGATAAGCact > 2:491030/1‑287 (MQ=255)
ggggaAAAGGGAACGCCAGACAAACTCGTACATTATTGCCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTAAACCAGCGTCATCACCAGAATGATAAAAGCGTTAAGCAACACGTACGCCAGCGTAAGGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTa < 2:236760/287‑1 (MQ=255)
agggaCAATGGACCCCCATTAAAACTCGCACATTATTTGCCCCCCATGTTGACAGGAAGGCAACCTTTACGTTCAACCAGCGTCATCACCAGCAGTATAAAAGCTTTAATAAACACATACGCAAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTa < 2:1114875/288‑1 (MQ=255)
agggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTa < 1:1618296/288‑1 (MQ=255)
agggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTa < 1:727994/288‑1 (MQ=255)
ggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGCACGATAGTCGAGGCGATGGCGGAGTTGTTCACCAGGTTCATCCTCCCTGAGGTCATCGGCGGGACGAAAA‑CGCGATAAACAGTAGgc > 2:561879/1‑289 (MQ=255)
caaggtaaCGCCAGTAAAACTCTTACATTATTTTCCCACCAGGTGGCCAGGAAGGCCAACTTTACGTTCAACCAGCGTCATCACCAGAATGATAAAAGCGTTAATCAACACATACGCCCGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGgcag < 2:1565250/282‑1 (MQ=255)
aTGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGcagcag > 1:236760/1‑289 (MQ=255)
aTGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTAATCGGCGGGACGATAA‑CGCGATAAGCATTAGGcagcag > 1:1159365/1‑289 (MQ=255)
tGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGc < 1:1745424/144‑1 (MQ=255)
tGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGc > 2:1745424/1‑144 (MQ=255)
tGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGTTAAGCATTAGGCCCCAGt > 2:1265552/1‑289 (MQ=255)
tGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGt > 1:1628684/1‑289 (MQ=255)
agtCCGGTCAACCTCGTACATTTTTTGCCCCCCATTTTGCCAGGCAGGTGAACTTTACGTCACACCGGCGTAATAACCAGCAAGATAAAAGCGTTAATCAACCCATACGCCAGCGTAATGGCGGTAACCGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGt < 2:1247981/287‑1 (MQ=255)
accccAGTCAAGCCGGTAATTTATTTGCCCCCCTTGTTGCCAGGAAGGGGAACTTCACTTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGAAATGGCGGTAAACGCCT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGt < 2:1552467/286‑1 (MQ=255)
aCTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGAAGGCGGAGTTTTTCACCAGGTTCATCATCTCTGCGGTCATCGGCGGGCCGATAA‑CGCGATAAGCATTAGGCCGCAGTCCGt > 2:2797/1‑289 (MQ=255)
cTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATGAGCATTAGGCAGCAGTACGTa > 1:865728/1‑289 (MQ=255)
gTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTAAGGATAGAt > 1:1539939/1‑289 (MQ=255)
atCAAACTCGTCACTTTTTTGCCCCCCATGTAGCCGGGCAGGCGAACTGTACGTTCAACCAGCGTCATCACCAGAATGAAAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGAt < 1:1902222/288‑1 (MQ=255)
accccGTACATAATTTGACCCCCATGTTGCCAGGCAGGCGAACTTAACGTTAAACCGGCGTCATCACCAGCATAAAAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTAACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGc < 2:1001765/285‑1 (MQ=255)
aaCTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACTCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGc < 2:1009452/289‑1 (MQ=255)
cGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑ttc > 1:1551472/1‑287 (MQ=255)
ttACCTTATTTGCCCCCAAAGTGGCCAGGCAGGGGAACTTTACGTTCAACCACGGTCAACACAGGAATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTCCCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCg < 2:1114276/288‑1 (MQ=255)
acatattttGCACCCCAGGTTGCACGGCAGACGACCTATACGTTCAACCAGCGTAAACACACGCATGTAAAAAGCGTAAATCAACACCTACGCCAGCGTAATGGCGGAAAACGACT‑CCCCGGCATGGGCTAAGTAATCGACCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCgg < 2:606201/282‑1 (MQ=255)
tttGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTc > 1:1073227/1‑289 (MQ=255)
gCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCCGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGt < 2:1402821/263‑1 (MQ=255)
gCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAAAGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCCTATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTCCATCATCCCTGAGGTCCTCGGCGGGACGATGA‑CGGCAGAAGCATTAGTCACCAGGACGTTTGGATAAGCC‑TGCGGGAGTGTTAg > 2:351593/1‑288 (MQ=255)
gCCCCCCATGTTGCCAGGCAGACGAACTTTACGTTCAACCGGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAgg < 1:1229943/289‑1 (MQ=255)
cccccATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGAAAAGCATTAGGCAGCAGGTAGTAACGAAAAGCCGTGC‑GTAGCGTCAGGc > 2:1758344/1‑288 (MQ=255)
ccATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCAt < 1:20036/289‑1 (MQ=255)
gCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGAc > 1:1121317/1‑219 (MQ=255)
ccAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAgc > 1:488731/1‑288 (MQ=255)
gAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑ttttt > 1:1707024/1‑289 (MQ=255)
cTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCC‑ttttttt > 1:1454529/1‑288 (MQ=255)
aGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGcc > 1:1797319/1‑222 (MQ=255)
tAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCCCTGAGGTCATCGGCGGGATGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑AGCGGTAGCGTCAGGCCCATCGCAAGCGCGGCAGTTTTTTTGCGCGC‑CGAGCGGCCCTGAATGGCGGcgcggg > 2:251903/1‑286 (MQ=255)
aaacggatgaaTCAACCAATACGCAAGCGTAATGGCGGTAAACGACT‑CCGAGGAATGGGCAGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGAACGATAGTCGAGGCGATGGCGGAGTGTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATATGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTAcc < 2:168690/280‑1 (MQ=255)
cGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCCCGGCC‑TTTTTTTTCCCTCTCGGCAGCCACTGAATCGCGgcgctcacccggt > 2:1753433/1‑279 (MQ=255)
tAATCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGGAACGATAAGCC‑TGCGGGAGCGCACGGCCCATCGCCCGCGCGGCA‑TTGTTTTTGCCTCGCGCCCGCGACTGACACGCAGCGCGCACCTTGTCGCa > 2:1143032/1‑289 (MQ=255)
aaTCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCCCCAGGTTCATCATCTCTGAGGTCATCGGCGGGCCGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGAGAAGCC‑TGCGGGAGCGTCAGGCCAATCGCCAGCGCGGCA‑TTTTTTTGCCCCCCGGGCAGCGACTGAATCGCGGCGCGTAGCTGTGCGCaa > 2:984772/1‑289 (MQ=255)
aaTCAACACATACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCAGCGGCGGGACGACAA‑CGCGATAAGCATTAGGCAGCAGTACGGATCGATAAGCC‑TGCGGTAGCGTCAGGACCATCGCCAGCCCGGCA‑GTGTGTTGCCCTCCCCGCACCGCCAGCATCGCGGGGCGTACCCGTTCGCa > 2:1936200/1‑288 (MQ=255)
aTACGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGgg‑cg > 1:1932807/1‑289 (MQ=255)
aCGCCAGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTGTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGGACCTGTTCGCAAACACGgg‑cggc > 1:1412043/1‑289 (MQ=255)
aGCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGGTAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCCGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCCGCGACCGAACCGCCGCGCGTACCCTTTCGTAAACCCGGGCcggcggaa > 2:302933/1‑287 (MQ=255)
gCGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCC‑TTTTTTTGCCCTCGCGGCAgcgactgaa > 1:1814259/1‑241 (MQ=255)
gCGAAATGGCGATAAACGACT‑CCCGAGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCACCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGG‑CGGCGGTaaa < 1:1375213/289‑1 (MQ=255)
cGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCC‑TTTTTTTTCCCTCCCCGCAGCGACTGCATCGCGGCGCGTACCTCTTCGCAAACCCCGG‑GCGCGGTaaaa > 2:1623998/1‑288 (MQ=255)
cGTAATGGCGGTAAACGACT‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACAAGGG‑CGGCGGTAAAc > 1:1782185/1‑289 (MQ=255)
cGTAAT‑GCGGTAAACCGCCCCCCGGGAATGGCCGCAGTAATCGACCAATTTCCCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGG‑CGGCGGTaaa < 2:473341/288‑1 (MQ=255)
gTAATGGCGGTAAACGACT‑CCCAGGCAT‑GGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGGGGTAACGGCAGGCCCCTCGCCCACGCGGCC‑ATTTTTTGTCCTCCAGGCAGCGCCTGAATCGCGGCGCGTACCTTGTTGCCAACACggggtgggggatacag > 2:1012256/1‑276 (MQ=255)
gTAATGGCGGTAAACGACC‑CCCAGGCATGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGG‑CGGCGGTaaa < 1:721010/287‑1 (MQ=255)
tAATGGCGGTAAACGACT‑CCCAGGCTTGGGCTGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGAGGATAA‑TCCCATCAGCATTAGGGATCATGACGTATCGGTAAGCC‑GTAGGTAGCGTCAGGCACATCGCGAGCGCGGCA‑TTTTTTTTCCCCCCGGGCAGGCACTGGATCCCCGGGCGGACCGGTTGCCAAATGCGGG‑CGGCGGGTAACAg > 2:120950/1‑289 (MQ=255)
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TGGCAAACCACGCCACGGGCGCAAAGCTGGATAAACGCATCACCGCCAGCA‑TCGTGCCCCACAAA‑AT‑ACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAAGCTCT‑CCCAGGCATGGGCACTGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTGCTGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCACTGGTCATCGGCGGGACGATAA‑CGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCC‑TGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTTGCCCTCGCGGCAGGCTCTGAATCGCGGCGCGTACCTGTTCGCAAACACGGG‑CGGCGGTAAACAGCC > CP042583/559378‑559931
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
