Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A23 F6 I1 R1
|
16 |
59.9 |
2107472 |
93.9% |
1978916 |
143.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913_3_pae_tpiA |
4,110,747 |
G→T |
intergenic (+62/+784) |
cdh → / ← yiiQ |
CDP‑diacylglycerol phosphotidylhydrolase/DUF1454 family putative periplasmic protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913_3_pae_tpiA | 4,110,747 | 0 | G | T | 99.0%
| 351.2
/ NA
| 104 | intergenic (+62/+784) | cdh/yiiQ | CDP‑diacylglycerol phosphotidylhydrolase/DUF1454 family putative periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base T (58/45); total (58/46) |
| Fisher's exact test for biased strand distribution p-value = 4.42e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 106 total aligned reads displayed.
GCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCGGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACGTCCTCTCCGCTCTCAATACCCGCCCCAG > NC_000913_3_pae_tpiA/4110601‑4110891
|
gCTGGCGACACCACGAAATCTACTGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAATTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAggctgc < 1:398256/149‑1 (MQ=255)
gCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAggctgc < 2:614085/149‑1 (MQ=255)
cTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACGTAAGGCTGcc > 1:319106/1‑149 (MQ=255)
tGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGACGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACATG‑TCAGACTTAAGACTGccc > 2:356693/1‑149 (MQ=255)
gCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCccg > 1:665200/1‑149 (MQ=255)
gACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCccgcc > 1:269820/1‑149 (MQ=255)
aaCGAAATCTACTGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAg > 2:247004/1‑149 (MQ=255)
aCGAAATCTACTGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTACGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCCAGc > 2:824320/1‑149 (MQ=255)
aCGAAATCTACTGACGCTTAACCGTGCCTCCGAGGGTAAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGc > 1:1043181/1‑149 (MQ=255)
tCTACTGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTc < 1:157229/149‑1 (MQ=255)
tACTGACGTGTAAACGTGCGTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGc < 2:13101/149‑1 (MQ=255)
caCTGACGCTTACCCGTGCTCCACCCGACGAAAGTCAGGATCATCAGCGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTCCCGGATATGAAATCCGGCACCTG‑TCACACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGc < 1:157145/148‑1 (MQ=255)
tGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCaa < 2:269820/149‑1 (MQ=255)
gACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAAt < 1:542092/149‑1 (MQ=255)
gCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCt > 1:96770/1‑149 (MQ=255)
gCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGAAGGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCt > 1:250675/1‑149 (MQ=255)
cTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCtc > 2:131007/1‑148 (MQ=255)
ttAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTaa < 1:707282/149‑1 (MQ=255)
ttAACCGTGCTTCAGCCGAGGAAATGCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATAAGAAATCAAGC‑CATGCTGGAACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTaa < 1:1037930/149‑1 (MQ=255)
ccGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATc > 1:29138/1‑149 (MQ=255)
gCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTaa < 2:565521/149‑1 (MQ=255)
ttCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTG‑CCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGat > 2:768834/1‑149 (MQ=255)
cAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTCAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGata < 2:439063/149‑1 (MQ=255)
cAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGata < 1:387699/149‑1 (MQ=255)
aaGCAGAGGAAATGCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGata < 2:558999/148‑1 (MQ=255)
aGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGatat < 1:567814/149‑1 (MQ=255)
ccggtgAAATTGAGGATCATCAGTGTGGGATTGTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATgg < 2:7877/144‑1 (MQ=255)
ccGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATgg < 1:66232/149‑1 (MQ=255)
ccGAGGAAATTCAGGATCAGCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATgg < 1:136177/149‑1 (MQ=255)
cGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATggg < 1:628569/149‑1 (MQ=255)
gAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGCTGCTGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCGCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGt > 1:514783/1‑149 (MQ=255)
aGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTC‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGACCTTAAGATATGGGTc > 1:938287/1‑149 (MQ=255)
aaTTCATGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCtttt < 1:594965/149‑1 (MQ=255)
aaTTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCtttt < 1:124797/149‑1 (MQ=255)
aaTTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCtttt > 1:852498/1‑149 (MQ=255)
aTTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATgg > 2:342978/1‑141 (MQ=255)
tCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGa > 2:646740/1‑105 (MQ=255)
cAGGATCATCAGTGTGAGATTTTGCATTAAGGCGAAGAGTTAAAGAAAGTAAGTGCCGGATATGAAATCTGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTGTCGCCAATTCTAAGATCTTACGATATGGGTCTTTTGcgt > 1:800581/1‑147 (MQ=255)
ggATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTc > 2:504962/1‑149 (MQ=255)
gATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGatat > 2:449117/1‑133 (MQ=255)
gATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGatat < 1:449117/133‑1 (MQ=255)
atcatcAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCAc > 1:906246/1‑149 (MQ=255)
atcaGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCtttt > 1:212717/1‑138 (MQ=255)
atcaGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCtttt < 2:212717/138‑1 (MQ=255)
atcaGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGc > 2:249034/1‑149 (MQ=255)
tgtgAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTgcgc > 1:985781/1‑149 (MQ=255)
tgAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATATTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCtt > 1:758699/1‑149 (MQ=255)
agaTTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGc < 1:688961/149‑1 (MQ=255)
ttGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCCCCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGACTTCACTGCTGCGCTTGCCAGCa > 1:465232/1‑149 (MQ=255)
tGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCaa < 2:250675/149‑1 (MQ=255)
tGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCaa < 2:117320/149‑1 (MQ=255)
gTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAacac > 1:648874/1‑149 (MQ=255)
ttAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACt > 1:419976/1‑149 (MQ=255)
aaGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTcc > 1:946116/1‑149 (MQ=255)
aGGCGCAAAGTTAAGGAAAGTAAGTGCCGTATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTCTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTccc < 1:273745/149‑1 (MQ=255)
aGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTccc > 2:1032766/1‑149 (MQ=255)
aGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTccc < 2:992083/149‑1 (MQ=255)
ggCGAAGAGTTAAGGAAAGTAAGTTCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTcccc < 1:69747/149‑1 (MQ=255)
ggCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTcccc > 1:24375/1‑149 (MQ=255)
cGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTc > 2:553414/1‑149 (MQ=255)
gAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCg < 1:520508/149‑1 (MQ=255)
aaGAGTTAAGGAAAGTAAGTGCCGGATATGAAAGCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGt < 2:991847/149‑1 (MQ=255)
gagaTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTGTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGc < 1:727965/149‑1 (MQ=255)
agTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGcc > 1:709762/1‑149 (MQ=255)
gTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTCCCg > 2:297918/1‑149 (MQ=255)
ttAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGACAATTCTAAGATCTTAAGATATGGGGCTTTTGCGTTTTCGTCTGCGGTTGCCAGCAACACTCCCCTCGTGCCGa > 1:721107/1‑149 (MQ=255)
aaGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGt < 2:912581/149‑1 (MQ=255)
aGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGTCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGtt < 1:791199/149‑1 (MQ=255)
aGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGtt > 1:211334/1‑149 (MQ=255)
aGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGAGCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGtt < 2:171600/149‑1 (MQ=255)
aGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACGTAAGGCTGCCCCGCCGCGAGCGGGTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGtt > 2:120168/1‑149 (MQ=255)
ggAAAGTAAGTGCCGGATATGTAACCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGttt < 1:765386/149‑1 (MQ=255)
taagtGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAATATCTTAAGATATGGGTCTTTTGCCTTCACGGCCGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAgcgc < 2:408870/149‑1 (MQ=255)
aagtGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGTGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGcgcg < 1:879524/149‑1 (MQ=255)
gtGCCGTATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGc < 2:775650/149‑1 (MQ=255)
tGCCGGATTTCATATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTCCGCTTGCCAGCAACACTCCCCTCGTGCCGACTTTAAGCGCGGCt > 2:1014040/1‑149 (MQ=255)
gCCGTACATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAATATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCtt < 2:161067/149‑1 (MQ=255)
ccGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCaa > 1:752208/1‑116 (MQ=255)
ccGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCaa < 2:752208/116‑1 (MQ=255)
cGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCa > 1:50359/1‑149 (MQ=255)
atatGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGtt < 1:591023/132‑1 (MQ=255)
atGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACGTc < 1:102556/149‑1 (MQ=255)
tGAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACGTcc > 1:819395/1‑149 (MQ=255)
gAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGCGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCCCGGCTGCGCTTGCCAGCCACCCTCCCCTCGTGCCGAGTTTAAGCGGGGCTTCACCGTCct > 2:743741/1‑149 (MQ=255)
gAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACGTCct > 2:8096/1‑149 (MQ=255)
gAAATCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACGTCct > 2:743725/1‑149 (MQ=255)
aaaTCCGGCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACGTCctc > 1:773813/1‑149 (MQ=255)
aTCCGGCACCTG‑TCACTCTGACGGCGGGCGCGGCGCGTGCGGTTTCGCCAATTCTAAGAGGCTATGTTCTGGGTCGTTTGTGTTCAGGTCTGCGCTTGTCAGCAACACCCCCCTCGGGCCCAGTTTAAGCGCGGTGTCAACGTCCtctc < 2:455995/149‑1 (MQ=255)
ggCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTATTTTGCCGTTACGGCGGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACGTCCTCTccccc > 2:379525/1‑146 (MQ=255)
ggCACCTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGAATCATTTGCATTCAGGGCATCCCGGCCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACGTCCTCTCCGct < 1:247004/149‑1 (MQ=255)
ccTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACGTCCTCTCCGCTCTCa < 2:960141/149‑1 (MQ=255)
cTG‑TCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACGTCCTCTCCGCTCTCaa > 1:562430/1‑149 (MQ=255)
g‑TCAGACTTAAGGCTGCCCCGCAGCGCCCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACGTCCTCTCCGCTCTCAAtc > 2:646677/1‑148 (MQ=255)
tCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGCGTTTAAGCGCGGCTTCAACGTCCTCTCCGATCTCAATAc > 2:82293/1‑149 (MQ=255)
tCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACGTCCTCTCCGCTCTCAAtcc > 1:385309/1‑147 (MQ=255)
tCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACGTCCTCTCCGCTCTCAAtcc > 1:59976/1‑147 (MQ=255)
tCAGACTTAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACGTCCTCTCCGCTCTCAATAc > 1:385764/1‑149 (MQ=255)
ttAAGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCACCTCGTGCCGAGTTTAAGCGCGCCTTCAACGTGCCCTCTGCTCTCAATACCCGccc > 1:716079/1‑149 (MQ=255)
aaGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACGTCCTCTCCGCTCTCAATACCCGCCCCa < 1:28597/149‑1 (MQ=255)
aGGCTGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACGTCCTCTCCGCTCTCAGTACCCGcccccg > 1:819767/1‑147 (MQ=255)
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GCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAAGGCGAAGAGTTAAGGAAAGTAAGTGCCGGATATGAAATCCGGCACCTG‑TCAGACTTAAGGCGGCCCCGCCGCGAGCGGTTTCGCCAATTCTAAGATCTTAAGATATGGGTCTTTTGCCTTCACGGCTGCGCTTGCCAGCAACACTCCCCTCGTGCCGAGTTTAAGCGCGGCTTCAACGTCCTCTCCGCTCTCAATACCCGCCCCAG > NC_000913_3_pae_tpiA/4110601‑4110891
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
