Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A10 F54 I0 R2 227 88.8 3424874 95.5% 3270754 127.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP006881 2,801,996 G→A 100% A327T (GCC→ACC)  U712_14440 → UPF0118 membrane protein ytvI

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068812,801,9960GA98.2% 202.8 / ‑6.2 67A327T (GCC→ACC) U712_14440UPF0118 membrane protein ytvI
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base A (31/33);  minor base C (3/0);  total (34/33)
Fisher's exact test for biased strand distribution p-value = 2.39e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

TTACGGGCCAGCTGCCCCAAGCAATCGGAATTGGTATCCTGTACCTCGTCGTTCTTATTCAGCGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCGCCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCATTAAAAGAAATATGGTC  >  CP006881/2801868‑2802108
                                                                                                                                |                                                                                                                
ttACGGGCCAGCTGCCCCAAGCAATCGGAATTGGTATCCTGTACCTCGTCGTTCTTATTCAGCGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGc                                                                                                        <  2:347733/139‑1 (MQ=255)
ttACGGGCCAGCTGCCCCAAGCAATCGGAATTGGTATCCTGTACCTCGTCGTTCTTATTCAGCGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGc                                                                                                        <  2:243985/139‑1 (MQ=255)
gtACGGGCCAGCTGCCCCAAGCAATCGGAATTGGTATCCTGTACCTCGTCGTTCTTATTCAGCGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGc                                                                                                        <  2:163363/138‑1 (MQ=255)
              ccccAAGCAATCGGAATTGGTATCCTGTACCTCGTCGTTGTTTTTAAGCGGCAGCTGACAGAGCCCAAAAAACTAAGTAAATCGATCGGGATCCATCCGCAGGCAACACTCATCACCCGGTTTTCCGGCGTTAAattat                                                                                          >  2:164991/1‑139 (MQ=255)
                  aaGCAATCGGAATTGGTATCCTGTACCTCGTCGTTCTTATTCAGCGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCgg                                                                                      <  1:271193/139‑1 (MQ=255)
                  aaGCAATCGGAATTGGTATCCTGTACCTCGTCGTTCTTATTCAGCGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCgg                                                                                      <  8:252970/139‑1 (MQ=255)
                  aaGCAATCGGAATTGGTATCCTGTACCTCGTCGTTCTTATTCAGCGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCgg                                                                                      <  1:320707/139‑1 (MQ=255)
                  aaGCAATCGGAATTGGTATCCTGTACCTCGTCGTTCTTAATCAGCGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCgg                                                                                      <  7:314554/139‑1 (MQ=255)
                            aaTTGGTATCCTGTACCTCGTCGTTCTTATTCAGCGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGa                                                                            <  7:213268/139‑1 (MQ=255)
                             aTTGGTATCCTGTACCTCGTCGTTCTTATTCCGCGGCCGCTGCCAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGCTCCGCTGGCAACACTCATCCCCCAGGTTGCCGGCTGTAAATTATTAGGGTTTTTTGGAc                                                                           >  6:70551/1‑139 (MQ=255)
                                   aTCCTGTACCTCGTCGTGATTATTCAGCGGCAGCGGCCCCAGCCCAAGCAACTAAGGATATATATCGGGATCGATACCCGTGCAACACAGCTCCACCTGTATGCCGGCTTTAAATTATTGGGGGTTGTTGGTCTGATTg                                                                     >  8:197873/1‑139 (MQ=255)
                                      cTGTACCTCGTCGTTCTTATTCAGCGGCAGCTGACAGCGCCCAAGATACTAAGTAAATCTATCGGGTTCGATCCGCTGGCACCACTCATCACCCTGTTTGGCGGCTTTAAATTATTCGGGTTTTTAGGTCTGATTGCgg                                                                  >  6:296028/1‑139 (MQ=255)
                                         tACCTCGTCGTTCTTATTCAGCGGCCGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGCTCCGCTGGCCACACTCATCACCCGGTTTTCCGGCGTTAAATTATTAGGGGTTTTTGGCCTGATTTGGGGag                                                               >  7:151306/1‑138 (MQ=255)
                                         tACCTCGTCGTTCTTATTCAGCGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCggg                                                                 <  1:164991/137‑1 (MQ=255)
                                         tACCTCGTCGTTCTTATTCAGCGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGAc                                                               <  1:366695/139‑1 (MQ=255)
                                              cgtcgtTCTTATTCAGCGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCgg                                                                                      <  2:285249/111‑1 (MQ=255)
                                              cgtcgtTCTTATTCAGCGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCgg                                                                                      >  1:285249/1‑111 (MQ=255)
                                              cgtcgtTCTTATTCAGCGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCt                                                          >  7:147097/1‑139 (MQ=255)
                                              cgtcgtTCATATTCAGCGGCAGCTGACAGAGCCCAAGATTCTAATTAAAAATATCGGGTTCGATCCGCTGGCAACACTCAACAGCCAGGTTGCCGGCTTTAAATTATTAGGGTTTTTATGTCTGATTGCGGGACCgg                                                            >  6:71550/1‑137 (MQ=255)
                                                tcgtTGTTATTCAGCGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGGTCGATACGCTGGCAACCCTAATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTTGGTCTGATTGCGGGGCCGGCTg                                                         >  6:372733/1‑138 (MQ=255)
                                                tcgtTCTTATTCAGCGGCCGCTGACCGCGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCCAAACCCGGTTTGCCGGCGTTTAATTATTAGGGGTGTTAGGCCTGATTGCGGGACCGGCGGt                                                        >  7:154947/1‑139 (MQ=255)
                                                tcgtTCTTATTCAGCGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTg                                                         >  8:106699/1‑138 (MQ=255)
                                                           aaGCGGCAGCTGACAGAGCCCAAGATAATAAGTAAATATATAGGGATAGATCCGCTGGCAACACACATACCCCTGTTTGGCGGCTTTAAATTATTAGGGTTTTTAGGACTGATTGCGGGACCGGCGGGAATCGtca                                                >  4:147187/2‑136 (MQ=255)
                                                              cGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACCCTCATCACCCTGTTTGCAGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCatcatc                                           >  5:211918/1‑138 (MQ=255)
                                                              cGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGtcat                                               <  5:53243/134‑1 (MQ=255)
                                                              cGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGtcat                                               >  6:53243/1‑134 (MQ=255)
                                                              cGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCatcatc                                           >  6:312971/1‑138 (MQ=255)
                                                              cGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCatcatc                                           >  5:401168/1‑138 (MQ=255)
                                                              cGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCatcatc                                           >  7:319420/1‑138 (MQ=255)
                                                                 cAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGAc                                                               <  3:17563/115‑1 (MQ=255)
                                                                 cAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGAc                                                               >  4:17563/1‑115 (MQ=255)
                                                                        cAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGCTCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTtcat                                <  2:245153/139‑1 (MQ=255)
                                                                           agCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGGCATCATCCAAGCTTtcatca                              >  5:222199/1‑138 (MQ=255)
                                                                             cccAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTTTTTGCCGGCTTTAAATTATTCgg                                                                                      >  2:90922/1‑80 (MQ=255)
                                                                             cccAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTTTTTGCCGGCTTTAAATTATTCgg                                                                                      <  1:90922/80‑1 (MQ=255)
                                                                             cccAAGATACTAAGTAAATCAATCGTGATCGATCAGCTGGCAACACTAATCACCCTGTTTGCCGCCTTTAAATTATTCGGGTTATTAGGACTGATTGAGGGACCGGCTGTACTCGTCATCATCCAAGCATTCTTCacaa                           >  6:349326/1‑139 (MQ=255)
                                                                              ccAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCacaac                          >  8:57102/1‑139 (MQ=255)
                                                                              ccAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCacaa                           >  2:121870/1‑138 (MQ=255)
                                                                                 aGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAgg                       <  2:66019/139‑1 (MQ=255)
                                                                                  gATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCAGCATCCAAGCTTTCATCACAACAGgc                      >  1:283500/1‑139 (MQ=255)
                                                                                    tACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAgg                       >  4:75502/1‑136 (MQ=255)
                                                                                      cTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCAt                  <  5:203081/139‑1 (MQ=255)
                                                                                       tAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCggg                                                                 >  8:253319/1‑91 (MQ=255)
                                                                                       tAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCggg                                                                 <  7:253319/91‑1 (MQ=255)
                                                                                       tAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCAt                  <  2:37927/138‑1 (MQ=255)
                                                                                       tAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCAt                  >  1:37927/1‑138 (MQ=255)
                                                                                         aGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCATTaa               <  7:197873/139‑1 (MQ=255)
                                                                                          gTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCAt                  >  3:338173/1‑135 (MQ=255)
                                                                                              aTCTATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCATTAAAAGa           >  8:147431/1‑138 (MQ=255)
                                                                                                 tATCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCATTAAAAGAAata       <  6:401168/139‑1 (MQ=255)
                                                                                                   tCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCgg                                                            <  5:354073/84‑1 (MQ=255)
                                                                                                   tCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCgg                                                            >  6:354073/1‑84 (MQ=255)
                                                                                                   tCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCATTAAAAGAAata       <  5:70551/137‑1 (MQ=255)
                                                                                                   tCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCATTAAAAGAAata       <  2:303905/137‑1 (MQ=255)
                                                                                                   tCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCATTAAAAGAAata       <  7:106699/137‑1 (MQ=255)
                                                                                                   tCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCATTAAAAGAAATATg     >  8:228017/1‑139 (MQ=255)
                                                                                                   tCGGGATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCATTAAAAGAAATATg     >  1:303905/1‑139 (MQ=255)
                                                                                                     gggATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCATTAAAAGAAATATgg    <  7:147431/138‑1 (MQ=255)
                                                                                                     gggATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCATTAAAAGAAATATgg    <  2:368930/138‑1 (MQ=255)
                                                                                                     gggATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCATTAAAAGAAATATgg    <  2:283500/138‑1 (MQ=255)
                                                                                                      ggATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCATTAAAAGAAATATg     <  3:174369/136‑1 (MQ=255)
                                                                                                      ggATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCATTAAAAGAAATATg     >  3:174789/1‑136 (MQ=255)
                                                                                                      ggATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCATTAAAAGAAATATg     <  3:20440/136‑1 (MQ=255)
                                                                                                      ggATCGATCCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCATTAAAAGAAATATGGTc  <  8:151306/139‑1 (MQ=255)
                                                                                                       gatcgatcCGCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCATTAAAAGAAata       <  4:84673/133‑1 (MQ=255)
                                                                                                                gCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCg                                                   >  3:371536/1‑80 (MQ=255)
                                                                                                                gCTGGCAACACTCATCACCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCg                                                   <  4:371536/80‑1 (MQ=255)
                                                                                                                                |                                                                                                                
TTACGGGCCAGCTGCCCCAAGCAATCGGAATTGGTATCCTGTACCTCGTCGTTCTTATTCAGCGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTATCGGGATCGATCCGCTGGCAACACTCATCGCCCTGTTTGCCGGCTTTAAATTATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATCCAAGCTTTCATCACAACAGGCGCATTAAAAGAAATATGGTC  >  CP006881/2801868‑2802108

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A