Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F103 I1 R1
|
24 |
58.8 |
2490364 |
90.7% |
2258760 |
142.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC JC |
NC_000913 |
568,268 |
IS1 (–) +9 bp |
intergenic (+21/‑39) |
renD → / → emrE |
DLP12 prophage; protein RenD/multidrug/betaine/choline efflux transporter EmrE |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
19796 = | NA (NA) | 61 (0.890) |
53/280 |
0.2 |
100% |
noncoding (768/768 nt) |
IS1 |
repeat region |
| ? | NC_000913 |
= 568276 |
0 (0.000) | intergenic (+29/‑39) |
renD/emrE |
DLP12 prophage; protein RenD/multidrug/betaine/choline efflux transporter EmrE |
| * |
? |
NC_000913 |
= 258675 | NA (NA) | 56 (0.810) |
47/282 |
0.4 |
100% |
noncoding (1/768 nt) |
IS1 |
repeat region |
| ? | NC_000913 |
568268 = |
0 (0.000) | intergenic (+21/‑47) |
renD/emrE |
DLP12 prophage; protein RenD/multidrug/betaine/choline efflux transporter EmrE |
AGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/19938‑19796
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTAAAAATCAGATTCGTGCTCACCTTTCCTTCCCATTCTT < NC_000913/568276‑568135
acCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC < 1:219745/141‑1
AGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATCATCTGAACATAAAACACGATCAGTAAGTTGGAGTCATTACC > 2:17463/1‑143
GCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGAAAGAAGCAATTGACCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCT < 1:283226/143‑1
GCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGACCATAAAACACTATCAATAAGTTGGAGTCATTACCTACA > 1:811297/1‑143
AACCTGAATCTGAGGCATCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTT < 1:80919/143‑1
CTGAATCTGAGGCAGCACCTGGCACGGCTGGGTCGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAA < 1:837242/143‑1
CTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAg > 1:809482/1‑142
CTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGGCGTACTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAA > 2:1205866/1‑143
TGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACACAGTCATCGGGCATTATATTAACATAAAACACCATCAATAAGTTGGAGTCATTACGTACAGTTTAAAC > 2:432143/1‑143
TGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTAACTACAATTTGAAC > 2:395979/1‑143
GGCAGCACCTGGCACGGCTGGGCCGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCAC < 2:998627/143‑1
GCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTCCAGTTTGCACTCAACTCACC > 2:225471/1‑143
CAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCT > 1:666024/1‑143
AGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTG > 2:891499/1‑143
cCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCGCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCTTGAAGTTTGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTT < 2:1013186/142‑1
cggACGGCTGGGCCGGAAGTCGCTGTCGTTCGCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATACGTTGGAGTCCTAACCTACAGTTTGAACTCGACTCACCTGTTTCATC < 2:1153465/140‑1
GCAGGGCTGGGACGGAAGTCGCTGTGGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGAAATATATGAACATAAAACACAATAAATAAGATGGAGTCATTACCTACAGCATGAACGCAACTCAACTGCTTCATCA > 2:733869/1‑143
ACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATT > 2:1133317/1‑143
GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCCTTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGT > 2:871678/1‑143
ACGGAAGTCGCTGTCGTTCTCAAAATCGGTGACGCTGCCAAATACGGACATCGGGCATTATCTGAACATAACACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCA > 2:1013998/1‑143
ggcAGTCGCTGTCGTTCTCAAAAGCGGTGGAGCTGCATGACGAAGTCAGCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATT < 1:698256/140‑1
AAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCCGCATTGTGTTCCCATTGc > 2:303501/1‑142
TGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTT > 1:1084116/1‑143
TGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCAGTATCTGAACATAAAACACTAACAACAAGTTGGAGTCATTACCAACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTACCCATTGCTGATCTT > 2:386803/1‑143
GTCGTTCTCAAAAGCGGTGGAGCTACCTGAATACGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTT < 2:809482/143‑1
TCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATAC > 1:610872/1‑143
CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATTTACC > 1:695939/1‑143
CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACC > 1:329275/1‑143
GTGGAGATGCATGACAGAGTCATCGGGCATTATCTCAACATAAAACACTATCAATACGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACATGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATAC < 2:242718/143‑1
TGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGATAGTACTCAACCAACAGGATTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAAcgcc > 2:260816/1‑139
ggtGCTGCATGACATATTCATCGGTCATGATCTGAACATAAAACACTATCAATCAGCTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCC < 2:659364/140‑1
GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTACCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGC > 2:168407/1‑143
ACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAAATAACATGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCG > 1:284767/1‑143
TCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGG < 1:552382/143‑1
CGGGCATTATCCGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGC < 1:1050642/143‑1
GGGCATTATCTGAACAGAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCG < 1:86500/143‑1
GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTAAATACCCGTTTCATCGCGGCACTCTGGCGA > 2:457909/1‑143
GCATTATCTGAACATAAAACACTATCAATAAGTTGAAGTCATTACCTACAGTTTGAACTCAACTAACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACGCTGGCGAC > 1:1055701/1‑143
TATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTC < 1:1123601/143‑1
tTCTGAACATAAAATACTATCCATAAGTTGGACTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCC < 2:795506/142‑1
CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTT > 1:714031/1‑143
CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACACTCAGTACCCGTGACATCGCGGCACTCTGGCGACACacatc > 2:364250/1‑138
TGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCACCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGTCACTCTGGCGACACTCCTTA > 1:239406/1‑143
GAACATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTAA > 1:669412/1‑143
CATAAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTTATCGCGGCACCCTGGCGGCACTCCTTAAAAA > 1:367535/1‑143
TAAAACACTATCAACAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCCTTGTGTTCCCATTGATGTTCTTTGATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTAAAAATC < 1:286833/143‑1
AAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTAAAAGTCA > 1:213812/1‑143
AAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGAT < 2:817900/79‑1
AAAACACTATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGAT > 1:817900/1‑79
TATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTACCAATCAGATTCtt > 1:715202/1‑141
TATCAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTAAAAATCAAATTCct > 1:1134394/1‑141
CAATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTAAAAATCAGATTCGTGCT > 1:58093/1‑143
ATAAGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTGAAAATCCGATTCGTGCTCc > 1:280506/1‑142
AGTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGCCACTCCTTAACACTCAGATTCGTGCTCACCT > 2:502397/1‑143
GTTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTACAAATCAGATTCGTGCTCACCTc > 2:169038/1‑142
tgGGAGTCATTACCTACAGTGTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTAAAAATCAGATTCGTGCTCACCTTT < 2:57408/141‑1
TTGGAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGCTGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTAAAACTGAGATTCGTGCTCACgctt > 2:169547/1‑139
GAGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTAAAAATCAGATTCGTGCTCACCTTTCCT > 1:661364/1‑143
AGTCATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTAAAAATCAGATTCGTGCTCACCTTTCCTT < 1:542174/143‑1
ATTACCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTCTAGATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTAAACATCAGATCCGTGCTCCCCTTTCCTTCCCc > 1:1177275/1‑142
ATTACCTACAGTGTGAACTCAACTCACCTGGTTCATCATTGTGTTTCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTAAAAATCAGATTCGTGCTCACCTTTCCTTCCCA < 1:271540/143‑1
TACCTACAGTTTGAACTCAACTCACCTGGTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTAAAAATCAGATTCGTGCTCACCTTTCCTTCCCATT < 1:786376/143‑1
CCTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTAAAAATCAGATTCGTGCTCCCCTTTCCCTCCCATTCT > 1:778300/1‑143
CTACAGTTTGCACTCAACTCACCTGTTTCACCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTAAAAATCAGATTCGTGCTCACCTTTCCTTCCCATTCTT < 1:1205866/143‑1
CTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTAAAAATCAGATTCGTGCTCACCTTTCCTTCCCATCCTT > 2:950731/1‑143
AGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/19938‑19796
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTACAGTTTGAACTCAACTCACCTGTTTCATCATTGTGTTCCCATTGATGTTCTTTTATATACCCTCAATACCCGTTTCATCGCGGCACTCTGGCGACACTCCTTAAAAATCAGATTCGTGCTCACCTTTCCTTCCCATTCTT < NC_000913/568276‑568135
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
