Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F2 I0 R1
|
193 |
6708.0 |
8620653 |
98.5% |
8491343 |
136.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,056,951 |
C→A |
16.9% |
H134N (CAC→AAC) |
adk → |
adenylate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,056,951 | 0 | C | A | 16.9%
| 173.7
/ 3.1
| 127 | H134N (CAC→AAC) | adk | adenylate kinase |
| Reads supporting (aligned to +/- strand): ref base C (18/74); new base A (23/3); total (50/77) |
| Fisher's exact test for biased strand distribution p-value = 1.63e-10 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 132 total aligned reads displayed.
GCGTACCATTCCGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAC‑GTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGG > NZ_CP022686/4056812‑4057090
|
gcgTACCATTCCGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATc < 3:218759/140‑1 (MQ=255)
gcgTACCATTCCGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGGTCACGCGCCGTCTGGTCGTGTTTATc < 7:800980/140‑1 (MQ=255)
tACCATTCCGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTGTGGTCGTGTTTTTTAC‑g > 3:558283/1‑140 (MQ=255)
tACCATTCCGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAAcc > 5:212178/1‑139 (MQ=255)
aCCATTCCGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAC‑gg > 6:123163/1‑139 (MQ=255)
aCCATTCCGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAC‑Gt < 1:1028181/140‑1 (MQ=255)
aCCATTCCGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAC‑Gt < 2:1086150/140‑1 (MQ=255)
aCCATTCCGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATGAC‑Gt > 1:179313/1‑140 (MQ=255)
cATTCCGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTACCGCGCCGTCTGGTCGTGTTTTTCAC‑GTTa > 8:524594/1‑140 (MQ=255)
aatCCGCAGGCAGACGCGATGAAAGAAGCGGGCAACAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGATGACCTTATCGTAGGCCACCCCGTTCACCCGCCCTCTGCAAGTGTTTTTAAC‑GTTaa > 4:152173/3‑140 (MQ=255)
aTTCCGCAGGCAGACGCGATGAAAGAAGCGGGCAGCAATGTTGATTACGTTCTGGAATTCGAAGTACAGGACGAACTGATTGTTGACCGTATCGTAGGCAGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATGAC‑GTTaa > 4:152172/1‑140 (MQ=255)
ttCCGCAGGCAGCCGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCGGGTCGTGGGTTTCAC‑ggttaa > 6:139422/1‑135 (MQ=255)
ttCCGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTGAC‑GTTaaa > 7:951628/1‑140 (MQ=255)
ttCCGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAAccgaaaa > 2:1028181/1‑134 (MQ=255)
ttCCGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTAACGCGCCGTCTGGTCGTGTTTATCACTGTTaa > 2:98331/1‑140 (MQ=255)
caggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATACC‑GTTTAATTaaa > 5:82053/1‑140 (MQ=255)
caggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAAAAC‑GTTAAAATCaa > 3:283396/1‑140 (MQ=255)
caggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCCTTCACCCGCCGTCTGGTCGTGTTTATAAC‑GGTTAATTCaa > 5:622351/1‑140 (MQ=255)
caggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACAGTATCGTAGGCCGCCGCGTTCACGCGCCGTCAGGTCGTGTTTATAAA‑GTTAAAtaaaa > 3:424842/1‑136 (MQ=255)
aggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGTAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAC‑GTTAAATTCAAt < 3:776918/140‑1 (MQ=255)
aggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAC‑GTTAAATTCAAt < 4:613786/140‑1 (MQ=255)
gcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCAGGTCGTGGTTATAAC‑GTTAAATTTaaagc > 1:1107549/1‑137 (MQ=255)
agACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCCCGCGCCGTCTGGTCGTGTTTATCAC‑CGTAAAATAAATccgc > 1:667571/1‑140 (MQ=255)
cgcgATGAAAGAAGCGGGCAGCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAC‑GTTAAATTCAATCCGCCGa < 2:409629/140‑1 (MQ=255)
tGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCCCGCGCCGTCTGGTCGTGTTTATGAC‑GTTAAATTCAATCCGCCGaaattt > 7:327374/1‑137 (MQ=255)
catgCGGGCATCATTGTTTATTACGTTCTGGATTTCGACTTACGGGACGAACTTATTGTTGACCGTTTCGTAGGCCGCGGCTTTCACGCGCCGTCTGGTCGTGTTTATCAC‑GTTAAATTCAATCCGCCGAAATTAGAAgg < 4:867459/137‑1 (MQ=255)
agCGGGAATCAATGTTGATTCCGTTCTGTAATTCGAGGTACCGGACGAAGTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGACTGGTCGTGGTTATCAG‑GTTAAATTCAATCCGCCGAAAGTAGAAGGCa < 5:614057/140‑1 (MQ=255)
gCATCATTGTTGATTTCGTTCTGGATTTCGACTTACCGGACGAACTGATTGTTGACGGTATCGTTGGCCGCCGGGTTCACGCGCCGGCTGGTCGTGTTTATCAC‑GTTAAATTCAATCCGCCGAATGTAGAAGGCAAAgac < 6:880199/140‑1 (MQ=255)
gCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTAAC‑GTTAAATTAAATACGCCGAAAGTTGAAGGCAAAtac > 5:87425/1‑140 (MQ=255)
aaTGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTTTGAC‑GTTAAATTGATTACGCCGGAAGTAGAAGGCAAAgcccccgg > 7:259922/1‑133 (MQ=255)
tttGATTACGTTCTGGATTTCGACGTACCGGACTAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAG‑GTTAAATTCATTCCGCCTAAATTAGAAGGCAAAGACGACGTTAc < 1:982867/139‑1 (MQ=255)
gTTGATTACGTTCTGTAATTCGACGTACGGGACGAACTGATTGTTGACCGTTTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTTGTGTTTATCAC‑GTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTAc < 4:269424/140‑1 (MQ=255)
gTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCTTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAC‑GTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTAc < 4:452757/140‑1 (MQ=255)
tGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTGCACGCGCCGTCTGGTCGTGTTTAGCAC‑GTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCg < 8:844378/140‑1 (MQ=255)
aTTACGTTCTGGAATTCGCCGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTGGTCGTGTTTATCAC‑GGTAAATTCAATACGCCGAAATTATAAGGCAAAGACCAGGTTAcccgg > 8:436054/1‑137 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCTCGTTCACGCCCCGTCTGGTAGTGTTTATAAC‑GGTAAATTCAATCCCCCGCAAGTAGAAGGCCAAGACGACGTTACAGGt > 6:638083/1‑140 (MQ=255)
cGTTCTGGATTTCGACGACCCGTACGAACTTTTTGTTGACCTTATCGTCGGCCGCGGCGTTCACGCGCCGTCGGGTCGTGTTTATCAC‑GTTAAATTCAATCCGCCGAACGTAGAAGGCAAAGACGACGTTACCGGTgaag < 8:975393/140‑1 (MQ=255)
gTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGCCCGGATCGTAGGCCGCCGCGTTAACGCGCCGTCTGGGCGTGTTTAGGAC‑GTTTAATTCAATCCGCCGGAAGTTGTAGGGAAAGGCGACGTTACCggggcagt > 8:304819/1‑134 (MQ=255)
gTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAAC‑GTTAAATTCAATACGCCGAAAGTAGTAGGCAAAGACGACGGTACCGGTgaaga > 3:140687/1‑140 (MQ=255)
ttCTGTAATTCGACGTACCGGACTAAGTTTTTGTTCTCCTACTCGTTGGCCGCCGCGATCTCGCTCCGTCTGGTCGTGTTTATCAC‑GTTAAATTCATGCGGCCGAAAGTAGAAGGCAAAGACGACGTTACAGGTgaagaa < 4:831256/140‑1 (MQ=255)
ttCTGGAATACGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAC‑GTTAAATACACTCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTgaagaa < 3:1009367/140‑1 (MQ=255)
ggAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTTGTCGTGGTTATCAC‑GTTAAATTCAATCCGCCGAATCTAATAGGCAAAGACGAGATTACAGGTGAAGAACAGa > 8:749179/1‑140 (MQ=255)
gAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTAATCAC‑GTTAAATTCAATCCGCCGAAAGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGAc < 8:127022/140‑1 (MQ=255)
aaTTCGACGTCCCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCTTCTGGTCGTGTTAATCAC‑GTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACt < 2:688310/140‑1 (MQ=255)
aaTTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTCAC‑GTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACt < 2:898980/140‑1 (MQ=255)
aaTTCGACGTACCGGACCAACTGATTGTTGACCGTATCGTTGGCCGCCGCTTTCACGCGCCGTCTTGTCGTGTTAATCAC‑GTTAATTTCAATCCGCCGAAAGTATAAGGCAAACACGACGTTACCGGTGAAGAACTGACt < 8:552329/140‑1 (MQ=255)
ccGGAGCAACTGTTTGTTGACCGTATGGTAGGCCGCCGCGTTCAGGCGCCGTCTGGTCGTGTTTATCAC‑TTTAAATTCAATCCGCCTAAAGTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 1:1101538/140‑1 (MQ=255)
ccGGACTAACTGATTGTTGACCTTTTCGTAGGCCGCCGAGTTCACGCGCCGGCTGGTCGGTTTGATCAC‑GTTAAATTCAAGCCGCCGAAATTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 6:279882/140‑1 (MQ=255)
ccGGACGAACTGATTTTTGACCGTATCGTCGGCCGCCGCGTTCACGCGCCGTATGGTCGTTTTTTTCAC‑GTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 8:108199/140‑1 (MQ=255)
ccGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTGTGGTCGTGTTTCTCAC‑GTTAAATTCAATCCGCTGAAAGTATATGTAAAAGACTACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 8:523018/140‑1 (MQ=255)
gACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATACC‑GGTAAATTAAATACGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGGGAAGAACTGACTACCCCTAAAGACGa > 2:887682/1‑140 (MQ=255)
cctaaCTTATTGTGGACCGTATCGTAGGCCGCCGCGTGCACGCGCGGTCTGGGGGTGTTTATCAC‑GTTAAATTCAATCCGCGGAAATTAGAAGGCAATGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 3:485257/137‑1 (MQ=255)
actaaatGATTGTTGACCGTATCGTTGGCCGCCGCGTGCACGCGCCGTCTGGTCTTGTTTATCAC‑GTTAAATTCAATCCGCCCAAAGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 7:291785/134‑1 (MQ=255)
aCGAAGTGATTGTGTACCTTATCGTAGGCCGCCGGGGTCCCGCGCCGTCTGGTGGTGTTTACACC‑GTTAATTTCAATCCGCCGAAATTTGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 4:313424/140‑1 (MQ=255)
aCGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAC‑GTTAAATTAAATCCGCCGAAAGTAGAAGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 4:772793/140‑1 (MQ=255)
aCGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCGGGTCGTGTTTATCAC‑GTTAAATTCAATCCGCCTAAAGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 3:89028/140‑1 (MQ=255)
gATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTCAC‑GTTAAATTAAATCCGCCGAAAGTAGAATGCAAAAACGAAGTTAACGGTGAATAAATGACTACCCCTAAATACGATAAGGaat > 1:336007/1‑139 (MQ=255)
tttgttgACCGTATCGTTGGCCGCCGCGTTCACGCGCCGTCTGGTGGTGTTTATCAC‑GTTAAATTCAATCCGCCTAAAGTAGAAGTCTAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAaga < 2:78757/139‑1 (MQ=255)
ttgttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAAC‑CTTAAAATCAATACGCCCAAATTAGAAGGCAAAGACGACCGTACCCGTGAATAACAGACTACCCGAAAAAACAAACAGGaatca > 4:188137/1‑137 (MQ=255)
tgttgACCGTATCGTCGGCCGCCGGGTTCACGCGCCGTCTGGTCGTGTTTATCAG‑GTTAATTTAAATCCGCCGAATGTAGAGGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAgaga < 7:99556/140‑1 (MQ=255)
tgttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAA‑GGTAAATTAAAGCCGCCGTAAGTCGAACGAAAACACGACGGTACCGCGCAAGAACAGACGACCCCTAAACACCATCACGAagagc > 7:919850/1‑139 (MQ=255)
tgttgACCGTATCGTAGCCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAC‑GTTAAATTCAATCCGCCGAACGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAgaga < 8:762542/140‑1 (MQ=255)
ttgACCTTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAC‑TTTAAATTCAATCCGCCTAAATTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGAcc < 6:143209/140‑1 (MQ=255)
cGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTCAC‑GTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTTACGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcggacc > 6:895968/1‑139 (MQ=255)
gTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAC‑GGTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCCTAAAGACGATCAGGAAGAGACcgtacgt > 3:652273/1‑140 (MQ=255)
gTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATTGC‑GGTTAATTGAATCCGCCCAAAGGAGAAGGCAAAGACGACGGTACCGGTGAAGAACTGACTACCCGGAAAGACGAACAGGAAGTGACcgtacgt > 4:874357/1‑140 (MQ=255)
gTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATCAC‑GGTAAATTGAATCCGCCGAAAATAGAAGGCAAAGACGACCTTTCCGGGGAAGAACAGACTACCCGGAAAGCAGATCAGGAAGAGACcggacgt > 6:445121/1‑140 (MQ=255)
tttggTAGGCCGCCGCGTTCACGGGCCGTGGGGTGGTGTTTACCAC‑TTTAAATTAAATCCGCCGAAATTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtacgta < 5:9200/136‑1 (MQ=255)
tATCGTAGGCCGCCGCGGTCACGCGCCGGCTGGTCGTGTTAATCCC‑GTAAAATTAAATCCGCCGAAAGTAGACGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtacgta < 1:76790/140‑1 (MQ=255)
aTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATGAC‑GTTTAATTCAATACGCCGAAAATAGAAGGCAAATAAGACGTTACCGGTGAAGAACAGACAACACGTAAATAAGATCAGGAAGAGCCCCTACCTaa > 3:789977/1‑140 (MQ=255)
aTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAA‑GTTAAATTAAATACGCCGAAATTAGAAGGCAAAGACGACGGTACCGGGGCATAACGTACTTACCCTAAAGACGATCATGAAGAGACCGAACGTaa > 3:278075/1‑140 (MQ=255)
aTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAAC‑GTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACAACGTTACCGGTGAAGAACAGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTaa > 6:809808/1‑140 (MQ=255)
cggCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAC‑GTAAAATTCAATCCGCCGAAATTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 4:737096/139‑1 (MQ=255)
agccggccggGTTCACGAGCCGTCGGTTCGTTTTTATCAC‑GTTAAATTCAATCCGCCTAAAGTAGAAGCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 6:367981/135‑1 (MQ=255)
aGGCCGCCGCGTTCACGCGCGGTCTGGTCGTGTTTATCAC‑GTTAATTTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 6:637770/140‑1 (MQ=255)
aGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAC‑GTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 4:469825/140‑1 (MQ=255)
cgccgcGTTCACGCGCCGTCTGGTCGTGTTAATCAC‑GTTAAATTCAATCCGCCGAAAGTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGt < 2:209865/140‑1 (MQ=255)
cgccgcGTTCACGCGCCGACTGGTCGTGTTTATCAC‑GTTAAATTCAATCCGCCGAAAGTACAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTACAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGt < 6:251005/140‑1 (MQ=255)
gctttCACGCGCCGTCTGTCGGTTTTTATCAC‑TTTAAATTCAATCCGACGAAAGTACAAGGCAACGACGACGTTTCCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGaa < 1:478388/137‑1 (MQ=255)
gcgTTAACGCGCCGGCTGGTCGTGTTTATCAC‑GGTAAATGCAATCCGCCCAAAGTAGAAGGCAACCACGACGGTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGaa < 6:860728/140‑1 (MQ=255)
tgTTCACGGGCCGTCTTGTGGTGTTTATCAG‑GTTAAATTCAATCCGCCGAAAGTAGAAGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 5:688711/139‑1 (MQ=255)
aCGCGCCGTCTGGTCGTGTTTATCAC‑GTTAAATTCAATCCGCCGAAAGTCGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCAt < 7:1019426/140‑1 (MQ=255)
gcgcGGTCTGGTCGTGTTTATCAC‑GTTAAATTCAATCCGCCGAAAGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCa < 6:87425/140‑1 (MQ=255)
gcgcCGTCTGGTCGTGTTTATCAC‑TTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCa < 3:194595/140‑1 (MQ=255)
gcgcCGTCTGGCCGTGTTTATAAC‑GATAAATTCAATCCGCCGAAAGTAGACCGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCa < 8:249403/140‑1 (MQ=255)
ccGTCTGGTCGTGTTTATCAC‑GTTAAATTCAATCCGCCGAAAGTACAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 2:667571/140‑1 (MQ=255)
ccGTCTGGTCGTGTTTATCAC‑GTTAAATTAAATCCGCCGACAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 4:219726/140‑1 (MQ=255)
tCTGGTCGTGTTTATCAC‑GTTAAATTCAATCCGCCGAAAGTAGCAGGCAAAGACGACGTTACCGGTGAAGAACAGACTCCCCGTAAAGACGATCAGGAACAGCCCGTACGTAAACGTCTGGTTGAATACCATCAGATgct > 6:688711/1‑138 (MQ=255)
tGGTCGTGTTTATAAC‑GTTAAATTAAATACGCCGAAAGTAGAATGCAAAGACGACGTTACCGGTGAAGAACAGACTACCCGTAAAGACGATCAGGAAGAGACCGTACATAAACGTCTGGTTGAATACCATCAGATGACTg > 3:486125/1‑140 (MQ=255)
tCGTGTTTATCAC‑GTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCAc < 4:758781/140‑1 (MQ=255)
gtgtTTATCAC‑GTTAAATTAAATCCGCCGAAAGTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCg < 4:789977/140‑1 (MQ=255)
gtgtTTATCAC‑GTTAAATACAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCg < 8:951628/140‑1 (MQ=255)
tgtTTATCAC‑TTTAAATACAAGCCGCCGAAAGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGc < 1:864474/140‑1 (MQ=255)
tgtTTATCAC‑GTAAAATTCATACCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGc < 2:864287/140‑1 (MQ=255)
gttATAAC‑GTTAAATTAAATACGCCCAAAGTAGCAGGCAAAGACGACGTTACCGGTGAAGAACAGACAACCCCTAAAGCCCATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTTCACCGCTg > 8:824277/2‑140 (MQ=255)
ttttCAC‑GTTAAATTAAAGCCGCCGATATTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGa < 5:225233/137‑1 (MQ=255)
ttATCAC‑GTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGa < 2:577663/140‑1 (MQ=255)
aTCAC‑GTTAATTTAAAACCGCCTAAAGTACAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATc < 3:751115/140‑1 (MQ=255)
cAC‑GTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGGAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCgg > 1:461923/1‑140 (MQ=255)
cAC‑GTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCgg > 5:199095/1‑140 (MQ=255)
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GCGTACCATTCCGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAC‑GTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGG > NZ_CP022686/4056812‑4057090
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
