Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F2 I0 R1
|
252 |
7301.5 |
9636800 |
98.5% |
9492248 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,056,951 |
C→A |
15.2% |
H134N (CAC→AAC) |
adk → |
adenylate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,056,951 | 0 | C | A | 15.2%
| 273.0
/ 4.4
| 176 | H134N (CAC→AAC) | adk | adenylate kinase |
| Reads supporting (aligned to +/- strand): ref base C (31/98); new base A (26/8); total (69/107) |
| Fisher's exact test for biased strand distribution p-value = 2.97e-08 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 178 total aligned reads displayed.
GCGTACCATTCCGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGA > NZ_CP022686/4056812‑4057086
|
gcgTACCATTCCGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATc < 7:1035964/140‑1 (MQ=255)
aCCATTCCGCAGGCAGCCGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGt > 6:295632/1‑140 (MQ=255)
aCCATTCCGCAGGCAGACGCGAGGAAAGAAGCGGGCATCAATGTGGATTACGTTCTGGAATTCGACGTACCGGACGACCTGATTGTTGAACGTATCGTAGGCCGCCGCGGTCACGCGCCGGCTGGTCGTGTGTAACACgg > 5:123428/1‑139 (MQ=255)
ttCCGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTaaa > 3:351619/1‑140 (MQ=255)
ttCCGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTTTCTCgattaa > 5:46985/1‑135 (MQ=255)
cGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTGACGTTAAAt > 2:1110183/1‑138 (MQ=255)
gctggcagACGCTATGAAAGAAGCGGGCATCTATGTTGATTACGTTCTGGATTTCGACGTACCGGACGAACAGATTCTTGACCGTTTCGTATGCCGCCGCGCTCACGCGCCGTCTGGTCGTGTTTATCACGATAAATTCa < 5:1182002/137‑1 (MQ=255)
caggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTTTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTGAAATTCaa > 6:1086283/1‑140 (MQ=255)
caggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTGGTCGTGGTTTTGACGTTAAATTCaa > 4:595064/1‑140 (MQ=255)
aggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCa < 1:189350/138‑1 (MQ=255)
aggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAAt < 3:1105961/140‑1 (MQ=255)
aggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAAt < 5:346515/140‑1 (MQ=255)
ggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTTACGTTAAATTCaa > 2:421346/1‑138 (MQ=255)
ggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTAACGttaaattaaa > 2:393467/1‑138 (MQ=255)
gACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATccgcc < 8:873125/140‑1 (MQ=255)
aCGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGTAATTCGACGTACCGGACGAACTGATTGTTGACCGGATCGTAGGCCGCCGCGTTCACGCGCCGTCTTGTCGTGGTGATACCCTTAAATTCCATccgc > 2:456213/1‑138 (MQ=255)
aTGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTTACGTTAAATTAAATACGCCCAAAGt > 5:1015128/1‑140 (MQ=255)
gAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGt < 2:1026683/138‑1 (MQ=255)
gAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGAACGTATCGTAGGCCGCCGCGTTCACGCGACGTATGGTCGTGGTTATCTCTTTAAATTCAATCCGCCGAAAGTAg < 4:482922/140‑1 (MQ=255)
aaaGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTTAATTGAATACGCCGACAGtt > 2:1011010/1‑137 (MQ=255)
aagCGGGCATCAATGTTGATTACGGTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATAACGTTAAATTCAATGCGCCGAAAATATCAGGc > 4:1152129/1‑140 (MQ=255)
gCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTAGTGTTTATAACCTTTAAATGAATCCGCCGAAAGTAGAAGGCaa > 4:1047001/1‑140 (MQ=255)
tttGTTTACTTTCTGTATTGAGACGTACCGGACGAACTGATTGTTGCCCGTATCTTCGGCCGCCGCGTGCACGCGCGGTCTGGTCGGGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTAc < 6:863310/139‑1 (MQ=255)
gTTGATTACGTTGTTGAATGCGCCGAACCGTACGAACTGATTGTTGACCGTATCGGAGGCCGCCGCGTTCACGGGCCGGCTGGGCGGGTTAATCACGTTAAATTCAATCCGCCGAAATTAGAAGGCAAAGACGACGTTAc < 7:125629/140‑1 (MQ=255)
gTTGATTACGTGCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTAc < 4:269444/140‑1 (MQ=255)
gATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCGGGTCGTGTTTATCACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCgg > 4:305706/1‑140 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATACGCCGAAAGTATAAGGCAAAGACGCCGTTACCGGt > 7:166034/1‑140 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGGTAAAATAAATCCGCCGAAAGGAGAAGGGAAAGACGCCGTTACCggg > 7:535548/1‑139 (MQ=255)
aCGTTAGGGAATTCGACGAACCGGACTAACTTAGTGTTGCCCGTCTCGTCGGCCGCCGCGTGCACGCGCCGTCTGGTCGTTTTTATCACGTTTGATTCAATCCGCCGAAAGTAGACGGCAAAGACGACGTTACCGGTgaa < 5:733598/140‑1 (MQ=255)
gTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGACGTCTGGTCGTGGTTATCACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGGTACCCGTgaata > 8:220745/1‑138 (MQ=255)
ttCTGGAATTCGACGTACCGCACTAACTGATTGTTGCCCGTTTCGTTGGCCGCCGGGTTCACGCGCCGTCGGGTCGTGTTTATCAGGTTAAATTCAATCCCCCTAAAGTAGAAGGAAAAGACGACGTTACCGGTgaagaa < 6:46870/140‑1 (MQ=255)
tCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATccgcc < 1:771891/102‑1 (MQ=255)
tCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATccgcc > 2:771891/1‑102 (MQ=255)
tcgAATTCGACGTACCGGACTAACTGATTGTTGACCGAATCGTAGGCCGCCGCGTTCACGCGCCGTATGGTATTGTTTAACAAGTGAAATTCAATCCGCCCAAAGTAAAACGCAAACACGACCTTACCCGTgaagaaa > 2:310684/3‑137 (MQ=255)
tGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTTGTCGTGTTTTTAACGTTAAATTAAATCCGCCGAAAGTTGAAGGCAAATACGACGTTACCGGTGAAGAACTg > 4:853036/1‑140 (MQ=255)
tGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACCTTAAATTATATCCGCCTAAAGTAGAAGGCAAATAAGACGTTACCGGTGAAGAAc > 2:896956/1‑138 (MQ=255)
taaTTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTg < 1:393467/137‑1 (MQ=255)
aaTTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACCGACt < 8:824052/140‑1 (MQ=255)
aCGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATACGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTAccc > 2:490494/1‑138 (MQ=255)
cGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCCTTCACGCGCCGTCTGGTCGTGTTTATGAAGTTAAATTAAATACGCCGAAATTATAAGGCAAATACGACGTTACCGGTGAATCACATACTACCCGTa > 3:876300/1‑140 (MQ=255)
ccGGACTAAGTGTTTGTTCACCTTATGGTAGGCCGCCGCGTTCCCGTGCCGTTTGGTGGTTTTTATCACGTTAAATTCAATCTGCCTAATTTCGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTaaa < 1:289751/138‑1 (MQ=255)
ccGGACTAACTGTTTGTTGACCGTAGCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 5:711351/140‑1 (MQ=255)
ccGGACTAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 6:1024647/140‑1 (MQ=255)
ccGGACGAAGTTTTTGTTGTCGGTTTCGTAGGCCGCCGGGTTAAGGCGCAGTCTGGTTGTGTTTATCAGGTTAATTTAAATCCGCCGAATGTAGAAGGAATAGACGTCGTTACCGGTGAAGAACTGACTTCCCGTAAAGa < 4:548886/140‑1 (MQ=255)
ccGGACGAACTTATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 4:490058/140‑1 (MQ=255)
ccGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTTTTTATCACGTAAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 4:178228/139‑1 (MQ=255)
actaaCTGATTGTTTACCGTATCGTCGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACTTTAAATTCAATCCGCGTAAAGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 5:790642/137‑1 (MQ=255)
aCGAACTTTGTGTTGACCGTATCGTAGGCCGCCGCGTGCAGGCGCTGTCTGGTCGTGTTTATCAGGTTAAATTCAATCCCCCGAAATTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTCCCCGTACAGACGAt < 4:889321/140‑1 (MQ=255)
aCGAACTGAGTGTTGACCGTATCGTAGGCCGCCGGGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTATAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 3:493279/140‑1 (MQ=255)
cGAACTGCTGGTTGACCGTAGCGTAGCCCGCGGCGGTCACGCGCCGTCGGGTCGTTTTTATCACGTTAAATTAAATCCGCCTAAAGTCGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGagc < 8:699074/140‑3 (MQ=255)
cGAACTGATTTTTGACTGTATCGTCGGCCGCCGCGTTCACGCGCGGTCTGGTCGTGTTTATAACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATc < 4:750038/140‑1 (MQ=255)
aCTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTAACGGTGAAGAACTGACTACCCGTAAATACGATCAgg > 4:955378/1‑140 (MQ=255)
ttaTTGTTCACCGATTGGTTGGCCGCCGCGTTCAGGCGCCGTCTGGTTGTTTTTATCACGTTAAATACAAACCGCCTAAAGTAGAAGTAAAAGACGACTTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGaa < 5:629293/138‑1 (MQ=255)
tttgttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGaa < 1:1175038/137‑1 (MQ=255)
aTTGTTGACCGTATCGTAGGCCGCCGCGTTCAAGCGCCGTCTGGTCGTGTTTTTAACGTTAAATTCAATACGCCGCAAGTAGAAGGCAAAGCCGCCGTTAACGGTGAAGAAAGGACATCCCCTAAAGACGCTCAGGAaga > 8:401836/1‑140 (MQ=255)
ttatgACCTTATCGTAGGCCGCCGCTGTCACGCGCCGGCGGGGCGTGTTGCTCACGTTAAATGCAATCGGCCGAAAGTAAAAGGCAATGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGCTCAGGAAgaga < 8:905873/137‑1 (MQ=255)
tgttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTCACGTTAAATTAAATCCGCCGAAATTAGAAGGCAAATCCGCCGTTACCGGTGGAGAACTGACTACCCGTAAATACGATCAGGAagagc > 4:604529/1‑139 (MQ=255)
ttgACCGTATGGTTGGCCGCCGCGTTAACGCGCCGGCGGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGAcc < 7:143036/140‑1 (MQ=255)
ttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTAACGGTTAATTAAATACGCCGCAAGTAGAAGGCAAAGACGACGTTAACGGGGAAGAACTGACTACCCCTAAAGACGATCAGGGagagc > 1:465122/1‑137 (MQ=255)
ttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACCTTAACGGTGAAGCACAGACTAACCGTAAAGACGATCAGGAATAGAcc > 4:442706/1‑140 (MQ=255)
tgtaCCGTATCGTAGGCGGCCTGGTTCACGCGCCGTCTGGTCGGGTTTATCACTTTAAATTCAATCCGCCGAAAGTACAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGAcc < 8:448585/137‑1 (MQ=255)
acaggTATCGTAGGCCGCCGCGTTCACGCGCGGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgt < 7:702634/136‑1 (MQ=255)
ccGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTGTATAACGGTTAATTAAAACCGCCCAAAGTATAATGCAAAGACGCCGTTAACGGGGAAGAACTGACAACCCGGAAACACGATCAGGAATAGCCcgc > 2:1070911/1‑137 (MQ=255)
ccGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATCACGTTAAATTCAATCCGCCGAAATTAGAAGGCAAATACGACGGTACCGGTGAAGACCTGGCTACCCGGAAAGACCATCACGAAGAGACcgg > 2:996323/1‑137 (MQ=255)
tgggCCGCCTCGGTCCCGCGCCGTCGGGGGGTGTTTATCATGTTAAATTAAATCGGCGGAACTGAGAAGGCAAAGACGACGTTACCGGGGTAGAACTGACTAGCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGt < 8:1082371/138‑1 (MQ=255)
tAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTGACGTTTAATTAAATACGCCGAAAGTTGAAGGCAAATACGACGGTTCCGGGGGAGAAAAGAAAACCCGTAAAGACGATAAGGAAGATACCGTAAGTaaaa > 2:419324/1‑137 (MQ=255)
tggCCGCCGCGTTCAGGCGCGGTCTGGTGGTGTTTATCAGGTTAAATTCAATCCGCCGAAAGTATATGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 3:289147/139‑1 (MQ=255)
tggCCGCCGCGTTAACGCTCGGTCTGGTTGTGTTTATCACGTAAAATTCATTCCGCCGAAAGTATAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 8:954657/139‑1 (MQ=255)
cggCCGCCGCGTGCCCGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 3:869506/139‑1 (MQ=255)
aGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 4:859507/140‑1 (MQ=255)
aGGCCGCCGCGTCCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTCAATCCGCCTAAAGTCGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 8:553660/140‑1 (MQ=255)
cccccgcGTTCACCCGCCGTCGGGTCGTGTTAATCCTGTAAAATAAAAACCCCCGAACGTAGCAGCCAATGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCt < 1:582677/135‑1 (MQ=255)
cgccgcGTTCACGCGCCGTCTGGTCGTGGTTATAACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGCCGTTTCCGGGGAAGAACTGACAACCCGTAAAGACGATCAGGAAGAGCCCGTACGTAACCGTCgggg > 8:1116799/1‑139 (MQ=255)
cgccgcGTTCACGCGCCGTATGGTAGTGTTTATAACCTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGCCGTTTCCGGGGAATAACGGTCGACCCCGACAGCCGAGCCGGAAGAGACCGTCCCGAAACGtagggt > 8:377011/1‑135 (MQ=255)
cgccgcGTTCACGCGCCGGCTGGTCGTGTTTATCACGTTTAAATCAATACGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGGGCAGAAATGACAACCCGGAAAGACGTACCGGAAGAGACCGGACGGAAACggcgggg > 8:535880/1‑134 (MQ=255)
gccgcGTTCACGCGCCGGCTGGTCGTGGTTATGACGTTAAATTCAATCCGCCGCAAGTAGAACGCAAAGCCGACGGTACCGGTGAAGAACGGCCGACCCGTAAAGCCGATCAGGCAGAGACCGTAAGTAAACGTCTGGtt > 4:450372/1‑140 (MQ=255)
ccgcGTTCACGCGCCGTCGGGGCGGTTTTATCTCTTTAAATTCAACCCCCCGAAAGTCGATGGCAACCACGACGTTCCCGGGGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTg < 7:302663/140‑1 (MQ=255)
ccgcGGTCCGGCGCCGTCTGGGCTTTTTTATCACGTTAATTTCAATCCGCCGAAATTCTAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATAAGGAAGAGACCGTACGTAAACGTCTGGt < 1:996442/138‑1 (MQ=255)
gtttCACTGGCCGGCTGGTCGTTTTTATCACGTTAAATTCAATCGGCCTCATTTACAAGGAAAAGTCGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGa < 2:718456/136‑1 (MQ=255)
ggTTCACGCGCCATCTGTTCGTGTTTATCACGTTAAATTCAATCCGCAGAAATTAGAAGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 3:787298/139‑1 (MQ=255)
cgTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 4:1954/140‑1 (MQ=255)
cgTTCACGCGCCGGCTGGTCGTGTTAATCACGTTAAATTAAATCCGCCGAAAGTAGACGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 7:461293/140‑1 (MQ=255)
ttCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 2:1151344/138‑1 (MQ=255)
ttCACGCGCCGTCTGGTCGTGGTTATCCCGTTAAATTCAATCCGCCGAAAGTAGACTGCAAATACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGAAGATCAGGAAGAGACCGTTCGTCAACGTCTGGTTGTATAc > 6:353024/1‑140 (MQ=255)
tccACGCGCCGTCTGGGCTTGTTTATCACGTAAAATTCAATCCGCCGAAAGTAGAAGGCAATGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATAc < 7:62015/138‑1 (MQ=255)
ccgcgCCGTCTGGTGGTGTTTATCACTTTAATTTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCAt < 6:1058888/139‑1 (MQ=255)
ccgcgCCGTCTGGGCGTGTTTATCACTTTAAATTCAATCCGCCGAAATTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCAt < 8:782274/139‑1 (MQ=255)
gcgcCGTCTGGGCGTGTTTATCACGTTAAATTCAATCCGCCGAATGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCa < 7:885981/140‑1 (MQ=255)
cgcCGACTGGTCTTGTGTCACACTTTAAATTCAATCCGCCGATTGTATAAGGCAATCACGACGTTACCGGTGAAGCACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAg < 6:1003073/140‑1 (MQ=255)
ccGTCTGGTCTTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 8:505741/140‑1 (MQ=255)
ccGTCTGGGCGTTTTTATAACTTTAAATTCAATCCGCCGAATGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 7:1088963/140‑1 (MQ=255)
cGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGCAGGCAAAGACGCCGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGCCCGTACGTAAACGTCTGGTTTAATACCATCAGATg > 4:706881/1‑140 (MQ=255)
gTCTGGTCGTTTTTATCTCTTTAAATTAAATCCGCCTAAATTATAAGCAAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 1:1070911/138‑1 (MQ=255)
tCTGGTCGTGGTTATCACGGTAAATTCAATCCGCCGAAAGTAGAATGCAAAGACGACGTTACCGGTGAAGAACTGAATACCAGTAAAGACGATCAGGAAGAGACCGTACGTAAACTTCTGGGTGAATACCATAAGATGAc > 6:39462/1‑140 (MQ=255)
tCGTGTTTATCACGTTAAATTCAATCCTCCCAAAGATTAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGc < 1:960777/138‑1 (MQ=255)
gcGTTTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCAc < 3:982232/139‑1 (MQ=255)
tttATCAAGTTAAATTCATTCCGCCGAAAGTAGATGGCAAAGACGACGTTCCCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGc < 2:1199450/138‑1 (MQ=255)
tttATAACGTTAAATTCAATCCGCCGAAAGTAGAATGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCATGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCATATTACTGAACCGcgg > 6:612641/1‑138 (MQ=255)
tttATAACGTTAAAATAAATCCGACGAAAGTAGAAGGCAAAGACGACGTTACCGGTTAAGAACTGAATAACAGTAAAAACGATAAGGAATAGACAGTACGTAAAAGTCTGGTTGAATAACATCAGATGACTGccactctg > 6:405165/1‑133 (MQ=255)
ttATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGa < 6:958933/140‑1 (MQ=255)
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GCGTACCATTCCGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGA > NZ_CP022686/4056812‑4057086
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
