Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F35 I0 R1
|
304 |
9232.4 |
10623078 |
98.3% |
10442485 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,184,330 |
G→T |
15.7% |
F64L (TTC→TTA) |
rplO ← |
50S ribosomal protein L15 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,184,330 | 0 | G | T | 15.7%
| 411.0
/ 21.2
| 225 | F64L (TTC→TTA) | rplO | 50S ribosomal protein L15 |
| Reads supporting (aligned to +/- strand): ref base G (118/60); new base T (2/43); total (121/104) |
| Fisher's exact test for biased strand distribution p-value = 4.30e-15 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 225 total aligned reads displayed.
CTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACAACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCC > NZ_CP022686/2184194‑2184465
|
cTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACAACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCAGTACGAGAAGTGAAGCCGAAt > 5:277026/1‑140 (MQ=255)
tttCGCGCACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACAACACCGCCATCTACTTTAGCCAGGTCAGACAGACGAACTTCGCCTGTAATCGCTGCTTTACGAGAAGTGAAGCCCAAtt > 6:1156118/1‑140 (MQ=255)
tttCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACAACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAAtt > 8:1220427/1‑140 (MQ=255)
caaCTCGATCTGTATACCTATAATGTTCCCCTCTTTCAGCGTGTTCCGGTCTAAAACACCGCTTTTTACTTTAGCCTGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGATAAGTGAAGCCTAATTTCGGCa < 6:744446/139‑1 (MQ=255)
tctaTCTGTATACCGATAATGTTAGCCGCTTTCAGGGTGTTCAGGTCAACAACACCGCCTTCTACTTTAGCCCGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCTAATTTCGGCAgacg < 6:142053/137‑1 (MQ=255)
tCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACAACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAgacg > 2:486963/1‑140 (MQ=255)
ggATCTGGATACCGATATTGTTAGCCGCTTTCTGCGTGTTCAGGGCTACAACCCGGCCTTCTACTTTACCCAGGCCAGCCAGACGAAGTTCGGCTGTAATCGCTGCTTTACGAGACGTGAAGCCGAATTTCGGCAgacga < 5:323216/139‑1 (MQ=255)
cGATCTGGATACCGATATTTTAAGCCGCTTTCAGCTTGTTACGTCCTACAACACCGCATTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTTAAGCCGAATTTCGGAAgacga < 2:1375420/140‑1 (MQ=255)
aTACCTATAATGTTAGCCGCTTTCCGCGTGTTCTGGTATACAACACCGCATTCTAATTTAGCCAGGTCACACCGACGAACTTCGGCTGTAATCGCTGCTTTACGACAAGTGAAGCCGAATTTCGGCAGACGACGGTACag < 2:1092125/140‑1 (MQ=255)
accctctAATGTTAGCGGATTTCAGTGTGTACTGGTCTACAACACCGCCTTCTACTTTAGCCTGGTCAGACAGAGCAAATTCGGCTGAATTCGCTGGTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGGACa < 4:285147/132‑1 (MQ=255)
aacggATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCAACAACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACaga < 2:33295/136‑1 (MQ=255)
aaCCGATAATGTTCGCCGCTTTCCGGGTGTTCTGGTCTACAACCCCGCCTTCTCATTTAGCCTGTCCAGACCGACCAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCTAATTTCGGCAGACGACGGTACaga < 6:294031/139‑1 (MQ=255)
aaCCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGGCTACAACACCGCCTTCTACTTTACCCCGGTCAGACCGCCTAACTGCGGCTGTATTCGCTGCTTTACGAGAAGTGAAGCCTAATTTCGGCAGACGACGGTACaga < 2:63868/139‑1 (MQ=255)
gATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACAACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAgg > 4:567362/1‑138 (MQ=255)
aaTGTTAGCCGCTTTCAGCGTGTTCAGGTCTACCACACAGCCTTCTACTTTAGCCATGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGGGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCAt > 4:1016399/1‑138 (MQ=255)
gTTAGCGGCTTTCCGCGTGTTCTGGTCTACACCACCGCCTGCTCCTTTACCCAGTGCAGCCCCACTCACTTCGGCTGTAAGCGCTGCTTTACGAGAAGTGAAGCCGACTTGCGGCAGACGACGGTACAGAGGCATCTGac < 7:520597/140‑1 (MQ=255)
ttcgCCGCTTTCAGCGTGTTCAGGTCTACAACACCGCCTTCTACTTTAGCCCGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGACGCCTAATTTCGGCAGACGACGGTACAGAGGCATCTGacc < 1:1050652/137‑1 (MQ=255)
gtcgCCGCTTCACGCGGGTTCCGGCCAACAACACCGCCTTCTACTTTAGCAAGGTCAGACAGACTAACTTCGGCTGTAATCGCTGCTTTACTAGACGTGAAGCCGAATTGCGGCATACGACGGTACAGAGGAATCTGacc < 8:825619/137‑1 (MQ=255)
aGCCGCTTTCAGCGTGTTCAGTTCTACAACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCCGACGACGGTACAGAGGCATCTGaccac > 7:299624/1‑140 (MQ=255)
aGCCGCTTTCAGCGTGTTCAGGTCTACACCCCCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGACGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGaccac > 8:1103664/1‑140 (MQ=255)
aGCCGCTTTCAGCGTGTTCAGGTCTACACCACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGCAGCCTAATTTCGGCAGACGACGGTACAGAGGCATCTGacccc > 5:436425/1‑138 (MQ=255)
aGCCGCTTTCAGCGTGTTCAGGTCTACAACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGaccac > 2:1141170/1‑140 (MQ=255)
aGCCGCTTTCAGCGTGTTCAGGTCTACAACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGaccac > 5:479448/1‑140 (MQ=255)
aGCCGCTTTCAGCGTGTTCAGGTCTACAACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGaccac > 5:695475/1‑140 (MQ=255)
aGCCGCTTTCAGCGTGTTCAGGTCTACAACACATCCTTCTACTTTAGCCAGGTCAGCCAGACGAACTTCGGCTGTAATCGCTGCTGTACGAGAAGTGAAGCCGAATTTCGGCAGACTACGGGACATAGGCATCTGaccac > 7:147547/1‑140 (MQ=255)
ttttCTGGGTGTTCTGGTCTACAACCCCGCCTTCAACTTTAGCCTGGTCATCCAGACTAAATTCGGCTGTAATGGCTCCTTTACTAGAAGTGAAGCCTAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCg < 6:554031/139‑1 (MQ=255)
tttCAGCGTGTTCAGGTCTACAACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGCCGGTACAGAGGCATCTGACCACCCTCGa > 2:1057488/1‑140 (MQ=255)
tctgggtgtTCCGGTCTACAACACCGCCTTCTACTTAAGCCAGCTCAGACAGACGAACTTCGGCTGTAATCGCTTCTTTACGAGAAGTTAAGCCGAATTGCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGa < 3:872032/133‑1 (MQ=255)
gCGTGTTCAGGTCAACAACACCGCCTTCTAATTTAGCCAGGACAGAAACACGAACTTCGGCTGTAATCGCTGCTTTACGATAAGTGAAGCCTAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAAc < 3:1316116/138‑1 (MQ=255)
ttCAGGTCTACAACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACg > 2:128572/1‑140 (MQ=255)
ttCAGGTCTACAACACCGCCTTCAACTTTAGACAGGTCAGACAGACGAACTTAGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGCGGCATCTTACCACCCTCGAAACCGCGACg > 8:406966/1‑140 (MQ=255)
cAGGTCTACAACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGCCg > 3:1170229/1‑138 (MQ=255)
cAGGTCTACAACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATAGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGCCCACCCTCGAAACCGCGACg > 4:1255131/1‑138 (MQ=255)
ggTCTACAACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTaag > 2:901641/1‑138 (MQ=255)
gTCTACAACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGc > 6:668334/1‑140 (MQ=255)
cTACAACACCGCCTTCTACTTTATAAAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGCCCACCCTCGAAACCGCGACGTACGc > 4:1134407/1‑138 (MQ=255)
caacaCCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCg > 5:127228/1‑140 (MQ=255)
caacaCCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCg > 5:113234/1‑140 (MQ=255)
acacCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCccccc > 3:291728/1‑137 (MQ=255)
acacCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCg > 3:439962/1‑138 (MQ=255)
ccctccTTCTACTTTAGCCAGGTCAGACAGACTAACTTCGGCTGTAATCGCTGCTTTACGAGATGTCAAGCCGAATTGCGCCATACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAg < 7:840999/136‑1 (MQ=255)
ccGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACcgcg < 2:991577/122‑1 (MQ=255)
ccGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACcgcg > 5:996441/1‑122 (MQ=255)
ccGCCTACTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCAGCCCACCCTCGAAACCGCGACGTCCGCCACCGCCAGa > 2:961512/1‑140 (MQ=255)
cgcagtCTACTTTAGCCCGGTCAGACAGACTAACTTCGGCTGTAATCGCTGCTTTCCGAGAAGTGACGCCTAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAg < 3:761165/133‑1 (MQ=255)
cGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGaa > 7:1018164/1‑140 (MQ=255)
cGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGaa > 2:1090316/1‑140 (MQ=255)
cGCCTTCTACGTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGCCCACCCTCGAAACCGCGACGTACGCCCCCGCCAGaa > 5:84347/1‑140 (MQ=255)
gCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGa > 3:496896/1‑138 (MQ=255)
ccTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGCCGTCCGCCACCGCCAGaa > 4:1166773/1‑138 (MQ=255)
cTTCTAGTTTAGCCCGGTCAGCCAGAGTAACTTCGGCTGTAATCGCTGCTTTACGTCAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACga < 6:1055521/140‑1 (MQ=255)
cTTCTACTTTAGCCAGTTAATCCAGCCAAAATGCGTCTGTAATCGCTCCTTAACGAGAAGTGACGCCGAATTGCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACga < 6:640359/140‑1 (MQ=255)
cTTCTAATTTCGCAAGGTCCGACAGACTAACGTCGGATTTAATCGAGGCTTTACTAGACGGGAAGCCGAATTTGGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAAc < 3:1142593/138‑1 (MQ=255)
cTTCTAATTTAGCCAGGTCACACAGACGAACTTCGGATGTAATCTCTGCTTTAGGAGATGTGAAGCCTAATTTCGGCTGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAAc < 3:1340819/138‑1 (MQ=255)
ttCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCCCCGCCAGAACg > 4:794008/1‑138 (MQ=255)
tCTACTTTAGCCAGGTCAGACAGACCAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGATACCGCCACGTACGCCACCGCCAGAACgaga > 1:25993/1‑140 (MQ=255)
tACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACgaga > 4:352651/1‑138 (MQ=255)
tACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGAtt > 7:914095/1‑140 (MQ=255)
ttAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGATAAGTGAAGCCTAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTg < 1:1283046/140‑1 (MQ=255)
tAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGCCGGTACAGAGGCCTCTGACCACCCTCGAACCCGCGACGTACGCCACCGCCAGAACGAGATTTCTGa > 8:546547/1‑140 (MQ=255)
tAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGCCGTACGCCACCGCCCGAACGAGATTTCTGa > 7:136523/1‑140 (MQ=255)
tAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGa > 1:540024/1‑140 (MQ=255)
tAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGATGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACTACGGTACATCGGCATCTGACCACCCTCGAACCCGCGACGTACGCCCCCGCCAGCACGAGATTTCTgc > 2:231921/1‑139 (MQ=255)
aGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGAc > 1:852735/1‑140 (MQ=255)
aGCCAGGTATCACAGACGAACTTCGGCTGTATTCGCTGATTTACGACAAGGTACGCCTAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGAc < 2:852735/140‑1 (MQ=255)
gCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGAcc > 6:822989/1‑140 (MQ=255)
gCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTAACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTgc > 3:990015/1‑137 (MQ=255)
gCCAGGTCAGACACACGCACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGCCGACGGTACAGAGGCATCTGACCACCCTCGACACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGa > 4:1096388/1‑138 (MQ=255)
ccAGGTCAGACAGACGAACTTGGGCTGTAATCGCTGCTTTACGAGAAGTTAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCt < 1:1088428/140‑1 (MQ=255)
ccAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCt > 7:759766/1‑140 (MQ=255)
gTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTtgt > 1:1348323/1‑140 (MQ=255)
cagacagaCGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTtgt > 3:896543/1‑138 (MQ=255)
agacGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTTGTgaccc > 3:22069/1‑137 (MQ=255)
acGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTTGTgaccacgac > 5:556099/1‑140 (MQ=255)
acGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGAGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGCACGAGATTTCTGACCTTTGTgacatcgac > 7:205689/1‑140 (MQ=255)
aaCTTCGGCTTTAAGCGCTGCTTAACGACAAGGTAAGCCGAATTTCGGCTGACGACGGTACAGAGGCATCTGACCACCCTCTAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTTGTgaccacgaccac < 6:877597/140‑1 (MQ=255)
aaCTTCGGCGGTAAGCGCTTCTTTACGACATCTGAAGCCTAATTTCGGCAGACGACGGGACAGAGGCATCTGACAACCCTCGAAACCTCGACGTACGCCACCGCCAGAAAGAGATTTCTGTCCTTTGTtaccacgaccac < 8:941347/140‑1 (MQ=255)
ttCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCgg > 2:1176257/1‑140 (MQ=255)
gCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCGGtttt > 2:314892/1‑140 (MQ=255)
ttAATCGCTTCTTTCCGAGTTGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCGGTTTTa < 4:506830/137‑1 (MQ=255)
ttAATCGCTGCTTTACGATATGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCGGTTTTAcc < 5:45534/139‑1 (MQ=255)
gtattggctgctTTCGGTCAAGTGAAGACGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCAACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGCCCACCGGTTTTAcc < 6:411063/134‑1 (MQ=255)
gTAATGGCGTCTTTTCGAGAATTGATCCCTATTTTGGGCTGACGTCGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCGGTTTTAcc < 2:591367/140‑1 (MQ=255)
gTAATCGCTGCTTTACGTGATGTGACGCCGAATTTCGGAAGACGACGGTACAGAGGCATCTGACCAACCTCGAAACCGCGACGTACGCCAACGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCGGTTTTAcc < 8:1477/140‑1 (MQ=255)
gTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCGGTTTTAcc < 7:817932/140‑1 (MQ=255)
tAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAgacga > 7:782742/1‑44 (MQ=255)
tAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAgacga < 8:782742/44‑1 (MQ=255)
cGCTGCTTTACTAGATGTGATGCCGATTTTCGGTAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGAACGCCACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGc < 1:336914/140‑1 (MQ=255)
gctgctTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGcc > 5:1297036/1‑140 (MQ=255)
gctgctTAACTACAAGTGATCCCTAATTTCGGCTGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTATGCCACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGcc < 7:486478/140‑1 (MQ=255)
ggcgttACGAGATGTGACGCCTAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAg < 5:761840/136‑1 (MQ=255)
cctagaTGTGAAGCGGATTTTCGGCTGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGa < 6:483631/137‑1 (MQ=255)
acaaGTGAATCCGAATTTCGGAAGACGACGGTACATAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGAt < 4:959827/136‑1 (MQ=255)
caGTGAAGCCGAATTTCGCCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCa < 2:820834/139‑1 (MQ=255)
atgTGATGCCTATTTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATAc < 4:642821/136‑1 (MQ=255)
aaGTGACGCGGATTTTCGTCCGACGACGGTAATGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCa < 5:643906/140‑1 (MQ=255)
aaGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAACCCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCa < 8:203952/140‑1 (MQ=255)
aaGGGAAGCCGAATTTCGGAAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCa < 1:318352/140‑1 (MQ=255)
cgCCTAATTTCGGCTGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGGACGCCACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGAc < 3:1044989/137‑1 (MQ=255)
cgCCTAATTGCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGAc < 3:635805/137‑1 (MQ=255)
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CTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACAACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAACTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGATTTCTGACCTTTGTGACCACGACCACCGGTTTTACCGAGGCCAGAACCGATACCACGACCC > NZ_CP022686/2184194‑2184465
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
